Protein ID | Agabi119p4|095990 |
Gene name | |
Location | scaffold_06:2053428..2054680 |
Strand | + |
Gene length (bp) | 1252 |
Transcript length (bp) | 1062 |
Coding sequence length (bp) | 1062 |
Protein length (aa) | 354 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF01885 | PTS_2-RNA | RNA 2'-phosphotransferase, Tpt1 / KptA family | 2.9E-64 | 126 | 319 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q5EAR5|TRPT1_DANRE | tRNA 2'-phosphotransferase 1 OS=Danio rerio GN=trpt1 PE=2 SV=2 | 126 | 334 | 1.0E-43 |
sp|O14045|TPT1_SCHPO | Putative tRNA 2'-phosphotransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2C4.12c PE=3 SV=2 | 127 | 334 | 2.0E-40 |
sp|Q3ZBM7|TRPT1_BOVIN | tRNA 2'-phosphotransferase 1 OS=Bos taurus GN=TRPT1 PE=2 SV=3 | 126 | 342 | 2.0E-36 |
sp|Q8K3A2|TRPT1_MOUSE | tRNA 2'-phosphotransferase 1 OS=Mus musculus GN=Trpt1 PE=2 SV=2 | 104 | 342 | 3.0E-36 |
sp|Q86TN4|TRPT1_HUMAN | tRNA 2'-phosphotransferase 1 OS=Homo sapiens GN=TRPT1 PE=1 SV=2 | 115 | 342 | 3.0E-35 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|Q5EAR5|TRPT1_DANRE | tRNA 2'-phosphotransferase 1 OS=Danio rerio GN=trpt1 PE=2 SV=2 | 126 | 334 | 1.0E-43 |
sp|O14045|TPT1_SCHPO | Putative tRNA 2'-phosphotransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC2C4.12c PE=3 SV=2 | 127 | 334 | 2.0E-40 |
sp|Q3ZBM7|TRPT1_BOVIN | tRNA 2'-phosphotransferase 1 OS=Bos taurus GN=TRPT1 PE=2 SV=3 | 126 | 342 | 2.0E-36 |
sp|Q8K3A2|TRPT1_MOUSE | tRNA 2'-phosphotransferase 1 OS=Mus musculus GN=Trpt1 PE=2 SV=2 | 104 | 342 | 3.0E-36 |
sp|Q86TN4|TRPT1_HUMAN | tRNA 2'-phosphotransferase 1 OS=Homo sapiens GN=TRPT1 PE=1 SV=2 | 115 | 342 | 3.0E-35 |
sp|Q12272|TPT1_YEAST | tRNA 2'-phosphotransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TPT1 PE=1 SV=1 | 121 | 333 | 2.0E-23 |
sp|Q1MG28|KPTA_RHIL3 | Probable RNA 2'-phosphotransferase OS=Rhizobium leguminosarum bv. viciae (strain 3841) GN=kptA PE=3 SV=1 | 126 | 325 | 3.0E-22 |
sp|B5ZQT5|KPTA_RHILW | Probable RNA 2'-phosphotransferase OS=Rhizobium leguminosarum bv. trifolii (strain WSM2304) GN=kptA PE=3 SV=1 | 126 | 325 | 2.0E-21 |
sp|B2IZ22|KPTA_NOSP7 | Probable RNA 2'-phosphotransferase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=kptA PE=3 SV=1 | 127 | 326 | 8.0E-21 |
sp|B9JFP7|KPTA_AGRRK | Probable RNA 2'-phosphotransferase OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=kptA PE=3 SV=1 | 126 | 325 | 2.0E-20 |
sp|Q8XP22|KPTA_CLOPE | Probable RNA 2'-phosphotransferase OS=Clostridium perfringens (strain 13 / Type A) GN=kptA PE=3 SV=1 | 128 | 333 | 6.0E-19 |
sp|Q0TUT1|KPTA_CLOP1 | Probable RNA 2'-phosphotransferase OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) GN=kptA PE=3 SV=1 | 128 | 326 | 4.0E-18 |
sp|Q0SWM0|KPTA_CLOPS | Probable RNA 2'-phosphotransferase OS=Clostridium perfringens (strain SM101 / Type A) GN=kptA PE=3 SV=1 | 128 | 326 | 4.0E-17 |
sp|Q3M450|KPTA_ANAVT | Probable RNA 2'-phosphotransferase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=kptA PE=3 SV=1 | 126 | 327 | 4.0E-16 |
sp|Q48DQ3|KPTA_PSE14 | Probable RNA 2'-phosphotransferase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) GN=kptA PE=3 SV=1 | 128 | 317 | 5.0E-16 |
sp|Q8R5N7|KPTA_FUSNN | Probable RNA 2'-phosphotransferase OS=Fusobacterium nucleatum subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM 8532 / LMG 13131) GN=kptA PE=3 SV=1 | 126 | 327 | 6.0E-16 |
sp|Q87VZ5|KPTA_PSESM | Probable RNA 2'-phosphotransferase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=kptA PE=3 SV=1 | 128 | 335 | 1.0E-15 |
sp|A9B356|KPTA_HERA2 | Probable RNA 2'-phosphotransferase OS=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) GN=kptA PE=3 SV=1 | 127 | 328 | 1.0E-15 |
sp|Q7UEP2|KPTA_RHOBA | Probable RNA 2'-phosphotransferase OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) GN=kptA PE=3 SV=1 | 127 | 327 | 2.0E-15 |
sp|A5FLZ4|KPTA_FLAJ1 | Probable RNA 2'-phosphotransferase OS=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) GN=kptA PE=3 SV=1 | 129 | 318 | 7.0E-15 |
sp|Q63WX9|KPTA_BURPS | Probable RNA 2'-phosphotransferase OS=Burkholderia pseudomallei (strain K96243) GN=kptA PE=3 SV=1 | 128 | 327 | 9.0E-15 |
sp|Q7NVB8|KPTA_CHRVO | Probable RNA 2'-phosphotransferase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=kptA PE=3 SV=2 | 115 | 319 | 3.0E-14 |
sp|Q6HH75|KPTA_BACHK | Probable RNA 2'-phosphotransferase OS=Bacillus thuringiensis subsp. konkukian (strain 97-27) GN=kptA PE=3 SV=1 | 129 | 318 | 5.0E-14 |
sp|Q4K4C7|KPTA_PSEF5 | Probable RNA 2'-phosphotransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=kptA PE=3 SV=1 | 130 | 326 | 2.0E-13 |
sp|B1VP90|KPTA_STRGG | Probable RNA 2'-phosphotransferase OS=Streptomyces griseus subsp. griseus (strain JCM 4626 / NBRC 13350) GN=kptA PE=3 SV=1 | 127 | 319 | 2.0E-13 |
sp|Q8U9Z2|KPTA_AGRFC | Probable RNA 2'-phosphotransferase OS=Agrobacterium fabrum (strain C58 / ATCC 33970) GN=kptA PE=3 SV=1 | 130 | 337 | 4.0E-13 |
sp|A3DJX6|KPTA_CLOTH | Probable RNA 2'-phosphotransferase OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) GN=kptA PE=3 SV=1 | 128 | 328 | 4.0E-13 |
sp|B0C090|KPTA_ACAM1 | Probable RNA 2'-phosphotransferase OS=Acaryochloris marina (strain MBIC 11017) GN=kptA PE=3 SV=1 | 129 | 318 | 1.0E-12 |
sp|Q395F2|KPTA_BURL3 | Probable RNA 2'-phosphotransferase OS=Burkholderia lata (strain ATCC 17760 / LMG 22485 / NCIMB 9086 / R18194 / 383) GN=kptA PE=3 SV=1 | 127 | 326 | 8.0E-12 |
sp|Q9ZBX9|KPTA_STRCO | Probable RNA 2'-phosphotransferase OS=Streptomyces coelicolor (strain ATCC BAA-471 / A3(2) / M145) GN=kptA PE=3 SV=1 | 127 | 327 | 1.0E-11 |
sp|Q0T8X6|KPTA_ECOL5 | Probable RNA 2'-phosphotransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=kptA PE=3 SV=1 | 121 | 317 | 8.0E-11 |
sp|Q6DA62|KPTA_PECAS | Probable RNA 2'-phosphotransferase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) GN=kptA PE=3 SV=1 | 129 | 326 | 2.0E-10 |
sp|B7MMM2|KPTA_ECO45 | Probable RNA 2'-phosphotransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=kptA PE=3 SV=1 | 121 | 330 | 3.0E-10 |
sp|B1LDT4|KPTA_ECOSM | Probable RNA 2'-phosphotransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=kptA PE=3 SV=1 | 121 | 330 | 5.0E-10 |
sp|B2TYV0|KPTA_SHIB3 | Probable RNA 2'-phosphotransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=kptA PE=3 SV=1 | 121 | 317 | 7.0E-10 |
sp|B7LXP0|KPTA_ECO8A | Probable RNA 2'-phosphotransferase OS=Escherichia coli O8 (strain IAI1) GN=kptA PE=3 SV=1 | 121 | 317 | 9.0E-10 |
sp|A8A858|KPTA_ECOHS | Probable RNA 2'-phosphotransferase OS=Escherichia coli O9:H4 (strain HS) GN=kptA PE=3 SV=1 | 121 | 317 | 1.0E-09 |
sp|B6I2L3|KPTA_ECOSE | Probable RNA 2'-phosphotransferase OS=Escherichia coli (strain SE11) GN=kptA PE=3 SV=1 | 121 | 317 | 1.0E-09 |
sp|B7LDY6|KPTA_ECO55 | Probable RNA 2'-phosphotransferase OS=Escherichia coli (strain 55989 / EAEC) GN=kptA PE=3 SV=1 | 121 | 317 | 1.0E-09 |
sp|O29841|KPTA1_ARCFU | Probable RNA 2'-phosphotransferase 1 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=kptA1 PE=3 SV=1 | 128 | 330 | 2.0E-09 |
sp|A7ZVN0|KPTA_ECO24 | Probable RNA 2'-phosphotransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=kptA PE=3 SV=1 | 121 | 317 | 2.0E-09 |
sp|P39380|KPTA_ECOLI | RNA 2'-phosphotransferase OS=Escherichia coli (strain K12) GN=kptA PE=3 SV=2 | 121 | 317 | 2.0E-09 |
sp|B7NGY8|KPTA_ECOLU | Probable RNA 2'-phosphotransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=kptA PE=3 SV=1 | 121 | 317 | 2.0E-09 |
sp|C4ZT19|KPTA_ECOBW | Probable RNA 2'-phosphotransferase OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=kptA PE=3 SV=1 | 121 | 317 | 2.0E-09 |
sp|Q037J6|KPTA_LACC3 | Probable RNA 2'-phosphotransferase OS=Lactobacillus casei (strain ATCC 334) GN=kptA PE=3 SV=1 | 127 | 317 | 2.0E-09 |
sp|C6DJM6|KPTA_PECCP | Probable RNA 2'-phosphotransferase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) GN=kptA PE=3 SV=1 | 129 | 317 | 6.0E-09 |
sp|Q8U4K2|KPTA_PYRFU | Probable RNA 2'-phosphotransferase OS=Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=kptA PE=3 SV=2 | 128 | 295 | 1.0E-08 |
sp|Q5JFX3|KPTA_THEKO | Probable RNA 2'-phosphotransferase OS=Thermococcus kodakarensis (strain ATCC BAA-918 / JCM 12380 / KOD1) GN=kptA PE=3 SV=1 | 128 | 318 | 3.0E-08 |
sp|O28719|KPTA2_ARCFU | Probable RNA 2'-phosphotransferase 2 OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=kptA2 PE=3 SV=1 | 128 | 306 | 3.0E-08 |
sp|Q2SQM5|KPTA_HAHCH | Probable RNA 2'-phosphotransferase OS=Hahella chejuensis (strain KCTC 2396) GN=kptA PE=3 SV=1 | 136 | 327 | 5.0E-08 |
sp|O57899|KPTA_PYRHO | Probable RNA 2'-phosphotransferase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) GN=kptA PE=3 SV=1 | 128 | 295 | 9.0E-08 |
sp|B6YXF3|KPTA_THEON | Probable RNA 2'-phosphotransferase OS=Thermococcus onnurineus (strain NA1) GN=kptA PE=3 SV=1 | 128 | 318 | 1.0E-07 |
sp|Q9YFP5|KPTA_AERPE | Probable RNA 2'-phosphotransferase OS=Aeropyrum pernix (strain ATCC 700893 / DSM 11879 / JCM 9820 / NBRC 100138 / K1) GN=kptA PE=1 SV=2 | 127 | 318 | 2.0E-06 |
sp|Q02V26|KPTA_PSEAB | Probable RNA 2'-phosphotransferase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=kptA PE=3 SV=1 | 130 | 318 | 5.0E-06 |
sp|Q9I778|KPTA_PSEAE | Probable RNA 2'-phosphotransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=kptA PE=3 SV=1 | 130 | 318 | 6.0E-06 |
GO Term | Description | Terminal node |
---|---|---|
GO:0016740 | transferase activity | Yes |
GO:0003674 | molecular_function | No |
GO:0003824 | catalytic activity | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 27 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Agabi119p4|095990 MALLHRLPRDSRLPVAFLIHLSSANTRPSPSAFSRGHSIPLLSLLQARTAAGYAGAKKPNNIWKQAPPSKGPSQS SSQNDSNDHRHRKQKTEMSKKSQRSKQEGVNHRDGNGSHPKLRGTERDLPEVKLSKTLSWILRHGGAYEGLAMRE DGFVYVSDILKHSRLRTFGLTLERLKGIVQTDPKQRFSLVFERSDATRLNYTVVEGNEDENGMWLIKANQGHSIS AVKIELESILQVSDIPSGLAVHGTTRSAWNVIEKEGLSKMNRNHIHMAQGVGKDDVISGMRQSSQILIFINVQKA LDAGIKFYLSDNGVVLTDGDEHGYLKMEFIDRVEDARTRKAIEGWEGSGETVG* |
Coding | >Agabi119p4|095990 ATGGCACTACTTCATCGTTTGCCACGCGACTCTCGTCTTCCCGTTGCTTTTTTGATTCATCTAAGTTCTGCGAAT ACTCGACCTTCTCCGTCAGCCTTTTCTCGTGGACACTCGATTCCCTTGTTGTCCTTACTTCAGGCTCGAACTGCC GCAGGTTACGCGGGTGCAAAAAAACCGAATAACATTTGGAAACAAGCCCCTCCTTCTAAAGGACCTTCTCAAAGT TCATCACAAAATGATTCAAATGATCATAGACATCGAAAACAGAAGACTGAAATGTCCAAAAAATCTCAGAGGTCG AAGCAAGAAGGCGTCAACCATCGAGATGGGAATGGGTCTCACCCTAAACTTCGTGGTACAGAAAGAGATTTACCC GAAGTGAAATTGTCGAAAACTTTATCTTGGATACTACGACATGGAGGTGCATATGAAGGTTTAGCGATGCGGGAA GATGGGTTCGTGTATGTCAGCGACATCCTGAAACATAGTCGCCTACGGACATTTGGTTTGACTTTGGAGAGACTA AAAGGCATTGTCCAAACCGATCCTAAACAACGATTTTCGCTGGTTTTCGAACGGTCGGACGCAACTCGACTCAAT TATACCGTTGTTGAGGGAAATGAAGATGAGAATGGTATGTGGCTCATTAAGGCGAACCAAGGGCACTCGATTAGT GCTGTCAAAATTGAACTTGAATCTATCCTTCAGGTTTCAGATATACCTTCCGGATTGGCAGTGCACGGGACAACT CGCTCTGCTTGGAATGTCATAGAAAAGGAAGGTCTGTCAAAGATGAATAGAAATCACATACACATGGCACAAGGT GTTGGTAAGGACGATGTTATCAGCGGCATGAGACAATCATCCCAGATACTCATTTTTATCAACGTCCAAAAGGCG TTAGATGCTGGGATAAAGTTCTATTTGTCCGATAATGGGGTAGTACTCACGGATGGTGACGAACATGGATACTTG AAGATGGAGTTTATCGATAGAGTAGAGGACGCGAGAACAAGGAAAGCGATCGAGGGATGGGAGGGGAGTGGGGAG ACTGTTGGATAA |
Transcript | >Agabi119p4|095990 ATGGCACTACTTCATCGTTTGCCACGCGACTCTCGTCTTCCCGTTGCTTTTTTGATTCATCTAAGTTCTGCGAAT ACTCGACCTTCTCCGTCAGCCTTTTCTCGTGGACACTCGATTCCCTTGTTGTCCTTACTTCAGGCTCGAACTGCC GCAGGTTACGCGGGTGCAAAAAAACCGAATAACATTTGGAAACAAGCCCCTCCTTCTAAAGGACCTTCTCAAAGT TCATCACAAAATGATTCAAATGATCATAGACATCGAAAACAGAAGACTGAAATGTCCAAAAAATCTCAGAGGTCG AAGCAAGAAGGCGTCAACCATCGAGATGGGAATGGGTCTCACCCTAAACTTCGTGGTACAGAAAGAGATTTACCC GAAGTGAAATTGTCGAAAACTTTATCTTGGATACTACGACATGGAGGTGCATATGAAGGTTTAGCGATGCGGGAA GATGGGTTCGTGTATGTCAGCGACATCCTGAAACATAGTCGCCTACGGACATTTGGTTTGACTTTGGAGAGACTA AAAGGCATTGTCCAAACCGATCCTAAACAACGATTTTCGCTGGTTTTCGAACGGTCGGACGCAACTCGACTCAAT TATACCGTTGTTGAGGGAAATGAAGATGAGAATGGTATGTGGCTCATTAAGGCGAACCAAGGGCACTCGATTAGT GCTGTCAAAATTGAACTTGAATCTATCCTTCAGGTTTCAGATATACCTTCCGGATTGGCAGTGCACGGGACAACT CGCTCTGCTTGGAATGTCATAGAAAAGGAAGGTCTGTCAAAGATGAATAGAAATCACATACACATGGCACAAGGT GTTGGTAAGGACGATGTTATCAGCGGCATGAGACAATCATCCCAGATACTCATTTTTATCAACGTCCAAAAGGCG TTAGATGCTGGGATAAAGTTCTATTTGTCCGATAATGGGGTAGTACTCACGGATGGTGACGAACATGGATACTTG AAGATGGAGTTTATCGATAGAGTAGAGGACGCGAGAACAAGGAAAGCGATCGAGGGATGGGAGGGGAGTGGGGAG ACTGTTGGATAA |
Gene | >Agabi119p4|095990 ATGGCACTACTTCATCGTTTGCCACGCGACTCTCGTCTTCCCGTTGCTTTTTTGATTCATCTAAGTTCTGCGAAT ACTCGACCTTCTCCGTCAGCCTTTTCTCGTGGACACTCGATTCCCTTGTTGTCCTTACTTCAGGCTCGAACTGCC GCAGGTTACGCGGGTGCAAAAAAACCGAATAACATTTGGAAACAAGCCCCTCCTTCTAAAGGACCTTCTCAAAGT TCATCACAAAATGATTCAAATGATCATAGACATCGAAAACAGAAGACTGAAATGTCCAAAAAATCTCAGAGGTCG AAGCAAGAAGGCGTCAACCATCGAGATGGGAATGGGTCTCACCCTAAACTTCGTGGTACAGAAAGAGATTTACCC GAAGTGAAATTGTCGAAAACTTTATCTTGGATACTACGACATGGAGGTGCATATGAAGGTTTAGCGATGCGGGAA GATGGGTTCGTGTATGTCAGCGACATCGTGCGTGTATCTCTCCCAACACCTCTCACTATTCACGCTCTGTATACT AATATGACATATTTTTGAAGCTGAAACATAGTCGCCTACGGACATTTGGTTTGACTTTGGAGAGACTAAAAGGCA TTGTCCAAACCGATCCTAAACAACGATTTTCGCTGGTTTTCGAACGGTCGGACGCAACTCGACTCAATTATACCG TTGTTGAGGGAAATGAAGATGAGAATGGTATGTGGCTCATTAAGGCGAACCAAGGGCACTCGATTAGTGTACGTT GCGACCGGATAATTAAGCTGCTGTCAGCCGCTAACTACATTTATACAGGCTGTCAAAATTGAACTTGAATCTATC CTTCAGGTTTCAGATATACCTTCCGGATTGGCAGTGCACGGGACAACTCGCTCTGCTTGGAATGTCATAGAAAAG GAAGGTCTGTCAAAGATGAATAGAAATCACATACACATGGCACAAGGTGTTGGTAAGGACGATGTTATCAGCGGT ATGTGCCGTTTTTTCTGTACTTAAACCTCCGCGGCGCAATACCTTTCTAAATTTATTGACGACAGGCATGAGACA ATCATCCCAGATACTCATTTTTATCAACGTCCAAAAGGCGTTAGATGCTGGGATAAAGTTCTATTTGTCCGATAA TGGGGTAGTACTCACGGATGGTGACGAACATGGATACTTGAAGATGGAGTTTATCGATAGAGTAGAGGACGCGAG AACAAGGAAAGCGATCGAGGGATGGGAGGGGAGTGGGGAGACTGTTGGATAA |