Protein ID | Agabi119p4|095900 |
Gene name | |
Location | scaffold_06:2014677..2017006 |
Strand | + |
Gene length (bp) | 2329 |
Transcript length (bp) | 1962 |
Coding sequence length (bp) | 1962 |
Protein length (aa) | 654 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF14737 | DUF4470 | Domain of unknown function (DUF4470) | 1.7E-11 | 133 | 230 |
PF01753 | zf-MYND | MYND finger | 2.8E-05 | 72 | 100 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 46 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Agabi119p4|095900 MANDLSQSQRILGRLKSTKSGLARAVSQSATVQAVTYTGLGTAHAGSVLTRILCACSSGRDATTTSCPNIGTLLC SQCCLVRYCSERCQRRHLSRHRVFCEHELRFIRWRPNWVKERRSPQFAVSSRHPLNSLWNTSPIFNCIDLSSGIV SGDTKQTLRICFPAGSLNKLIATINCLPIDFRGHCDILLNDIDAVVINRHLILLYALLRSGRDVEESAEFATHLM YSAFLTPPCADYLKSCVAEIYGVGPGECDMSFHRSLETRGGGKLHTVQTTMGIKRPVEMAMSTYGFTKARRSHQE ALLHISDIDNRERFLMKLKPSHRLVLTHFWETGVLAPFFLNTASFNQPNRLHFSAQGEWLGHPSDANALQGWDIT AVKNTGVSLGLDPTDILGCLFFHVKSELMKFADRLQKLSVTIYFTQFDVRVLSKGICAGLLPAFEPGCFDRIDAG DLMDTLGVRDCLASLGPLVNPRSPGACILMQSRTWYHHVPGAIARGNPRLFKILMAKAKLLPRLHDRLRKANVFE TGQEITSTSLLRLIDYLDAFVDHGQPFKSFLERQGIAEMCKRLGFKHRDQNRHHPSRIGLRPRVDDNIERRRSEE VPGLCLTKEEFYDLFVLGSAEFPTRFIEFEPLPLMLDDAASTARQTLISTNSV* |
Coding | >Agabi119p4|095900 ATGGCTAACGACCTTTCACAGTCCCAAAGGATTCTTGGTCGACTGAAGAGCACGAAGAGTGGACTTGCTAGAGCT GTCTCTCAATCTGCAACTGTACAGGCTGTGACTTACACTGGCCTGGGGACGGCGCATGCTGGTAGCGTTCTAACA AGAATTCTATGCGCCTGTTCTTCTGGGCGTGATGCTACGACGACCTCATGCCCTAACATTGGGACGTTACTTTGC TCTCAGTGCTGTTTGGTCCGATACTGCTCGGAACGTTGTCAGCGTCGACACTTGTCCAGACACCGCGTCTTCTGC GAGCATGAACTCAGGTTCATACGATGGCGCCCAAACTGGGTCAAGGAGAGGCGTTCACCGCAATTTGCGGTATCT TCAAGGCACCCTTTGAATTCACTTTGGAATACCAGTCCCATCTTCAATTGCATTGACCTAAGTTCGGGAATAGTG TCTGGTGATACGAAGCAGACCCTCAGGATCTGCTTCCCTGCGGGAAGCCTCAATAAGCTAATTGCAACCATCAAC TGCCTGCCTATAGACTTCCGAGGCCATTGTGATATTCTTTTGAACGACATTGACGCGGTTGTGATTAATCGGCAT CTCATCTTACTTTACGCGCTTCTTCGTTCTGGTCGAGACGTAGAGGAATCTGCTGAATTCGCGACTCATTTGATG TATTCGGCCTTCCTAACGCCGCCATGCGCTGACTATCTCAAGAGCTGCGTAGCGGAGATTTATGGGGTTGGACCT GGAGAATGTGATATGTCGTTCCATCGAAGCCTAGAGACGAGGGGTGGAGGAAAGTTGCATACGGTGCAAACGACT ATGGGAATTAAACGACCAGTTGAAATGGCAATGTCTACATATGGCTTCACGAAAGCGCGAAGAAGTCATCAAGAA GCTCTGCTTCACATTTCGGATATCGACAATCGGGAACGGTTCTTAATGAAACTAAAACCGTCTCACCGTTTGGTA TTAACGCATTTTTGGGAGACTGGTGTGCTTGCGCCGTTCTTCTTGAATACTGCTTCCTTCAATCAACCGAATCGG CTTCACTTCTCAGCTCAAGGGGAATGGCTGGGTCATCCTAGTGATGCGAACGCGCTCCAAGGATGGGATATCACT GCGGTCAAGAATACCGGAGTTAGTCTTGGCCTCGATCCTACTGATATCCTCGGATGTCTTTTCTTCCATGTCAAG TCCGAGTTGATGAAGTTTGCTGATCGCTTACAAAAGCTCTCGGTGACCATTTATTTCACTCAATTTGACGTGCGG GTTCTCTCGAAAGGGATATGCGCTGGTCTCCTTCCCGCCTTTGAACCGGGATGTTTCGACCGTATCGATGCTGGA GATTTGATGGATACTCTAGGAGTCCGGGATTGTTTGGCATCTTTGGGCCCGTTGGTCAATCCTAGAAGTCCCGGA GCTTGTATACTCATGCAGTCAAGGACTTGGTACCATCACGTTCCCGGTGCTATAGCGCGTGGCAATCCTCGCCTT TTCAAAATTCTCATGGCAAAAGCGAAATTGCTTCCTAGATTGCACGATAGATTGAGAAAGGCGAATGTATTTGAG ACAGGGCAAGAGATAACCTCAACCTCGCTGTTACGGTTGATAGACTATTTGGATGCCTTTGTGGATCACGGTCAA CCTTTTAAATCGTTCTTGGAAAGACAAGGAATCGCAGAGATGTGCAAGCGCCTAGGATTCAAGCATAGAGATCAA AATCGCCATCATCCTTCGCGTATTGGTTTAAGACCTCGAGTTGATGATAATATCGAAAGGAGACGATCTGAAGAA GTACCTGGACTTTGTTTGACGAAAGAAGAATTCTATGATCTATTTGTCCTGGGAAGTGCTGAATTCCCGACGCGG TTCATTGAATTCGAACCTCTACCATTGATGTTAGATGATGCAGCCAGTACTGCGAGGCAGACGCTGATATCCACC AACTCAGTCTAA |
Transcript | >Agabi119p4|095900 ATGGCTAACGACCTTTCACAGTCCCAAAGGATTCTTGGTCGACTGAAGAGCACGAAGAGTGGACTTGCTAGAGCT GTCTCTCAATCTGCAACTGTACAGGCTGTGACTTACACTGGCCTGGGGACGGCGCATGCTGGTAGCGTTCTAACA AGAATTCTATGCGCCTGTTCTTCTGGGCGTGATGCTACGACGACCTCATGCCCTAACATTGGGACGTTACTTTGC TCTCAGTGCTGTTTGGTCCGATACTGCTCGGAACGTTGTCAGCGTCGACACTTGTCCAGACACCGCGTCTTCTGC GAGCATGAACTCAGGTTCATACGATGGCGCCCAAACTGGGTCAAGGAGAGGCGTTCACCGCAATTTGCGGTATCT TCAAGGCACCCTTTGAATTCACTTTGGAATACCAGTCCCATCTTCAATTGCATTGACCTAAGTTCGGGAATAGTG TCTGGTGATACGAAGCAGACCCTCAGGATCTGCTTCCCTGCGGGAAGCCTCAATAAGCTAATTGCAACCATCAAC TGCCTGCCTATAGACTTCCGAGGCCATTGTGATATTCTTTTGAACGACATTGACGCGGTTGTGATTAATCGGCAT CTCATCTTACTTTACGCGCTTCTTCGTTCTGGTCGAGACGTAGAGGAATCTGCTGAATTCGCGACTCATTTGATG TATTCGGCCTTCCTAACGCCGCCATGCGCTGACTATCTCAAGAGCTGCGTAGCGGAGATTTATGGGGTTGGACCT GGAGAATGTGATATGTCGTTCCATCGAAGCCTAGAGACGAGGGGTGGAGGAAAGTTGCATACGGTGCAAACGACT ATGGGAATTAAACGACCAGTTGAAATGGCAATGTCTACATATGGCTTCACGAAAGCGCGAAGAAGTCATCAAGAA GCTCTGCTTCACATTTCGGATATCGACAATCGGGAACGGTTCTTAATGAAACTAAAACCGTCTCACCGTTTGGTA TTAACGCATTTTTGGGAGACTGGTGTGCTTGCGCCGTTCTTCTTGAATACTGCTTCCTTCAATCAACCGAATCGG CTTCACTTCTCAGCTCAAGGGGAATGGCTGGGTCATCCTAGTGATGCGAACGCGCTCCAAGGATGGGATATCACT GCGGTCAAGAATACCGGAGTTAGTCTTGGCCTCGATCCTACTGATATCCTCGGATGTCTTTTCTTCCATGTCAAG TCCGAGTTGATGAAGTTTGCTGATCGCTTACAAAAGCTCTCGGTGACCATTTATTTCACTCAATTTGACGTGCGG GTTCTCTCGAAAGGGATATGCGCTGGTCTCCTTCCCGCCTTTGAACCGGGATGTTTCGACCGTATCGATGCTGGA GATTTGATGGATACTCTAGGAGTCCGGGATTGTTTGGCATCTTTGGGCCCGTTGGTCAATCCTAGAAGTCCCGGA GCTTGTATACTCATGCAGTCAAGGACTTGGTACCATCACGTTCCCGGTGCTATAGCGCGTGGCAATCCTCGCCTT TTCAAAATTCTCATGGCAAAAGCGAAATTGCTTCCTAGATTGCACGATAGATTGAGAAAGGCGAATGTATTTGAG ACAGGGCAAGAGATAACCTCAACCTCGCTGTTACGGTTGATAGACTATTTGGATGCCTTTGTGGATCACGGTCAA CCTTTTAAATCGTTCTTGGAAAGACAAGGAATCGCAGAGATGTGCAAGCGCCTAGGATTCAAGCATAGAGATCAA AATCGCCATCATCCTTCGCGTATTGGTTTAAGACCTCGAGTTGATGATAATATCGAAAGGAGACGATCTGAAGAA GTACCTGGACTTTGTTTGACGAAAGAAGAATTCTATGATCTATTTGTCCTGGGAAGTGCTGAATTCCCGACGCGG TTCATTGAATTCGAACCTCTACCATTGATGTTAGATGATGCAGCCAGTACTGCGAGGCAGACGCTGATATCCACC AACTCAGTCTAA |
Gene | >Agabi119p4|095900 ATGGCTAACGACCTTTCACAGTCCCAAAGGATTCTTGGTCGACTGAAGAGCACGAAGAGTGGACTTGCTAGAGCT GTCTCTCAATCTGCAACTGTACAGGCTGTGACTTACACTGGCCTGGGGACGGCGCATGCTGGTAGCGTTCTAACA AGAATTCTATGCGCCTGTTCTTCTGGGCGTGATGCTACGACGACCTCATGCCCTAACATTGGGACGTTACTTTGC TCTCAGGTAAGGTTGCACACTTGTCCATGTCCAAGCAAAATTTATTCGCATCTCATTAGTGCTGTTTGGTCCGAG TACGCCCTCGCCGCTCTCGTCCCTTGTCACCTCGAGTCATTCACCCAACTAGTACTGCTCGGAACGTTGTCAGCG TCGACACTTGTCCAGACACCGCGTCTTCTGCGAGCATGAACTCAGGTTCATACGATGGCGCCCAAACTGGGTCAA GGAGAGGCGTTCACCGCAATTTGCGGTATCTTCAAGGCACCCTTTGAATTCACTTTGGAATACCAGTCCCATCTT CAATTGCATTGACCTAAGTTCGGGAATAGTGTCTGGTGATACGAAGCAGACCCTCAGGATCTGCTTCCCTGGTAA GTCACTAGCCATACTTATTAGGCCTTGAAATAACGTTTGGGTTGCGGATGCAGCGGGAAGCCTCAATAAGCTAAT TGCAACCATCAACTGCCTGCCTATAGACTTCCGAGGCCATTGTGATATTCTTTTGAACGACATTGACGCGGTTGT GATTAATCGGCATCTCATCTTACTTTACGCGCTTCTTCGTTCTGGTCGAGACGTAGAGGAATCTGCTGAATTCGC GACTCATTTGATGTATTCGGCCTTCCTAACGCCGCCATGCGCTGACTATCTCAAGAGCTGCGTAGCGGAGATTTA TGGGGTTGGACCTGGAGAATGTGATATGTCGTTCCATCGAAGCCTAGAGACGAGGGGTGGAGGAAAGTTGCATAC GGTGCAAACGACTATGGGAATTAAACGACCAGTTGAAATGGCAATGTCTACATATGGCTTCACGAAAGCGCGAAG AAGTCATCAAGAAGCTCTGCTTCACATTTCGGATATCGACAATCGGGAACGGTTCTTAATGAAACTAAAACCGTC TCACCGTTTGGTATTAACGCATTTTTGGGAGACTGGTGTGCTTGCGCCGTTCTTCTTGAATACTGCTTCCTTCAA TCAACCGAATCGGTATTTCATTTTCTTTCTGTCAATTTATATCAATCTAATCATAGTTATAGGCTTCACTTCTCA GCTCAAGGGGAATGGCTGGGTCATCCTAGTGATGCGAACGCGCTCCAAGGATGGGATATCACTGCGGTCAAGAAT ACCGGAGTTAGTCTTGGCCTCGATCCTACTGATATCCTCGGATGTCTTTTCTTCCATGTCAAGTCCGAGTTGATG AAGTTTGCTGATCGCTTACAAAAGCTCTCGGTGACCATTTATTTCACTCAATTTGACGTGCGGGTTCTCTCGAAA GGGATATGCGCTGGTCTCCTTCCCGCCTTTGAACCGGGATGTTTCGACCGTATCGATGCTGGAGATTTGATGGAT ACTCTAGGAGTCCGGGATTGTTTGGCATCTTTGGGCCCGTTGGTCAATCCTAGAAGTCCCGGAGCTTGTATACTC ATGCAGTCAAGGACTTGGTACCATCACGTTCCCGGTGCTATAGCGCGTGGCAATCCTCGCCTTTTCAAAATTCTC ATGGCAAAAGCGAAATTGCTTCCTAGATTGGTGAATACGATGCTCATCTGACTTATACTTTGGTTCTCATATGTT TATAGCACGATAGATTGAGAAAGGCGAATGTATTTGAGACAGGGCAAGAGATAACCTCAACCTCGCTGTTACGGT TGATAGACTATTTGGATGCCTTTGTGGATCACGGTCAACCTTTTAAATCGTTCTTGGAAAGACAAGGAATCGCAG AGATGTGCAAGCGCCTAGGATTCAAGCATAGAGATCAAAATCGCCATCATCCTTCGGTGAGTATATGTAACTTGA CTTTGAGTGGACGATGACTCCTAATCGAAAAAAGCGTATTGGTTTAAGACCTCGAGTTGATGATAATATCGAAAG GAGACGATCTGAAGAAGTACCTGGACTTTGTTTGACGAAAGAAGAATTCTATGATCTATGTAAGTGTCAAGTCAA TTTGTCTTTGTGACGATGATCTTGATTTTTCATAGTTGTCCTGGGAAGTGCTGAATTCCCGACGCGGTTCATTGA ATTCGAACCTCTACCATTGATGTTAGATGATGCAGCCAGTACTGCGAGGCAGACGCTGATATCCACCAACTCAGT CTAA |