Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|095370
Gene name
Locationscaffold_06:1878572..1879253
Strand-
Gene length (bp)681
Transcript length (bp)579
Coding sequence length (bp)579
Protein length (aa) 193

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01753 zf-MYND MYND finger 3.6E-06 3 28

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|095370
MWCSRCQAAWYCTPEHLHQDWARHRKECVPANQSNGSPSSSGTYNGVNMIATPPPAEPQYIAVSAILFSPEEERP
RIITVNCRPSHKPSQGMCPIPIVRELFTDGAPEGIVLTQGLNSEPLRFPLHLWYSPNALKKGAPVNRAIYHITSG
AAPKAWCGAVVVLKFNGSRRQGYSDAGSNDLPALSAYFLAYN*
Coding >Agabi119p4|095370
ATGTGGTGTAGCCGCTGTCAAGCTGCTTGGTATTGCACTCCAGAACATCTTCATCAAGACTGGGCACGACACAGA
AAGGAATGTGTTCCGGCAAATCAATCCAATGGGAGCCCCTCAAGCTCTGGTACCTACAATGGTGTTAACATGATT
GCCACTCCTCCGCCCGCCGAACCCCAGTACATCGCTGTTTCTGCCATTCTCTTTTCTCCAGAAGAAGAGCGACCC
CGCATTATCACGGTCAACTGCCGTCCTTCCCATAAACCCTCCCAGGGCATGTGTCCCATTCCGATTGTACGAGAA
CTCTTCACCGATGGCGCACCCGAGGGCATTGTCCTCACACAAGGTCTCAATAGCGAGCCTCTGCGTTTTCCTCTT
CACTTGTGGTATTCTCCAAATGCACTCAAAAAAGGCGCCCCAGTTAACCGGGCTATATATCATATCACCTCAGGA
GCCGCTCCTAAAGCTTGGTGCGGTGCCGTCGTGGTCCTCAAATTCAACGGTTCGAGGAGACAAGGCTATTCGGAC
GCTGGTTCCAACGACCTCCCTGCCCTGTCAGCTTACTTCTTGGCTTACAATTAA
Transcript >Agabi119p4|095370
ATGTGGTGTAGCCGCTGTCAAGCTGCTTGGTATTGCACTCCAGAACATCTTCATCAAGACTGGGCACGACACAGA
AAGGAATGTGTTCCGGCAAATCAATCCAATGGGAGCCCCTCAAGCTCTGGTACCTACAATGGTGTTAACATGATT
GCCACTCCTCCGCCCGCCGAACCCCAGTACATCGCTGTTTCTGCCATTCTCTTTTCTCCAGAAGAAGAGCGACCC
CGCATTATCACGGTCAACTGCCGTCCTTCCCATAAACCCTCCCAGGGCATGTGTCCCATTCCGATTGTACGAGAA
CTCTTCACCGATGGCGCACCCGAGGGCATTGTCCTCACACAAGGTCTCAATAGCGAGCCTCTGCGTTTTCCTCTT
CACTTGTGGTATTCTCCAAATGCACTCAAAAAAGGCGCCCCAGTTAACCGGGCTATATATCATATCACCTCAGGA
GCCGCTCCTAAAGCTTGGTGCGGTGCCGTCGTGGTCCTCAAATTCAACGGTTCGAGGAGACAAGGCTATTCGGAC
GCTGGTTCCAACGACCTCCCTGCCCTGTCAGCTTACTTCTTGGCTTACAATTAA
Gene >Agabi119p4|095370
ATGTGGTGTAGCCGCTGTCAAGCTGCTTGGTATTGCACTCCAGAACATCTTCATCAAGTGGGCCCTAATATCTCT
TGGTGCTGACCTTGCCGTTGACGTTTCTCCAGGACTGGGCACGACACAGAAAGGAATGTGTTCCGGCAAATCAAT
CCAATGGGAGCCCCTCAAGCTCTGGTACCTACAATGGTGTTAACATGATTGCCACTCCTCCGCCCGCCGAACCCC
AGTACATCGCTGTTTCTGCCATTCTCTTTTCTCCAGAAGAAGGTGAGTGACACGTATCCTTTACCCCCCTGTGTA
CGTCCCTGACTCCTCTTAGAGCGACCCCGCATTATCACGGTCAACTGCCGTCCTTCCCATAAACCCTCCCAGGGC
ATGTGTCCCATTCCGATTGTACGAGAACTCTTCACCGATGGCGCACCCGAGGGCATTGTCCTCACACAAGGTCTC
AATAGCGAGCCTCTGCGTTTTCCTCTTCACTTGTGGTATTCTCCAAATGCACTCAAAAAAGGCGCCCCAGTTAAC
CGGGCTATATATCATATCACCTCAGGAGCCGCTCCTAAAGCTTGGTGCGGTGCCGTCGTGGTCCTCAAATTCAAC
GGTTCGAGGAGACAAGGCTATTCGGACGCTGGTTCCAACGACCTCCCTGCCCTGTCAGCTTACTTCTTGGCTTAC
AATTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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