Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|094490
Gene name
Locationscaffold_06:1645267..1647783
Strand-
Gene length (bp)2516
Transcript length (bp)2022
Coding sequence length (bp)2022
Protein length (aa) 674

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00400 WD40 WD domain, G-beta repeat 9.4E-02 487 525

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|O14576|DC1I1_HUMAN Cytoplasmic dynein 1 intermediate chain 1 OS=Homo sapiens GN=DYNC1I1 PE=1 SV=2 195 645 1.0E-141
sp|Q29RQ3|DC1I1_BOVIN Cytoplasmic dynein 1 intermediate chain 1 OS=Bos taurus GN=DYNC1I1 PE=1 SV=1 199 645 3.0E-141
sp|O88485|DC1I1_MOUSE Cytoplasmic dynein 1 intermediate chain 1 OS=Mus musculus GN=Dync1i1 PE=1 SV=2 1 645 6.0E-141
sp|Q63100|DC1I1_RAT Cytoplasmic dynein 1 intermediate chain 1 OS=Rattus norvegicus GN=Dync1i1 PE=1 SV=1 195 645 5.0E-140
sp|O88487|DC1I2_MOUSE Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus GN=Dync1i2 PE=1 SV=1 150 646 5.0E-140
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|O14576|DC1I1_HUMAN Cytoplasmic dynein 1 intermediate chain 1 OS=Homo sapiens GN=DYNC1I1 PE=1 SV=2 195 645 1.0E-141
sp|Q29RQ3|DC1I1_BOVIN Cytoplasmic dynein 1 intermediate chain 1 OS=Bos taurus GN=DYNC1I1 PE=1 SV=1 199 645 3.0E-141
sp|O88485|DC1I1_MOUSE Cytoplasmic dynein 1 intermediate chain 1 OS=Mus musculus GN=Dync1i1 PE=1 SV=2 1 645 6.0E-141
sp|Q63100|DC1I1_RAT Cytoplasmic dynein 1 intermediate chain 1 OS=Rattus norvegicus GN=Dync1i1 PE=1 SV=1 195 645 5.0E-140
sp|O88487|DC1I2_MOUSE Cytoplasmic dynein 1 intermediate chain 2 OS=Mus musculus GN=Dync1i2 PE=1 SV=1 150 646 5.0E-140
sp|Q0III3|DC1I2_BOVIN Cytoplasmic dynein 1 intermediate chain 2 OS=Bos taurus GN=DYNC1I2 PE=1 SV=1 206 646 2.0E-139
sp|Q5NVM2|DC1I2_PONAB Cytoplasmic dynein 1 intermediate chain 2 OS=Pongo abelii GN=DYNC1I2 PE=2 SV=1 150 646 3.0E-138
sp|Q13409|DC1I2_HUMAN Cytoplasmic dynein 1 intermediate chain 2 OS=Homo sapiens GN=DYNC1I2 PE=1 SV=3 150 646 3.0E-138
sp|Q62871|DC1I2_RAT Cytoplasmic dynein 1 intermediate chain 2 OS=Rattus norvegicus GN=Dync1i2 PE=1 SV=1 150 646 4.0E-137
sp|Q24246|DYIN_DROME Cytoplasmic dynein 1 intermediate chain OS=Drosophila melanogaster GN=sw PE=1 SV=3 207 639 3.0E-128
sp|P54703|DYIN_DICDI Cytoplasmic dynein 1 intermediate chain OS=Dictyostelium discoideum GN=dicA PE=2 SV=2 219 665 3.0E-117
sp|O94518|DIC1_SCHPO Dynein intermediate chain 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=dic1 PE=1 SV=2 236 625 1.0E-53
sp|Q16960|DYI3_HELCR Dynein intermediate chain 3, ciliary OS=Heliocidaris crassispina PE=2 SV=1 211 627 3.0E-28
sp|Q9GZS0|DNAI2_HUMAN Dynein intermediate chain 2, axonemal OS=Homo sapiens GN=DNAI2 PE=1 SV=2 212 593 7.0E-27
sp|Q5VTH9|WDR78_HUMAN WD repeat-containing protein 78 OS=Homo sapiens GN=WDR78 PE=2 SV=1 288 647 1.0E-26
sp|Q66HC9|DNAI2_RAT Dynein intermediate chain 2, axonemal OS=Rattus norvegicus GN=Dnai2 PE=2 SV=1 211 593 3.0E-26
sp|E9PYY5|WDR78_MOUSE WD repeat-containing protein 78 OS=Mus musculus GN=Wdr78 PE=1 SV=1 288 647 3.0E-26
sp|A2AC93|DNAI2_MOUSE Dynein intermediate chain 2, axonemal OS=Mus musculus GN=Dnai2 PE=1 SV=2 211 593 4.0E-26
sp|Q4V8G4|WDR78_RAT WD repeat-containing protein 78 OS=Rattus norvegicus GN=Wdr78 PE=2 SV=1 288 647 1.0E-25
sp|P27766|DYI3_CHLRE Dynein, 70 kDa intermediate chain, flagellar outer arm OS=Chlamydomonas reinhardtii GN=ODA6 PE=1 SV=1 270 620 2.0E-25
sp|Q32KS2|DNAI1_BOVIN Dynein intermediate chain 1, axonemal OS=Bos taurus GN=DNAI1 PE=2 SV=1 213 583 8.0E-24
sp|Q16959|DYI2_HELCR Dynein intermediate chain 2, ciliary OS=Heliocidaris crassispina PE=2 SV=1 238 593 2.0E-23
sp|Q8C0M8|DNAI1_MOUSE Dynein intermediate chain 1, axonemal OS=Mus musculus GN=Dnai1 PE=1 SV=1 213 577 1.0E-22
sp|Q5XIL8|DNAI1_RAT Dynein intermediate chain 1, axonemal OS=Rattus norvegicus GN=Dnai1 PE=1 SV=1 213 577 3.0E-22
sp|Q9UI46|DNAI1_HUMAN Dynein intermediate chain 1, axonemal OS=Homo sapiens GN=DNAI1 PE=1 SV=1 219 606 1.0E-20
sp|Q5U4F6|WDR34_MOUSE WD repeat-containing protein 34 OS=Mus musculus GN=Wdr34 PE=1 SV=2 292 637 4.0E-18
sp|Q39578|DYI2_CHLRE Dynein, 78 kDa intermediate chain, flagellar outer arm OS=Chlamydomonas reinhardtii GN=ODA9 PE=1 SV=3 288 593 4.0E-18
sp|Q96EX3|WDR34_HUMAN WD repeat-containing protein 34 OS=Homo sapiens GN=WDR34 PE=1 SV=2 292 637 4.0E-15
sp|Q8IWG1|WDR63_HUMAN WD repeat-containing protein 63 OS=Homo sapiens GN=WDR63 PE=2 SV=1 218 373 2.0E-08
sp|Q95JP0|WDR63_MACFA WD repeat-containing protein 63 OS=Macaca fascicularis GN=WDR63 PE=2 SV=1 218 373 3.0E-08
sp|P40960|PAC11_YEAST WD repeat-containing protein PAC11 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PAC11 PE=1 SV=2 338 529 7.0E-07
[Show less]

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 13 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|094490
MSDKRRAEIEAKKAKLNELRKARAERQKAEAEKRQEIVGPSPRKEDVLELVDILTRSTNKRGGPDSVGDFTPSSS
IPGTPALGHSALLSGSAGLGVPPPRTTSRQSDLTSDRGISAVQLTASSGTDHVVEREVYPRSMMDLVDVEQELFE
LPQKERVIYNKEVQTNVEETGTNLQDMEDEIRQRILREKEVEAERVAREKELEEESVKLDQEIEQEIRELSEEER
ASIFSAPDFLDFVEQSSKILQRALNDNYDYIRDYTIGAESGGDDSEGKRVKKVCEFSDERYVKNRSITDIDWSPK
YPELSVASYNKNSAALNEPDGIVAVWNIHLLERPEFIFHSQSDVLSVTFSPFHSNLIFGGTYSGQILLWDTRAKH
LPVLKTPLSAAGHTHPVYAMHMVGTQNAHNLITSSTDGTVCSWLVDMLAQPQETLELVHSGHNKTGEVAITTLDF
PDNETTTFWVGTEEGNVYQANRYDRAGAKAGLNQYDVYKGHAGPVMGLHFHPLVGPVDFSDLFLTCSVDWTVKLW
RAKSLAKPSTSNHLVPPIYSFEEADDYVYDVKWHPSHPAIWASVDGSAKFDLWNLNMDTEVPVVSTTVGTGLKAI
NKIQWDRKEGRRAALGGSDGKLYIYDIGDMAIPRESEWTDMQKTVAGMVGGGGSGHVNGVGERESDLLRMSTR*
Coding >Agabi119p4|094490
ATGTCTGATAAACGACGAGCAGAAATCGAGGCCAAAAAGGCAAAGCTCAATGAGCTCCGCAAGGCCCGCGCAGAA
CGCCAAAAAGCTGAGGCCGAGAAACGCCAGGAAATTGTCGGCCCCTCGCCGCGCAAAGAAGATGTATTGGAACTG
GTCGATATACTCACACGGAGCACAAATAAACGAGGAGGCCCCGACTCGGTTGGCGATTTCACCCCTTCCTCATCT
ATACCAGGCACCCCGGCTCTTGGCCATTCTGCACTATTGTCTGGAAGTGCAGGCCTTGGCGTACCCCCTCCACGA
ACGACTAGCAGACAGAGCGATCTCACGTCTGATCGAGGCATAAGTGCTGTCCAATTGACGGCGAGTTCGGGCACC
GACCATGTTGTCGAAAGAGAAGTATATCCCCGTTCTATGATGGATCTCGTCGACGTCGAACAGGAGTTGTTCGAG
CTGCCGCAGAAGGAGCGCGTGATATACAACAAGGAAGTGCAAACAAATGTTGAAGAAACAGGCACCAACTTACAG
GATATGGAAGATGAAATAAGACAGCGGATACTACGAGAAAAAGAAGTAGAGGCAGAGCGCGTGGCACGAGAGAAG
GAACTCGAGGAGGAGAGTGTGAAACTGGACCAAGAAATCGAGCAAGAGATCAGAGAGCTTTCCGAGGAAGAACGT
GCCAGCATATTCTCCGCGCCGGATTTTTTGGACTTTGTGGAACAGTCGTCGAAAATCCTCCAAAGAGCGCTGAAC
GATAATTATGACTATATACGCGATTATACCATCGGCGCTGAATCGGGAGGGGACGATTCTGAAGGAAAGCGCGTC
AAGAAAGTATGCGAATTTTCCGACGAGCGATATGTCAAAAATCGATCAATAACTGACATTGACTGGTCACCCAAA
TATCCCGAGCTGAGCGTCGCTTCGTATAACAAGAACTCTGCAGCGCTCAATGAGCCGGACGGTATTGTTGCCGTC
TGGAATATTCACCTCCTCGAACGACCGGAATTCATCTTTCACTCACAATCAGACGTTCTTTCAGTCACATTCTCA
CCATTTCATTCAAACCTAATCTTCGGTGGCACTTATTCTGGCCAGATTCTGCTGTGGGATACGCGCGCAAAACAT
TTACCAGTCCTAAAAACACCACTATCAGCTGCCGGCCATACACATCCTGTATATGCTATGCACATGGTGGGCACA
CAGAATGCCCATAACCTTATTACCAGCAGTACAGATGGGACGGTTTGTAGTTGGCTAGTCGATATGCTTGCGCAG
CCTCAGGAAACCCTAGAACTTGTGCATAGTGGCCACAACAAAACCGGTGAAGTCGCAATCACAACACTCGACTTT
CCTGATAATGAGACTACAACTTTCTGGGTCGGAACGGAGGAAGGAAACGTCTATCAAGCGAATCGATACGACCGT
GCTGGAGCGAAAGCTGGTCTTAACCAGTATGACGTGTACAAAGGCCACGCGGGGCCTGTTATGGGTCTCCATTTC
CATCCCCTAGTGGGGCCCGTAGATTTCTCTGATCTGTTCTTGACGTGTTCGGTGGATTGGACAGTGAAATTATGG
CGAGCGAAGAGTTTGGCGAAACCCTCTACATCAAATCACTTGGTGCCCCCTATCTATTCATTCGAAGAAGCAGAC
GATTATGTCTATGATGTCAAGTGGCATCCAAGCCATCCAGCTATTTGGGCTAGTGTAGATGGATCCGCCAAATTT
GACTTGTGGAATCTGAACATGGATACTGAGGTCCCAGTAGTATCCACGACTGTTGGCACCGGCCTCAAAGCAATT
AACAAGATTCAGTGGGATCGCAAAGAAGGACGACGGGCTGCACTTGGCGGGAGCGATGGCAAATTATACATTTAC
GATATTGGAGATATGGCCATCCCTAGAGAGTCGGAGTGGACGGATATGCAAAAGACAGTCGCGGGTATGGTCGGG
GGCGGTGGTTCGGGCCATGTGAATGGAGTTGGGGAGAGAGAAAGTGATTTACTCAGAATGAGTACACGATGA
Transcript >Agabi119p4|094490
ATGTCTGATAAACGACGAGCAGAAATCGAGGCCAAAAAGGCAAAGCTCAATGAGCTCCGCAAGGCCCGCGCAGAA
CGCCAAAAAGCTGAGGCCGAGAAACGCCAGGAAATTGTCGGCCCCTCGCCGCGCAAAGAAGATGTATTGGAACTG
GTCGATATACTCACACGGAGCACAAATAAACGAGGAGGCCCCGACTCGGTTGGCGATTTCACCCCTTCCTCATCT
ATACCAGGCACCCCGGCTCTTGGCCATTCTGCACTATTGTCTGGAAGTGCAGGCCTTGGCGTACCCCCTCCACGA
ACGACTAGCAGACAGAGCGATCTCACGTCTGATCGAGGCATAAGTGCTGTCCAATTGACGGCGAGTTCGGGCACC
GACCATGTTGTCGAAAGAGAAGTATATCCCCGTTCTATGATGGATCTCGTCGACGTCGAACAGGAGTTGTTCGAG
CTGCCGCAGAAGGAGCGCGTGATATACAACAAGGAAGTGCAAACAAATGTTGAAGAAACAGGCACCAACTTACAG
GATATGGAAGATGAAATAAGACAGCGGATACTACGAGAAAAAGAAGTAGAGGCAGAGCGCGTGGCACGAGAGAAG
GAACTCGAGGAGGAGAGTGTGAAACTGGACCAAGAAATCGAGCAAGAGATCAGAGAGCTTTCCGAGGAAGAACGT
GCCAGCATATTCTCCGCGCCGGATTTTTTGGACTTTGTGGAACAGTCGTCGAAAATCCTCCAAAGAGCGCTGAAC
GATAATTATGACTATATACGCGATTATACCATCGGCGCTGAATCGGGAGGGGACGATTCTGAAGGAAAGCGCGTC
AAGAAAGTATGCGAATTTTCCGACGAGCGATATGTCAAAAATCGATCAATAACTGACATTGACTGGTCACCCAAA
TATCCCGAGCTGAGCGTCGCTTCGTATAACAAGAACTCTGCAGCGCTCAATGAGCCGGACGGTATTGTTGCCGTC
TGGAATATTCACCTCCTCGAACGACCGGAATTCATCTTTCACTCACAATCAGACGTTCTTTCAGTCACATTCTCA
CCATTTCATTCAAACCTAATCTTCGGTGGCACTTATTCTGGCCAGATTCTGCTGTGGGATACGCGCGCAAAACAT
TTACCAGTCCTAAAAACACCACTATCAGCTGCCGGCCATACACATCCTGTATATGCTATGCACATGGTGGGCACA
CAGAATGCCCATAACCTTATTACCAGCAGTACAGATGGGACGGTTTGTAGTTGGCTAGTCGATATGCTTGCGCAG
CCTCAGGAAACCCTAGAACTTGTGCATAGTGGCCACAACAAAACCGGTGAAGTCGCAATCACAACACTCGACTTT
CCTGATAATGAGACTACAACTTTCTGGGTCGGAACGGAGGAAGGAAACGTCTATCAAGCGAATCGATACGACCGT
GCTGGAGCGAAAGCTGGTCTTAACCAGTATGACGTGTACAAAGGCCACGCGGGGCCTGTTATGGGTCTCCATTTC
CATCCCCTAGTGGGGCCCGTAGATTTCTCTGATCTGTTCTTGACGTGTTCGGTGGATTGGACAGTGAAATTATGG
CGAGCGAAGAGTTTGGCGAAACCCTCTACATCAAATCACTTGGTGCCCCCTATCTATTCATTCGAAGAAGCAGAC
GATTATGTCTATGATGTCAAGTGGCATCCAAGCCATCCAGCTATTTGGGCTAGTGTAGATGGATCCGCCAAATTT
GACTTGTGGAATCTGAACATGGATACTGAGGTCCCAGTAGTATCCACGACTGTTGGCACCGGCCTCAAAGCAATT
AACAAGATTCAGTGGGATCGCAAAGAAGGACGACGGGCTGCACTTGGCGGGAGCGATGGCAAATTATACATTTAC
GATATTGGAGATATGGCCATCCCTAGAGAGTCGGAGTGGACGGATATGCAAAAGACAGTCGCGGGTATGGTCGGG
GGCGGTGGTTCGGGCCATGTGAATGGAGTTGGGGAGAGAGAAAGTGATTTACTCAGAATGAGTACACGATGA
Gene >Agabi119p4|094490
ATGTCTGATAAACGACGAGCAGAAATCGAGGCCAAAAAGGCAAAGCTCAATGAGCTCCGCAAGGCCCGCGCAGAA
CGCCAAAAAGCTGAGGCCGAGAAACGCCAGGAAGTATGGAAAACGCTATCCTTCATCTTAACATTCTTAATTCAG
TCTCTCTTTCTCTGTCTCTCGTAGATTGTCGGCCCCTCGCCGCGCAAAGAAGATGTATTGGAACTGGTCGATATA
CTCACACGGAGCACAAATAAACGAGGAGGCCCCGACTCGGTTGGCGATTTCACCCCTTCCTCATCTATACCAGGC
ACCCCGGCTCTTGGCCATTCTGCACTATTGTCTGGAAGTGCAGGCCTTGGCGTACCCCCTCCACGAACGACTAGC
AGACAGAGCGATCTCACGTCTGATCGAGGCATAAGTGCTGTCCAATTGACGGCGAGTTCGGGCACCGACCATGTT
GTCGAAAGGTTGAATACTTTCGTGCAACGTTGCATATGCCTGACTATTATGAATTTAGAGAAGTATATCCCCGTT
CTATGATGGATCTCGTCGACGTCGAACAGGAGTTGTTCGAGCTGCCGCAGAAGGTGGGTTTAAGCAACAGAATAA
CGACGTATACAGTACTCTATAATGGACTTGCAGGAGCGCGTGATATACAACAAGGAAGTGCAAACAAATGTTGAA
GAAACAGGCACCAACTTACAGGATATGGAAGATGAAATAAGACAGCGGATACTACGAGAAAAAGAAGTAGAGGCA
GAGCGCGTGGCACGAGAGAAGGAACTCGAGGAGGAGAGTGTGAAACTGGACCAAGAAATCGAGCAAGAGATCAGA
GGCAAGTACTCTATCGTTATTCCGCCATGTCCTGTCATATTAACAAAATGTTTAGAGCTTTCCGAGGAAGAACGT
GCCAGCATATTCTCCGCGCCGGATTTTTTGGACTTTGTGGAACAGTCGTCGAAAATCCTCCAAAGAGCGCTGAAC
GATAATTATGACTATATACGCGATTATACCATCGGCGCTGAATCGGGAGGGTGAGTGCATGTTTGATCTGCCTTG
GCGCCGTCAACGATAACGTTTACAGGGACGATTCTGAAGGAAAGCGCGTCAAGAAAGTATGCGAATTTTCCGACG
AGCGATATGTCAAAAATCGATCAATAACTGACATTGACTGGTCACCCAAAGTAAAGTTCACTTCTTCTTACCTCT
ATGGATTCACTTCATCTCACACCTGCAATCCAGTATCCCGAGCTGAGCGTCGCTTCGTATAACAAGAACTCTGCA
GCGCTCAATGAGCCGGACGGTATTGTTGCCGTCTGGAATATTCACCTCCTCGAACGACCGGAATTCATCTTTCAC
TCACAAGTGCGTGTGCTTCAGCATGTTTCGCAGTGACAGCATTCATGGCTACCCAGTCAGACGTTCTTTCAGTCA
CATTCTCACCATTTCATTCAAACCTAATCTTCGGTGGCACTTATTCTGGCCAGATTCTGCTGTGGGATACGCGCG
CAAAACATTTACCAGTCCTAAAAACACCACTATCAGCTGCCGGCCATACACATCCTGTATATGCTATGCACATGG
TGGGCACACAGAATGCCCATAACCTTATTACCAGCAGTACAGATGGGACGGTTTGTAGTTGGCTAGTCGATATGC
TTGCGCAGCCTCAGGTATATCCCTATAAATTGCAGCTTTACAATTACGATCTCACGATGTCTTCAGGAAACCCTA
GAACTTGTGCATAGTGGCCACAACAAAACCGGTGAAGTCGCAATCACAACACTCGACTTTCCTGATAATGAGACT
ACAACTTTCTGGGTCGGAACGGAGGAAGGAAACGTCTATCAAGCGAATCGATACGACCGTGCTGGAGCGAAAGCT
GGTCTTAACCAGTATGACGTGTACAAAGGCCACGCGGGGCCTGTTATGGGTCTCCATTTCCATCCCCTAGTGGGG
CCCGTAGATTTCTCTGATCTGTTCTTGACGTGTTCGGTGGATTGGACAGTGAAATTATGGCGAGCGAAGAGTTTG
GCGAAACCCTCTACATCAAATCACTTGGTGCCCCCTATCTATTCATTCGAAGAAGCAGACGATTATGTCTATGAT
GTCAAGTGGCATCCAAGCCATCCAGCTATTTGGGCTAGTGTAGATGGATCCGCCAAATTTGACTTGTGGAATCTG
AACATGGATACTGAGGTATGTTACTCATTCTCGAGCCCTTACACCTATCCATTGTGTTGATATGTTCGTTATAGG
TCCCAGTAGTATCCACGACTGTTGGCACCGGCCTCAAAGCAATTAACAAGATTCAGTGGGATCGCAAAGAAGGAC
GACGGGCTGCACTTGGCGGGAGCGATGGCAAATTATACATTTACGATATTGGAGATATGGCCATCCCTAGAGAGT
CGGAGTGGACGGATATGCAAAAGACAGTCGCGGGTATGGTCGGGGGCGGTGGTTCGGGCCATGTGAATGGAGTTG
GGGAGAGAGAAAGTGATTTACTCAGAATGAGTACACGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail