© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|092820 |
| Gene name | |
| Location | scaffold_06:1188749..1190832 |
| Strand | + |
| Gene length (bp) | 2083 |
| Transcript length (bp) | 1371 |
| Coding sequence length (bp) | 1371 |
| Protein length (aa) | 457 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF10355 | Ytp1 | Protein of unknown function (Ytp1) | 4.8E-57 | 148 | 408 |
| PF10348 | DUF2427 | Domain of unknown function (DUF2427) | 1.3E-26 | 27 | 123 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P53584|YTP1_YEAST | Protein YTP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YTP1 PE=1 SV=1 | 135 | 450 | 2.0E-63 |
| sp|O59714|YBH6_SCHPO | Uncharacterized membrane protein C3B8.06 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC3B8.06 PE=1 SV=1 | 135 | 414 | 2.0E-09 |
| sp|P25639|YCV1_YEAST | Uncharacterized membrane protein YCR061W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YCR061W PE=1 SV=2 | 207 | 381 | 1.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 3 | 20 | 17 |
| 2 | 40 | 62 | 22 |
| 3 | 69 | 88 | 19 |
| 4 | 98 | 120 | 22 |
| 5 | 133 | 155 | 22 |
| 6 | 175 | 194 | 19 |
| 7 | 207 | 224 | 17 |
| 8 | 239 | 256 | 17 |
| 9 | 263 | 285 | 22 |
| 10 | 384 | 406 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|092820 MRLGPAAVVLSIAIVLVAAHEHHDELSEDEANAPVDAILWIHMFLQAAVWGIIFPVGMVLGLTRSRWHVPLQSTG FALSIAGFFLGHAHKGRQFLPSIHGTFASILFIPIIAQLFIGIYLKLHIHERSIRPYVVFAHGILGKLYPILGWV QMLFGAVTFRGYCRGGHLGQCLAHYIMGSGFIAYAVIMSIILLVGEAWVRRSGRSPEFWDSLIITLWGIVNTFTE HHGGEWSVKDMQHTILGVLWWCGGILGIWLSRNNQRNVVPAIIIILTGWAMSDHAQALAISSKVHSMFGRTLMLA GLTRIIEICYFSPTSVPNDVDDDSNSDRTIGGSLHTSPRDNGTTSAGFRAFRHLPPFLLVSSGLLFMSATDEELQ FVHDNGMDHVTYILIIFSLAFFMYTLIVYLIHLSTASGRNAPTKTVENADMSRGMWYDRVPLAEERTPVRDIPLH TIGEDD* |
| Coding | >Agabi119p4|092820 ATGCGTCTAGGCCCAGCGGCAGTGGTGCTGAGCATTGCAATCGTGTTGGTTGCAGCTCACGAGCATCATGACGAA CTCTCAGAGGATGAGGCAAATGCACCCGTCGATGCCATCTTGTGGATACATATGTTCCTGCAGGCTGCTGTCTGG GGAATCATATTTCCCGTCGGAATGGTGCTTGGCCTGACGCGTAGTCGCTGGCACGTTCCATTACAGTCAACCGGA TTTGCTCTTTCGATTGCTGGTTTCTTTTTGGGTCATGCACACAAGGGCCGGCAATTCCTTCCCTCAATTCACGGC ACATTTGCGTCCATCCTATTCATTCCCATCATTGCCCAACTGTTTATTGGCATCTATCTCAAACTTCATATTCAC GAACGAAGTATCCGACCATATGTTGTCTTTGCCCACGGAATTCTCGGAAAGTTGTATCCCATACTTGGATGGGTA CAGATGCTTTTTGGCGCCGTTACTTTCCGCGGCTATTGTAGGGGTGGACATCTTGGTCAATGCTTAGCGCACTAC ATCATGGGCAGTGGCTTCATCGCATATGCTGTCATCATGTCCATTATCTTGCTTGTTGGTGAGGCATGGGTCCGC CGGTCTGGAAGAAGCCCAGAATTCTGGGATTCATTGATTATCACACTCTGGGGCATCGTGAATACCTTTACCGAA CATCATGGAGGTGAATGGTCGGTCAAAGATATGCAACACACAATTTTAGGCGTTTTGTGGTGGTGTGGTGGTATC CTTGGTATCTGGTTGTCGCGAAATAACCAGCGAAATGTGGTTCCGGCTATTATTATCATTTTGACCGGATGGGCC ATGTCAGATCATGCCCAGGCCCTCGCTATCTCATCCAAAGTGCACTCGATGTTTGGGCGTACATTGATGCTTGCG GGTTTGACACGCATTATTGAAATTTGTTATTTTTCTCCAACGTCGGTGCCTAATGATGTGGATGATGACAGCAAC AGTGACCGTACTATTGGCGGAAGCCTGCATACGTCGCCAAGAGACAATGGAACCACTAGCGCTGGTTTCCGTGCG TTTAGACATCTCCCACCTTTCCTTTTGGTCTCCTCAGGGTTGCTCTTCATGTCAGCGACGGACGAGGAACTTCAA TTTGTCCATGACAATGGAATGGATCATGTCACGTATATTTTAATCATCTTCAGCCTGGCTTTCTTTATGTACACG CTCATCGTCTATCTTATCCATCTATCTACCGCTTCGGGACGTAATGCACCCACTAAAACCGTTGAAAACGCAGAC ATGTCCCGAGGAATGTGGTATGATCGCGTGCCTCTAGCCGAGGAACGGACACCTGTTAGAGATATACCGCTGCAC ACTATCGGAGAGGATGACTAG |
| Transcript | >Agabi119p4|092820 ATGCGTCTAGGCCCAGCGGCAGTGGTGCTGAGCATTGCAATCGTGTTGGTTGCAGCTCACGAGCATCATGACGAA CTCTCAGAGGATGAGGCAAATGCACCCGTCGATGCCATCTTGTGGATACATATGTTCCTGCAGGCTGCTGTCTGG GGAATCATATTTCCCGTCGGAATGGTGCTTGGCCTGACGCGTAGTCGCTGGCACGTTCCATTACAGTCAACCGGA TTTGCTCTTTCGATTGCTGGTTTCTTTTTGGGTCATGCACACAAGGGCCGGCAATTCCTTCCCTCAATTCACGGC ACATTTGCGTCCATCCTATTCATTCCCATCATTGCCCAACTGTTTATTGGCATCTATCTCAAACTTCATATTCAC GAACGAAGTATCCGACCATATGTTGTCTTTGCCCACGGAATTCTCGGAAAGTTGTATCCCATACTTGGATGGGTA CAGATGCTTTTTGGCGCCGTTACTTTCCGCGGCTATTGTAGGGGTGGACATCTTGGTCAATGCTTAGCGCACTAC ATCATGGGCAGTGGCTTCATCGCATATGCTGTCATCATGTCCATTATCTTGCTTGTTGGTGAGGCATGGGTCCGC CGGTCTGGAAGAAGCCCAGAATTCTGGGATTCATTGATTATCACACTCTGGGGCATCGTGAATACCTTTACCGAA CATCATGGAGGTGAATGGTCGGTCAAAGATATGCAACACACAATTTTAGGCGTTTTGTGGTGGTGTGGTGGTATC CTTGGTATCTGGTTGTCGCGAAATAACCAGCGAAATGTGGTTCCGGCTATTATTATCATTTTGACCGGATGGGCC ATGTCAGATCATGCCCAGGCCCTCGCTATCTCATCCAAAGTGCACTCGATGTTTGGGCGTACATTGATGCTTGCG GGTTTGACACGCATTATTGAAATTTGTTATTTTTCTCCAACGTCGGTGCCTAATGATGTGGATGATGACAGCAAC AGTGACCGTACTATTGGCGGAAGCCTGCATACGTCGCCAAGAGACAATGGAACCACTAGCGCTGGTTTCCGTGCG TTTAGACATCTCCCACCTTTCCTTTTGGTCTCCTCAGGGTTGCTCTTCATGTCAGCGACGGACGAGGAACTTCAA TTTGTCCATGACAATGGAATGGATCATGTCACGTATATTTTAATCATCTTCAGCCTGGCTTTCTTTATGTACACG CTCATCGTCTATCTTATCCATCTATCTACCGCTTCGGGACGTAATGCACCCACTAAAACCGTTGAAAACGCAGAC ATGTCCCGAGGAATGTGGTATGATCGCGTGCCTCTAGCCGAGGAACGGACACCTGTTAGAGATATACCGCTGCAC ACTATCGGAGAGGATGACTAG |
| Gene | >Agabi119p4|092820 ATGCGTCTAGGCCCAGCGGCAGTGGTGCTGAGCATTGCAATCGTGTTGGTTGCAGCTCACGAGCATCATGACGAA CTCTCAGAGGATGAGGCAAATGCACCCGTCGATGCCATCTTGTGGATACATATGTTCCTGCAGGCTGCTGTCTGG GGAATCATATTTCCCGTCGGAATGGTGCTTGGCCTGACGCGTAGTCGCTGGCACGTTCCATTACAGGTGAACTCG TTGTTTTCGTCCCTTTTTCGGTATTGATAGTCGATTAGTCAACCGGATTTGCTCTTTCGATTGCTGGTTTCTTTT TGGGTCATGCACACAAGGGCCGGCAATTCCTTCCCTCAATTCACGGCACATTTGCGTCCATCCTATTCATTCCCA TCATTGCCCAACTGTTTATTGGCATCTATCTCAAACTTCATATTCACGAACGAAGTATCCGACCATATGTTGTCT TTGCCCACGGAATTCTCGGAAAGTTGTATCCCATACTTGGATGGGTACAGATGCTTTTTGGCGCCGTTACTTTCC GCGGCTATTGTAGGGGTGGACATCTTGGTGAGATAATGATTTTCTTGCAACACTATTGGCCGAGCTTACGCTCGT ATTCAGGTCAATGCTTAGCGCACTACATCATGGGCAGTGGCTTCATCGCATATGCTGTCATCATGTCCATTATCT TGCTTGTTGGTGAGGCATGGGTCCGCCGGTCTGGAAGAAGCCCAGAATTCTGGGATTCATTGTGGGTATTTCTCT CCTGATTTCAACTGTTGCTAATTCGCCTGTCCAGGATTATCACACTCTGGGTATGTTCATGATCTCTCTCACCTG TCACATACTCGAATTAAAACCTTTGCATTTCCATAGGGCATCGGTATGAAAAACTTTTAGTCATCCCGTTGGCGA CCACTAATCATCTATTGTAAAAGTGAATACCTTTACCGAACATCATGGAGGTGAATGGTCGGTCAAAGATATGCA ACACACGTAAGCTCTGCTTCACCTGCCCTTAACGCTAAATTGATTTGGTTGCGAAGAATTTTAGGCGTTTTGTGT AAATTTTGGATATTCATTCAATGGCACATAACAAACCGACTGATGGATGTTTCGACTTAGGGTGGTGTGGTGGTA TCCTTGGTATCTGGTTGTCGCGAAATAACCAGGTAAGCCTGAAACGAGTCAACACTTTGTGTTTTGTTTCTGACA TCCAGTCTAGCGAAATGTGGTTCCGGCTATTATGTGAGACTACAGTTATCTTGATCAGGCATAGTTCCTGAGTGT AATACTTCATTTTAGTATCATTTTGACCGGATGGGCCATGTCAGATCATGCCCAGGCCCTCGCTATCTCATCCAA AGTTCGTTTCCGTTCTCCTATTGTTTCCTTGATTCTAAAATTTTCATTGTCATCAGGTGCACTCGATGTTTGGGC GTACATTGATGCTTGCGGGTTTGACACGCATTATTGAAATTTGTTATTTTTCTCCAACGTCGGTGCCTAATGATG TGGATGATGACAGCAACAGTGACCGTACTATTGGCGGAAGCCTGCATACGTCGCCAAGAGACAATGGAACCACTA GCGCTGGTTTCCGTGCGTTTAGACATCTCCCACCTTTCGTGAGTACATCCGTCTCGTACTTATAGGACCTGACTC TAATAATTTTTCGACAGCTTTTGGTCTCCTCAGGGTAAATAGCTCGTGCGCTTATATCACAGGTTAGAAACTAGA TCGTAAACGGAATCTTATAGGTTGCTCTTCATGTCAGCGACGGACGAGGAACTTCAATTTGTCCATGACAATGGA ATGGATCATGTCACGTATATTTTAATCATCTTCAGGTATGTTTACATCCATTTTCACAAGCCATAGTCCCGCATA TAATTCGTGTTGCAGCCTGGCTTTCTTTATGTACACGCTCATCGTCTATCTTATCCATCTATCTACCGCTTCGGG ACGTAATGCACCCACTAAAACCGTTGAAAACGCAGACATGTCCCGAGGAATGTGGTATGATCGCGTGCCTCTAGC CGAGGAACGGACACCTGTTAGAGATATACCGCTGCACACTATCGGAGAGGATGACTAG |