Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|091850
Gene name
Locationscaffold_06:946361..948243
Strand+
Gene length (bp)1882
Transcript length (bp)1551
Coding sequence length (bp)1551
Protein length (aa) 517

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF19270 FBO_C F-box only protein C-terminal region 1.2E-16 298 363
PF12937 F-box-like F-box-like 1.0E-06 236 280
PF00646 F-box F-box domain 1.1E-06 235 276

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O74531|POF7_SCHPO F-box protein pof7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pof7 PE=1 SV=2 97 359 1.0E-16
sp|Q9UK97|FBX9_HUMAN F-box only protein 9 OS=Homo sapiens GN=FBXO9 PE=1 SV=1 225 516 6.0E-15
sp|Q6P3K3|FBX9_DANRE F-box only protein 9 OS=Danio rerio GN=fbxo9 PE=2 SV=1 227 396 6.0E-15
sp|Q3ZBT2|FBX9_BOVIN F-box only protein 9 OS=Bos taurus GN=FBXO9 PE=2 SV=2 225 396 2.0E-14
sp|Q8BK06|FBX9_MOUSE F-box only protein 9 OS=Mus musculus GN=Fbxo9 PE=1 SV=1 225 516 2.0E-14
[Show all]
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Swissprot ID Swissprot Description Start End E-value
sp|O74531|POF7_SCHPO F-box protein pof7 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pof7 PE=1 SV=2 97 359 1.0E-16
sp|Q9UK97|FBX9_HUMAN F-box only protein 9 OS=Homo sapiens GN=FBXO9 PE=1 SV=1 225 516 6.0E-15
sp|Q6P3K3|FBX9_DANRE F-box only protein 9 OS=Danio rerio GN=fbxo9 PE=2 SV=1 227 396 6.0E-15
sp|Q3ZBT2|FBX9_BOVIN F-box only protein 9 OS=Bos taurus GN=FBXO9 PE=2 SV=2 225 396 2.0E-14
sp|Q8BK06|FBX9_MOUSE F-box only protein 9 OS=Mus musculus GN=Fbxo9 PE=1 SV=1 225 516 2.0E-14
sp|Q5U2X1|FBX9_RAT F-box only protein 9 OS=Rattus norvegicus GN=Fbxo9 PE=1 SV=1 225 516 2.0E-14
sp|Q9XI00|SKI32_ARATH F-box protein 7 OS=Arabidopsis thaliana GN=SKIP32 PE=1 SV=1 233 359 3.0E-14
sp|F6Y9J3|FBX9_XENTR F-box only protein 9 OS=Xenopus tropicalis GN=fbxo9 PE=3 SV=1 211 396 2.0E-13
sp|Q12347|HRT3_YEAST F-box protein HRT3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HRT3 PE=1 SV=1 91 366 7.0E-13
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup6056
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|091850
Agaricus bisporus var bisporus H97 AgabiH97|091850
Agaricus bisporus var burnettii H119p4 Agabi119p4|091850 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|091850
MANGKAKATELSPEEESPELARFREEWKAELERRKQATRTSLQTPSSSSTTRPTEVPHIFPARSTKETHGSSTPF
DGQHPAITPDGEILDQKRPKALSSALGVYRQAVLHEQAGDLDSALMCYRQAFRTDPHVDRAYRREEMLKNMVYEQ
QVVKKDPSTPSTTTTASTNSVMTRSPGGISEMTDEITETMRLLSIKSQTQAIVTGTFGALVASFLDREPGRLAFK
PEDETQPVIFNDLPEEILVEIIHLLDPTSIERFAQVSKKARIVTLESSIWRSLVVSTYKEPQIPDLDVLAEIVSR
YMFDYRRIYIEQPRVRLDGVYIAICHYVRPGLSENHWVNMNHLITYHRYLRFYPNGQVLSLLANEEHPPQTIINI
LKPSLRMKGLCIGIWELTGTTVTLSNLSDASGRFIIPEELGTETESGTSTSKGIEIPPPPSTTTHPTSQHRPSHH
FHSQTELQPSRYVFSMSLSLRSRPLGRWNRLDIQSYDTLNIETGDVTPVALKHERSFWFSRVRSYT*
Coding >Agabi119p4|091850
ATGGCCAACGGCAAGGCCAAAGCCACTGAGCTCTCGCCAGAGGAAGAGTCTCCAGAACTCGCAAGGTTCAGAGAG
GAATGGAAGGCTGAATTAGAGAGACGCAAACAAGCTACTCGGACTTCGTTGCAAACGCCCTCGTCATCCTCTACA
ACTCGACCGACTGAAGTCCCTCATATATTTCCTGCGCGCAGCACCAAGGAAACCCATGGTTCTTCTACTCCATTC
GATGGTCAACATCCGGCCATCACTCCCGACGGAGAGATACTTGACCAGAAACGTCCGAAGGCTTTATCGAGTGCA
CTCGGTGTCTATCGACAGGCAGTTCTTCACGAACAGGCTGGAGATCTAGATAGTGCTTTAATGTGCTATAGACAA
GCTTTTCGTACGGATCCTCACGTCGATCGTGCATACCGTCGCGAGGAAATGTTGAAGAACATGGTATACGAACAA
CAAGTTGTAAAGAAGGATCCCTCCACTCCATCTACAACCACCACCGCCTCTACTAACTCGGTTATGACTCGATCA
CCGGGTGGCATATCCGAAATGACAGATGAGATTACAGAAACCATGAGGTTGTTGTCTATTAAATCTCAAACGCAA
GCCATCGTAACCGGTACATTCGGTGCGCTCGTCGCGTCATTCTTGGATCGAGAACCAGGCAGACTCGCTTTCAAA
CCTGAAGATGAAACTCAACCAGTCATTTTTAACGATCTTCCTGAGGAAATTCTCGTCGAGATAATTCATCTCTTG
GATCCTACGTCTATTGAAAGATTTGCGCAAGTCTCCAAGAAGGCCAGAATCGTAACACTGGAATCTTCTATCTGG
CGGAGTTTGGTTGTTTCGACGTATAAGGAACCTCAGATACCTGACTTGGACGTGTTGGCTGAAATTGTTTCGCGG
TATATGTTTGACTATCGACGGATATATATTGAACAACCTCGCGTGAGGCTCGATGGTGTATATATTGCCATATGC
CACTACGTACGACCAGGTTTAAGTGAAAACCACTGGGTAAACATGAACCATTTGATTACCTATCACCGTTACCTT
CGCTTTTACCCTAATGGCCAGGTCCTTTCTTTGCTCGCAAACGAGGAACATCCACCACAAACGATAATCAACATT
CTCAAACCGTCCCTCAGAATGAAGGGTTTATGCATCGGTATCTGGGAACTCACTGGAACGACTGTAACACTATCA
AACCTCTCCGACGCCAGTGGTCGATTTATAATTCCAGAAGAATTAGGAACCGAAACTGAATCCGGAACTTCGACT
AGTAAAGGAATTGAAATACCACCACCACCATCTACTACTACTCATCCAACATCACAACATCGTCCCAGTCATCAT
TTTCACTCACAAACTGAACTACAGCCCTCTCGATATGTTTTCTCCATGTCACTTTCTCTACGGTCTCGACCTTTA
GGAAGATGGAATAGGCTGGATATACAATCGTATGATACTCTCAATATTGAAACTGGTGATGTTACCCCTGTGGCA
CTTAAACATGAGAGATCGTTTTGGTTCTCGAGGGTTAGGTCTTATACATGA
Transcript >Agabi119p4|091850
ATGGCCAACGGCAAGGCCAAAGCCACTGAGCTCTCGCCAGAGGAAGAGTCTCCAGAACTCGCAAGGTTCAGAGAG
GAATGGAAGGCTGAATTAGAGAGACGCAAACAAGCTACTCGGACTTCGTTGCAAACGCCCTCGTCATCCTCTACA
ACTCGACCGACTGAAGTCCCTCATATATTTCCTGCGCGCAGCACCAAGGAAACCCATGGTTCTTCTACTCCATTC
GATGGTCAACATCCGGCCATCACTCCCGACGGAGAGATACTTGACCAGAAACGTCCGAAGGCTTTATCGAGTGCA
CTCGGTGTCTATCGACAGGCAGTTCTTCACGAACAGGCTGGAGATCTAGATAGTGCTTTAATGTGCTATAGACAA
GCTTTTCGTACGGATCCTCACGTCGATCGTGCATACCGTCGCGAGGAAATGTTGAAGAACATGGTATACGAACAA
CAAGTTGTAAAGAAGGATCCCTCCACTCCATCTACAACCACCACCGCCTCTACTAACTCGGTTATGACTCGATCA
CCGGGTGGCATATCCGAAATGACAGATGAGATTACAGAAACCATGAGGTTGTTGTCTATTAAATCTCAAACGCAA
GCCATCGTAACCGGTACATTCGGTGCGCTCGTCGCGTCATTCTTGGATCGAGAACCAGGCAGACTCGCTTTCAAA
CCTGAAGATGAAACTCAACCAGTCATTTTTAACGATCTTCCTGAGGAAATTCTCGTCGAGATAATTCATCTCTTG
GATCCTACGTCTATTGAAAGATTTGCGCAAGTCTCCAAGAAGGCCAGAATCGTAACACTGGAATCTTCTATCTGG
CGGAGTTTGGTTGTTTCGACGTATAAGGAACCTCAGATACCTGACTTGGACGTGTTGGCTGAAATTGTTTCGCGG
TATATGTTTGACTATCGACGGATATATATTGAACAACCTCGCGTGAGGCTCGATGGTGTATATATTGCCATATGC
CACTACGTACGACCAGGTTTAAGTGAAAACCACTGGGTAAACATGAACCATTTGATTACCTATCACCGTTACCTT
CGCTTTTACCCTAATGGCCAGGTCCTTTCTTTGCTCGCAAACGAGGAACATCCACCACAAACGATAATCAACATT
CTCAAACCGTCCCTCAGAATGAAGGGTTTATGCATCGGTATCTGGGAACTCACTGGAACGACTGTAACACTATCA
AACCTCTCCGACGCCAGTGGTCGATTTATAATTCCAGAAGAATTAGGAACCGAAACTGAATCCGGAACTTCGACT
AGTAAAGGAATTGAAATACCACCACCACCATCTACTACTACTCATCCAACATCACAACATCGTCCCAGTCATCAT
TTTCACTCACAAACTGAACTACAGCCCTCTCGATATGTTTTCTCCATGTCACTTTCTCTACGGTCTCGACCTTTA
GGAAGATGGAATAGGCTGGATATACAATCGTATGATACTCTCAATATTGAAACTGGTGATGTTACCCCTGTGGCA
CTTAAACATGAGAGATCGTTTTGGTTCTCGAGGGTTAGGTCTTATACATGA
Gene >Agabi119p4|091850
ATGGCCAACGGCAAGGCCAAAGCCACTGAGCTCTCGCCAGAGGAAGAGTCTCCAGAACTCGCAAGGTTCAGAGAG
GAATGGAAGGCTGAATTAGAGAGACGCAAACAAGCTACTCGGACTTCGTTGCAAACGCCCTCGTCATCCTCTACA
ACTCGACCGACTGAAGTCCCTCATATATTTCCTGCGCGCAGCACCAAGGAAACCCATGGTTCTTCTACTCCATTC
GATGGTCAACATCCGGCCATCACTCCCGACGGAGAGATACTTGACCAGAAACGTCCGAAGGCTTTATCGAGTGCA
CTCGGTGTCTATCGACAGGCAGTTCTTCACGAACAGGCTGGAGATCTAGATAGTGCTTTAATGTGCTATAGACAA
GCTTTTCGTACGGTACGTCGTTTCTACCATTTTATCGCTTATTCCTCACCAGTGACTTAGGAGCTCAACAGGATC
CTCACGTCGATCGTGCATACCGTCGCGAGGAAATGTTGAAGAACATGGTATACGAACAACAAGTTGTAAAGAAGG
ATCCCTCCACTCCATCTACAACCACCACCGCCTCTACTAACTCGGTTATGACTCGATCACCGGGTGGCATATCCG
AAATGACAGATGAGATTACAGAAACCATGAGGTTGTTGTCTATTAAATCTCAAACGCAAGCCATCGTAACCGGTA
CATTCGGTGCGCTCGTCGCGTCATTCTTGGATCGAGAACCAGGCAGACTCGCTTTCAAACCTGAAGATGAAACTC
AACCAGTCATTTTTAACGATCTTCCTGAGGAAATTCTCGTCGAGATAATTCATCTCTTGGATCCTACGTCTATTG
AAAGATTTGCGCAAGTCTCCAAGAAGGCCAGAATCGTAACACTGGAATCTTCTATCTGGCGGTACGTTGTAATAA
TTAACGAGCTATATTTAGCTTCTAACTTGCGACCATAATAGGAGTTTGGTTGTTTCGACGTATAAGGAACCTCAG
ATACCTGACTTGGACGTGTTGGCTGAAATTGTTTCGCGGTATATGTTTGACTATCGACGGATATATATTGAACAA
CCTCGCGTGAGGCTCGATGGTGTATATATTGCCATATGCCACTACGTGTGAGCACTTCACCTCAGTCTCTTTTGC
TTGGCCTAATCTTTTTCTGTTCCATAGACGACCAGGTTTAAGTGAAAACCACTGGGTAAACGTATGTCAGTATGC
GTTAAAAGTTTTCCCTTTCGTCTGAGAGTCTGCATAGATGAACCATTTGATTACCTATCACCGTTACCTGTAAGT
CGTCATCATCCTCTTTATCTTGCGTCTACTAAGCCTTTTGGTGTTTTCAGTCGCTTTTACCCTAATGGCCAGGTC
CTTTCTTTGCTCGCAAACGAGGAACATCCACCACAAACGATAATCAACATTCTCAAACCGTCCCTCAGAATGAAG
GTTAGTTAATCACTAATGCCAAAGGTTTCGTCTTTTCCTCTGATAACTTCAAAAGGGTTTATGCATCGGTATCTG
GGAACTCACTGGAACGACTGTAACACTATCAAACCTCTCCGACGCCAGTGGTCGATTTATAATTCCAGAAGAATT
AGGAACCGAAACTGAATCCGGAACTTCGACTAGTAAAGGAATTGAAATACCACCACCACCATCTACTACTACTCA
TCCAACATCACAACATCGTCCCAGTCATCATTTTCACTCACAAACTGAACTACAGCCCTCTCGATATGTTTTCTC
CATGTCACTTTCTCTACGGTCTCGACCTTTAGGAAGATGGAATAGGCTGGATATACAATCGTATGATACTCTCAA
TATTGAAACTGGTGATGTTACCCCTGTGGCACTTAAACATGAGAGATCGTTTTGGTTCTCGAGGGTTAGGTCTTA
TACATGA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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