Protein ID | Agabi119p4|091630 |
Gene name | |
Location | scaffold_06:877997..881121 |
Strand | + |
Gene length (bp) | 3124 |
Transcript length (bp) | 2400 |
Coding sequence length (bp) | 2400 |
Protein length (aa) | 800 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00400 | WD40 | WD domain, G-beta repeat | 5.6E-02 | 461 | 490 |
PF00400 | WD40 | WD domain, G-beta repeat | 8.6E-03 | 651 | 687 |
PF00400 | WD40 | WD domain, G-beta repeat | 2.2E-02 | 712 | 744 |
GO Term | Description | Terminal node |
---|---|---|
GO:0005515 | protein binding | Yes |
GO:0003674 | molecular_function | No |
GO:0005488 | binding | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 54 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Agabi119p4|091630 MSRFSNPSTNTREKYVRVDGTFKQIIDLDAKVEIDLTKDDDDDDDEVTFVGWKTSGSSIINSNRWKEGERRHAEK KVMKSNHRQNEAGVKPMGHEGQSSKMFEGRGASRPIFNANTSIRENSSVEEGPRSTIRPEINGLGTKRQRIEPVS QRNGRHVKRKAGWSPLNPYSSVKREFSEDLLTSSFQMDCDAENAAGPSQSAATSDMDCDGDNIPYDQRRGQVKIE PGYTSQLVTQKSWSRVGNSSQGPSLFPKSEVESSELKLWSKSNASIHFQVGEEQREDIGSDDDYEAIHSGLDIHD ESRWLLPPKNHARVENTGANKDLNETGVNPGETRIFRTSRTGNLMKPRNHGFIWDLMADLRQQPPSLRRYPPSRS IRGTDFGRIKSEKAMRVKESFKVAPGAINRIEQHDGWLAIASSCVGGQADEPDEEHNPYNRSGSLLTWNGQYHIL EKHFQENSYGKKHYTINDVKYSNSGHCFLSAGMDKKVCVWPRPEGARPYSGSYNLDVYDEGVPFEVVFQPGNGEA NVVAIGVQDIHVYANIEPNARKHKTVLNLVPNDHPTKHNAGVIRWDDINPHMLYASSEPQENLFDGVHKSFDVTK GKAKLTYNVNEAGDAMAINQVLALATRQESKNYLRIFDPFHKDCVQKVALETFSGNVPSREVSCMAFSPDGIYLA LARMDNSVHVYDSRMLSKGVMQKYQHEKPRFITKENHLCGVTHAQWVTKHSGQYALLSGGEDGCVRLWNPMWSSK EPSNGQKITEAHSDVGYFSVGDPFKNEHDLVIGDSSGEVTIYTGLLNHL* |
Coding | >Agabi119p4|091630 ATGAGTCGTTTCTCGAACCCATCAACAAACACAAGAGAAAAGTATGTTCGTGTAGATGGGACTTTTAAACAGATT ATAGACCTGGATGCCAAAGTCGAAATAGACTTGACAAAGGATGACGATGACGATGATGATGAAGTCACCTTCGTG GGATGGAAAACAAGTGGTTCTTCAATTATCAACAGTAATCGGTGGAAGGAGGGAGAACGAAGACATGCAGAAAAG AAGGTGATGAAGTCGAATCACAGACAAAACGAGGCTGGAGTAAAACCAATGGGACATGAGGGCCAGTCGAGTAAG ATGTTTGAAGGTCGTGGTGCTTCAAGGCCAATTTTCAACGCTAACACGAGTATAAGAGAGAATTCAAGTGTGGAA GAGGGTCCCCGCTCAACAATACGACCTGAAATAAACGGTCTGGGCACAAAACGACAGCGCATCGAACCGGTTTCC CAAAGGAATGGACGACATGTTAAACGGAAGGCAGGATGGTCACCATTGAATCCTTATTCGTCGGTCAAGCGGGAG TTTTCCGAAGACTTACTGACTAGTAGTTTCCAAATGGATTGCGATGCTGAGAATGCCGCTGGGCCTTCACAGTCT GCTGCTACATCTGACATGGACTGTGATGGCGATAACATTCCATATGACCAACGTCGAGGTCAAGTGAAGATTGAA CCTGGATATACGTCTCAACTTGTTACCCAAAAATCTTGGTCAAGAGTAGGAAATTCGAGCCAGGGTCCATCCTTG TTTCCGAAGTCAGAAGTTGAATCCTCCGAATTAAAACTCTGGTCGAAGAGCAATGCTTCCATCCACTTTCAAGTT GGTGAGGAACAGCGTGAAGATATTGGCTCAGATGATGATTATGAAGCTATACATAGCGGCTTGGATATTCATGAT GAGTCCCGGTGGCTGCTCCCACCGAAGAACCATGCACGCGTTGAAAATACTGGAGCCAACAAGGATCTCAATGAA ACCGGGGTGAATCCAGGAGAAACCAGGATCTTTAGGACATCAAGAACAGGAAACTTAATGAAGCCACGCAACCAC GGGTTCATATGGGACCTGATGGCAGACTTGAGACAACAACCTCCGTCTCTAAGGCGATACCCACCCTCAAGGTCA ATAAGAGGTACGGACTTCGGGAGAATTAAATCGGAAAAGGCAATGCGTGTCAAGGAATCTTTCAAGGTTGCCCCA GGGGCTATCAATCGGATAGAACAACACGACGGTTGGCTAGCCATCGCAAGTTCTTGCGTAGGAGGCCAAGCAGAT GAACCTGACGAGGAACATAATCCGTATAATAGGTCTGGCTCGTTGCTCACCTGGAATGGACAGTATCACATTCTC GAAAAACATTTTCAAGAGAACTCTTACGGCAAAAAACATTACACCATAAATGATGTTAAATACAGCAATTCGGGT CATTGTTTTCTCTCCGCAGGGATGGATAAGAAAGTTTGTGTTTGGCCACGGCCCGAAGGAGCTCGACCGTATTCT GGCAGTTATAACCTTGATGTATATGACGAAGGTGTGCCATTTGAAGTTGTGTTTCAGCCCGGAAATGGAGAAGCG AATGTCGTTGCCATTGGTGTACAGGATATACATGTTTATGCAAACATCGAGCCTAATGCTAGGAAGCACAAGACT GTTTTAAACTTGGTACCCAACGACCATCCGACAAAGCACAATGCAGGAGTAATTCGCTGGGACGACATCAACCCA CATATGTTATACGCGTCATCTGAACCGCAAGAAAATCTTTTCGACGGAGTGCATAAATCCTTTGATGTCACCAAA GGGAAAGCAAAATTGACGTATAATGTAAACGAAGCAGGTGACGCCATGGCCATCAATCAAGTTCTCGCGTTAGCC ACCAGGCAAGAATCCAAGAACTACCTACGTATATTCGATCCCTTTCACAAGGATTGTGTCCAAAAGGTTGCCCTA GAGACATTTTCGGGAAACGTTCCCAGTCGAGAGGTTTCTTGTATGGCTTTCAGCCCTGATGGAATTTATCTAGCT CTCGCACGCATGGATAATTCCGTGCATGTATACGATTCAAGAATGCTCAGCAAGGGCGTAATGCAAAAGTATCAA CACGAAAAACCCCGGTTCATCACCAAGGAAAACCATTTGTGCGGTGTTACACATGCACAGTGGGTTACTAAACAT TCAGGGCAGTATGCCCTGCTGAGTGGGGGCGAAGATGGATGCGTCCGATTATGGAATCCCATGTGGTCAAGCAAG GAACCTTCGAATGGTCAAAAAATTACCGAAGCCCATTCTGATGTTGGATATTTCTCGGTTGGAGATCCTTTCAAG AACGAGCATGATCTGGTTATCGGTGATTCCTCGGGTGAAGTCACAATATACACGGGGCTCCTTAATCATCTGTAA |
Transcript | >Agabi119p4|091630 ATGAGTCGTTTCTCGAACCCATCAACAAACACAAGAGAAAAGTATGTTCGTGTAGATGGGACTTTTAAACAGATT ATAGACCTGGATGCCAAAGTCGAAATAGACTTGACAAAGGATGACGATGACGATGATGATGAAGTCACCTTCGTG GGATGGAAAACAAGTGGTTCTTCAATTATCAACAGTAATCGGTGGAAGGAGGGAGAACGAAGACATGCAGAAAAG AAGGTGATGAAGTCGAATCACAGACAAAACGAGGCTGGAGTAAAACCAATGGGACATGAGGGCCAGTCGAGTAAG ATGTTTGAAGGTCGTGGTGCTTCAAGGCCAATTTTCAACGCTAACACGAGTATAAGAGAGAATTCAAGTGTGGAA GAGGGTCCCCGCTCAACAATACGACCTGAAATAAACGGTCTGGGCACAAAACGACAGCGCATCGAACCGGTTTCC CAAAGGAATGGACGACATGTTAAACGGAAGGCAGGATGGTCACCATTGAATCCTTATTCGTCGGTCAAGCGGGAG TTTTCCGAAGACTTACTGACTAGTAGTTTCCAAATGGATTGCGATGCTGAGAATGCCGCTGGGCCTTCACAGTCT GCTGCTACATCTGACATGGACTGTGATGGCGATAACATTCCATATGACCAACGTCGAGGTCAAGTGAAGATTGAA CCTGGATATACGTCTCAACTTGTTACCCAAAAATCTTGGTCAAGAGTAGGAAATTCGAGCCAGGGTCCATCCTTG TTTCCGAAGTCAGAAGTTGAATCCTCCGAATTAAAACTCTGGTCGAAGAGCAATGCTTCCATCCACTTTCAAGTT GGTGAGGAACAGCGTGAAGATATTGGCTCAGATGATGATTATGAAGCTATACATAGCGGCTTGGATATTCATGAT GAGTCCCGGTGGCTGCTCCCACCGAAGAACCATGCACGCGTTGAAAATACTGGAGCCAACAAGGATCTCAATGAA ACCGGGGTGAATCCAGGAGAAACCAGGATCTTTAGGACATCAAGAACAGGAAACTTAATGAAGCCACGCAACCAC GGGTTCATATGGGACCTGATGGCAGACTTGAGACAACAACCTCCGTCTCTAAGGCGATACCCACCCTCAAGGTCA ATAAGAGGTACGGACTTCGGGAGAATTAAATCGGAAAAGGCAATGCGTGTCAAGGAATCTTTCAAGGTTGCCCCA GGGGCTATCAATCGGATAGAACAACACGACGGTTGGCTAGCCATCGCAAGTTCTTGCGTAGGAGGCCAAGCAGAT GAACCTGACGAGGAACATAATCCGTATAATAGGTCTGGCTCGTTGCTCACCTGGAATGGACAGTATCACATTCTC GAAAAACATTTTCAAGAGAACTCTTACGGCAAAAAACATTACACCATAAATGATGTTAAATACAGCAATTCGGGT CATTGTTTTCTCTCCGCAGGGATGGATAAGAAAGTTTGTGTTTGGCCACGGCCCGAAGGAGCTCGACCGTATTCT GGCAGTTATAACCTTGATGTATATGACGAAGGTGTGCCATTTGAAGTTGTGTTTCAGCCCGGAAATGGAGAAGCG AATGTCGTTGCCATTGGTGTACAGGATATACATGTTTATGCAAACATCGAGCCTAATGCTAGGAAGCACAAGACT GTTTTAAACTTGGTACCCAACGACCATCCGACAAAGCACAATGCAGGAGTAATTCGCTGGGACGACATCAACCCA CATATGTTATACGCGTCATCTGAACCGCAAGAAAATCTTTTCGACGGAGTGCATAAATCCTTTGATGTCACCAAA GGGAAAGCAAAATTGACGTATAATGTAAACGAAGCAGGTGACGCCATGGCCATCAATCAAGTTCTCGCGTTAGCC ACCAGGCAAGAATCCAAGAACTACCTACGTATATTCGATCCCTTTCACAAGGATTGTGTCCAAAAGGTTGCCCTA GAGACATTTTCGGGAAACGTTCCCAGTCGAGAGGTTTCTTGTATGGCTTTCAGCCCTGATGGAATTTATCTAGCT CTCGCACGCATGGATAATTCCGTGCATGTATACGATTCAAGAATGCTCAGCAAGGGCGTAATGCAAAAGTATCAA CACGAAAAACCCCGGTTCATCACCAAGGAAAACCATTTGTGCGGTGTTACACATGCACAGTGGGTTACTAAACAT TCAGGGCAGTATGCCCTGCTGAGTGGGGGCGAAGATGGATGCGTCCGATTATGGAATCCCATGTGGTCAAGCAAG GAACCTTCGAATGGTCAAAAAATTACCGAAGCCCATTCTGATGTTGGATATTTCTCGGTTGGAGATCCTTTCAAG AACGAGCATGATCTGGTTATCGGTGATTCCTCGGGTGAAGTCACAATATACACGGGGCTCCTTAATCATCTGTAA |
Gene | >Agabi119p4|091630 ATGAGTCGTTTCTCGAACCCATCAACAAACACAAGAGAAAAGTATGTTCGTGTAGATGGGACTTTTAAACAGATT ATAGACCTGGATGCCAAAGTCGAAATAGACTTGACAAAGGATGACGATGACGATGATGATGAAGTCACCTTCGTG GGATGGAAAACAAGTGGTTCTTCAATTATCAACAGTAATCGGTGGAAGGAGGGAGAACGAAGACATGCAGAAAAG AAGGTGATGAAGTCGAATCACAGACAAAACGAGGCTGGAGTAAAACCAATGGGACATGAGGGCCAGTCGAGTAAG ATGTTTGAAGGTCGTGGTGCTTCAAGGTGGGTTCTCTTTCCCCATTGGGTGATTTAAAGCAGTCTAAAGGATATT CAATATCAGGCCAATTTTCAACGCTAACACGAGTATAAGAGAGAATTCAAGTGTGGAAGAGGGTCCCCGCTCAAC AATACGACCTGAAATAAACGGTCTGGGCACAAAACGACAGGTAAATACGACGATTGCCTTAATTGACCTCCACAT TTCACATTAATGACATTTTGCCTTGATGACATTTACGTATTTCAGCGCATCGAACCGGTTTCCCAAAGGAATGGA CGACATGTTAAACGGAAGGCAGGATGGTCACCATTGAATCCTTATTCGTCGGTCAAGCGGGAGTTTTCCGAAGAC TTACTGACTAGTAGTTTCCAAATGGATTGCGATGCTGAGAATGCCGCTGGGCCTTCACAGTCTGCTGCTACATCT GACATGGACTGTGATGGCGATAACATTCCATATGACCAACGTCGAGGTCAAGTGAAGATTGAACCTGGATATACG TCTCAACTTGTTACCCAAAAATCTTGGTCAAGAGTAGGAAATTCGAGCCAGGGTCCATCCTTGTTTCCGAAGTCA GAAGTTGAATCCTCCGAATTAAAACTCTGGTCGAAGAGCAATGCTTCCATCCACTTTCAAGTTGGTGAGGAACAG CGTGAAGATATTGGCTCAGATGATGATTATGAAGCTATACATAGCGGCTTGGATATTCATGATGAGTCCCGGGTG AGTCCTATCTCATACATAATGGTGTTGCATTATTTATCTTCTCTCGAAACTCTTGGCATAATAGTGGCTGCTCCC ACCGAAGAACCATGCACGCGTTGAAAATACTGGAGCCAACAAGGATCTCAATGAAACCGGGGTGAATCCAGGAGA AACCAGGATCTTTAGGACATCAAGAACAGGAAACTTAATGAAGCCACGCAACCACGGGTTCATATGGGACCTGGT ATGCTTGAACTTGTTTCCAAGCAAAGTCCTATTATTGATTATACCTTTAGATGGCAGACTTGAGACAACAACCTC CGTCTCTAAGGCGATACCCACCCTCAAGGTCAATAAGAGGTACGGACTTCGGGAGAATTAAATCGGAAAAGGCAA TGCGTGTCAAGGAATCTTTCAAGGTTGCCCCAGGGGGTATGTCTCCAACGACCACCTATACGCATGTTCCTGATG TGCATGAAAATAGCTATCAATCGGATAGAACAACACGACGGTTGGCTAGCCATCGCAAGTTCTTGCGTAGGAGGC CAAGCAGATGAACCTGACGGTTAGCTCATTCGAAATGTCGGATTTTCATTATGTAACTCAGTCTAATTATACAGA GGAACATAATCCGTATAATAGGTCTGGCTCGTTGCTCACCTGGAATGGACAGTATCACATTCTCGAAAAACATTT TCAAGAGAACTCTTACGGTATGAACATTACAAAGTAATATCCGCCAAGATCAACTCATGTCTTGCGCTAGGCAAA AAACATTACACCATAAATGATGTTAAATACAGCAATTCGGGGTAAGGGCAGTTACTTCTTACAGGCAGGAGACTT TACGCACTCATTTCTCCAAAGTCATTGTTTTCTCTCCGCAGGGATGGATAAGAAAGTTTGTGTTTGGCCACGGCC CGAAGGAGCTCGACCGTATTCTGGCAGTTATAACCGTGCGTGATTTCTTTTCAATCAATGCTTCAGGCTTACCAT TTGGCCAGTTGATGTATATGACGAAGGTGTGCCATTTGAAGTTGTGTTTCAGCCCGGAAATGGAGAAGCGAATGT CGTTGCCATTGGTGTACAGTGAGCAACTAAGTTTACGTTGAATTAATTCTGACCGTTGTCAAAGGGATATACATG TTTATGCAAACATCGAGCCTAATGCTAGGAAGCACAAGACTGTTTTAAACTTGGTACCCAACGACCATCCGACAA AGCACAATGCAGGAGTAATTCGCTGGGACGACATCAACCCACATATGTTATACGCGTCATCTGAACCGCAAGAAA ATCTTTTCGACGGAGTGCATAAATCCTTTGATGTCACCAAAGGGAAAGCAAAATTGACGTATAATGTAAACGAAG CAGGTGACGCCATGGCCATCAATCAAGGTATCTTCGATTGTGCTGTTGGATCAGTTCTAAGATTTATCATTTTCG TAGTTCTCGCGTTAGCCACCAGGCAAGAATCCAAGAACTACCTACGTATATTCGATCCCTTTCACAAGGATTGTG TCCAAAAGGTTGCCCTAGAGACATTTTCGGGAAACGTTCCCAGTCGAGAGGTTTCTTGTATGGCTTTCAGCCCTG ATGGAATTTATCTAGCTCTCGCACGCATGGATAATTCCGTGCATGTATACGATTCAAGAATGCTCAGCAAGGGCG TAATGCAAAAGTATCAACACGAAAAACCCCGGTTCATCACCAAGGAAAACCATTTGTGCGGTGTTACACATGCAC AGTGGGTTACTAAACATTCAGGGCAGTATGCCCTGCTGAGTGGGGGCGAAGATGGTGCGAATTTAATGCCATTGT CTTTATATCTAATATTCATGGGCAATTATCTAGGATGCGTCCGATTATGGAATCCCATGTGGTCAAGCAAGGAAC CTTCGAATGGTCAAAAAATTACCGAAGCCCATTCTGATGTTGGATATTTCTCGGTTGGAGATCCTTTCAAGAACG AGCATGATCTGGTTATGTAAGGAATCAATCTTTTCTTTTCGAGGATTGGATGTTGACCACCCCTCAAAGCGGTGA TTCCTCGGGTGAAGTCACAATATACACGGGGCTCCTTAATCATCTGTAA |