Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|090730
Gene name
Locationscaffold_06:621264..622783
Strand-
Gene length (bp)1519
Transcript length (bp)1041
Coding sequence length (bp)1041
Protein length (aa) 347

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00789 UBX UBX domain 7.8E-12 267 343

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q6GL77|UBXN1_XENTR UBX domain-containing protein 1 OS=Xenopus tropicalis GN=ubxn1 PE=2 SV=1 6 344 6.0E-27
sp|Q6NXA9|UBXN1_DANRE UBX domain-containing protein 1 OS=Danio rerio GN=ubxn1 PE=2 SV=1 6 345 3.0E-26
sp|Q10483|YDFB_SCHPO Uncharacterized protein C17C9.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17C9.11c PE=4 SV=2 99 343 4.0E-23
sp|Q6IP50|UBX1A_XENLA UBX domain-containing protein 1-A OS=Xenopus laevis GN=ubxn1-a PE=2 SV=1 6 344 9.0E-23
sp|Q6GLV4|UBX1B_XENLA UBX domain-containing protein 1-B OS=Xenopus laevis GN=ubxn1-b PE=2 SV=1 135 344 2.0E-20
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q6GL77|UBXN1_XENTR UBX domain-containing protein 1 OS=Xenopus tropicalis GN=ubxn1 PE=2 SV=1 6 344 6.0E-27
sp|Q6NXA9|UBXN1_DANRE UBX domain-containing protein 1 OS=Danio rerio GN=ubxn1 PE=2 SV=1 6 345 3.0E-26
sp|Q10483|YDFB_SCHPO Uncharacterized protein C17C9.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17C9.11c PE=4 SV=2 99 343 4.0E-23
sp|Q6IP50|UBX1A_XENLA UBX domain-containing protein 1-A OS=Xenopus laevis GN=ubxn1-a PE=2 SV=1 6 344 9.0E-23
sp|Q6GLV4|UBX1B_XENLA UBX domain-containing protein 1-B OS=Xenopus laevis GN=ubxn1-b PE=2 SV=1 135 344 2.0E-20
sp|Q922Y1|UBXN1_MOUSE UBX domain-containing protein 1 OS=Mus musculus GN=Ubxn1 PE=1 SV=1 6 344 2.0E-16
sp|Q499N6|UBXN1_RAT UBX domain-containing protein 1 OS=Rattus norvegicus GN=Ubxn1 PE=3 SV=2 6 344 2.0E-16
sp|Q32KW2|UBXN1_BOVIN UBX domain-containing protein 1 OS=Bos taurus GN=UBXN1 PE=2 SV=1 6 344 7.0E-11
sp|Q5R4I3|UBXN4_PONAB UBX domain-containing protein 4 OS=Pongo abelii GN=UBXN4 PE=2 SV=1 171 346 8.0E-10
sp|Q92575|UBXN4_HUMAN UBX domain-containing protein 4 OS=Homo sapiens GN=UBXN4 PE=1 SV=2 171 346 1.0E-09
sp|Q5HZY0|UBXN4_RAT UBX domain-containing protein 4 OS=Rattus norvegicus GN=Ubxn4 PE=1 SV=1 171 346 2.0E-09
sp|Q3ZBU9|UBXN4_BOVIN UBX domain-containing protein 4 OS=Bos taurus GN=UBXN4 PE=2 SV=2 171 346 3.0E-09
sp|Q8VCH8|UBXN4_MOUSE UBX domain-containing protein 4 OS=Mus musculus GN=Ubxn4 PE=1 SV=1 171 346 4.0E-09
sp|Q04323|UBXN1_HUMAN UBX domain-containing protein 1 OS=Homo sapiens GN=UBXN1 PE=1 SV=2 6 344 4.0E-08
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GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0003674 molecular_function No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 26 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|090730
MPSDKETLLGMGFDPARVEWAIKATAGRGLQPAMDHILENEGNPVPDLSSVSSAASSAPPAQPMDEDDQDDLEAL
SSLGVKGAAAAAAAAATDVEAKSIKCSQCGKIFKNTALANYHAEKSGHDQFEESTEEIKPLTEEEKQQKLEELKE
KMAAKRAAKAVEDAKEAKANELIRRKAGKDINQLREEIQAREARKEAEAMKREKAEEARAKAAVKAQIEADKKAR
AEKAAMEKALREGRAPPGASTPVNVPKPAAAASASTAGRDFKDTRLQIRMSTGGLPLTTTLSSDASLQEVAEYIA
GQDHNVNVETVTLAQHFPRKTFTRQEFSKSLRDLGLTPSAVLIATP*
Coding >Agabi119p4|090730
ATGCCATCCGATAAAGAAACTCTCCTCGGCATGGGCTTTGACCCAGCCCGGGTTGAATGGGCCATAAAAGCTACT
GCGGGAAGAGGCTTGCAGCCTGCAATGGACCACATTCTGGAAAACGAAGGCAATCCTGTACCAGATCTAAGCTCT
GTCTCTTCTGCAGCCAGTAGTGCACCACCAGCACAGCCAATGGACGAGGACGACCAAGATGACCTTGAAGCTCTC
AGTAGTCTGGGAGTCAAGGGCGCTGCTGCTGCTGCCGCTGCCGCTGCAACAGATGTCGAAGCCAAGAGCATTAAA
TGCTCCCAATGCGGCAAGATTTTCAAAAATACCGCTTTGGCAAATTACCACGCAGAGAAGAGTGGCCATGACCAA
TTCGAAGAGTCCACAGAAGAGATCAAACCTTTAACCGAAGAAGAGAAACAACAAAAACTTGAAGAGCTCAAGGAG
AAAATGGCTGCCAAGCGCGCTGCCAAGGCCGTAGAGGATGCCAAAGAAGCCAAAGCCAACGAGTTAATCCGGCGG
AAAGCTGGCAAGGATATAAATCAATTAAGAGAAGAAATCCAAGCAAGAGAGGCGCGAAAAGAAGCTGAAGCAATG
AAACGAGAAAAAGCCGAAGAGGCCCGTGCCAAAGCGGCCGTCAAAGCTCAAATCGAAGCAGACAAAAAGGCACGC
GCAGAGAAGGCTGCAATGGAAAAGGCATTGCGTGAAGGTCGTGCTCCACCAGGCGCAAGCACTCCGGTGAATGTG
CCGAAACCTGCCGCTGCGGCGTCGGCGAGTACAGCTGGACGAGATTTCAAAGATACTCGACTTCAAATCCGTATG
TCCACAGGAGGTTTACCGTTGACGACGACCCTATCCAGCGATGCTTCTCTCCAAGAAGTTGCAGAGTATATTGCC
GGCCAAGATCACAATGTGAATGTGGAAACTGTCACTTTGGCTCAACACTTCCCTCGGAAAACCTTCACACGTCAA
GAATTCTCAAAGTCTCTTCGCGATCTGGGTCTCACTCCTTCCGCCGTCCTCATCGCAACTCCATAA
Transcript >Agabi119p4|090730
ATGCCATCCGATAAAGAAACTCTCCTCGGCATGGGCTTTGACCCAGCCCGGGTTGAATGGGCCATAAAAGCTACT
GCGGGAAGAGGCTTGCAGCCTGCAATGGACCACATTCTGGAAAACGAAGGCAATCCTGTACCAGATCTAAGCTCT
GTCTCTTCTGCAGCCAGTAGTGCACCACCAGCACAGCCAATGGACGAGGACGACCAAGATGACCTTGAAGCTCTC
AGTAGTCTGGGAGTCAAGGGCGCTGCTGCTGCTGCCGCTGCCGCTGCAACAGATGTCGAAGCCAAGAGCATTAAA
TGCTCCCAATGCGGCAAGATTTTCAAAAATACCGCTTTGGCAAATTACCACGCAGAGAAGAGTGGCCATGACCAA
TTCGAAGAGTCCACAGAAGAGATCAAACCTTTAACCGAAGAAGAGAAACAACAAAAACTTGAAGAGCTCAAGGAG
AAAATGGCTGCCAAGCGCGCTGCCAAGGCCGTAGAGGATGCCAAAGAAGCCAAAGCCAACGAGTTAATCCGGCGG
AAAGCTGGCAAGGATATAAATCAATTAAGAGAAGAAATCCAAGCAAGAGAGGCGCGAAAAGAAGCTGAAGCAATG
AAACGAGAAAAAGCCGAAGAGGCCCGTGCCAAAGCGGCCGTCAAAGCTCAAATCGAAGCAGACAAAAAGGCACGC
GCAGAGAAGGCTGCAATGGAAAAGGCATTGCGTGAAGGTCGTGCTCCACCAGGCGCAAGCACTCCGGTGAATGTG
CCGAAACCTGCCGCTGCGGCGTCGGCGAGTACAGCTGGACGAGATTTCAAAGATACTCGACTTCAAATCCGTATG
TCCACAGGAGGTTTACCGTTGACGACGACCCTATCCAGCGATGCTTCTCTCCAAGAAGTTGCAGAGTATATTGCC
GGCCAAGATCACAATGTGAATGTGGAAACTGTCACTTTGGCTCAACACTTCCCTCGGAAAACCTTCACACGTCAA
GAATTCTCAAAGTCTCTTCGCGATCTGGGTCTCACTCCTTCCGCCGTCCTCATCGCAACTCCATAA
Gene >Agabi119p4|090730
ATGCCATCCGATAAAGAAACTCTCCTCGGCATGGGCTTTGACCCAGCCCGGGTTGAATGTTCGGGCCCTCTTCTC
ATGCAGCCGTCCCTACGCCCGCTGACCAAAGTCCCATAATCACAGGGGCCATAAAAGCTACTGCGGGAAGAGGCT
TGCAGCCTGCAATGGACCACATTCTGGAAAACGAAGGCAATCCTGTACCAGATCTAAGCTCTGTCTCTTCTGCAG
CCAGTAGTGCACCACCAGCACAGCCAATGGACGAGGACGACCAAGATGACCTTGAAGCTCTCAGTAGTCTGGGAG
TCAAGGGCGCTGCTGCTGCTGCCGCTGCCGCTGCAACAGATGTCGAAGCCAAGGCATGTGCGATCACAAGCCATA
ATCAGAAATGCCGTGATCAACTAACAACCGCTCATTAACCCTACAGAGCATTAAATGCTCCCAATGCGGCAAGAT
TTTCAAAAATACCGCTTTGGCAAATTACCACGCAGAGAAGAGTGGCCATGACCAATTCGAAGAGTCCACAGAAGA
GGTAAACATCGTACTTTCATCAACATATTATACACCACGACCTATTTTGGGCTATATGATAGATCAAACCTTTAA
CCGAAGAAGAGAAACAACAAAAACTTGAAGAGCTCAAGGAGAAAATGGCTGCCAAGCGCGCTGCCAAGGCCGTAG
AGGATGCCAAAGAAGCCAAAGCCAACGAGTTAATCCGGCGGAAAGCTGGCAAGGTTCGCCCTCATAACACCTGCT
CCCTCTCATTTTCTCAAGAATTGGGTCAGGATATAAATCAATTAAGAGAAGAAATCCAAGCAAGAGAGGCGCGAA
AAGAAGCTGAAGCAATGAAACGAGGTATCCATGATCATAGGACGTGCTTCGCAGCCTCATACTTAACTTCCGACC
GTCACTAGAAAAAGCCGAAGAGGCCCGTGCCAAAGCGGCCGTCAAAGCTCAAATCGAAGCAGACAAAAAGGCACG
CGCAGAGAAGGCTGCAATGGAAAAGGCATTGCGTGAAGGTCGTGCTCCACCAGGCGCAAGCACTCCGGTGAATGT
GCCGAAACCTGCCGCTGCGGCGTCGGCGAGTACAGCTGGACGAGATTTCAAAGATACTCGACTTCAAATCCGTAT
GTCCACAGGAGGTTTACCGTTGACGACGACCCTATCCAGCGATGCTTGTAAGTCGCATGTCCCTAAAATAAGTCG
TTAGCTTTATATTCAATGATCATCAACAGCTCTCCAAGAAGTTGCAGAGTATATTGCCGGCCAAGATCACAATGT
GAATGTGGAAACTGTCACTTTGGCTCAACACTTCCCTCGGTATGTTACTCAGTCTATTCTATTGACCCTGAAAAA
GCAACCACCTAAACACACAACGACAGGAAAACCTTCACACGTCAAGAATTCTCAAAGTCTCTTCGCGATCTGGGT
CTCACTCCTTCCGCCGTAAGTCGATCGATGTTTCTTCTCAACCGCGTTCAAGTTCGCAACCCTTATTATATAGGT
CCTCATCGCAACTCCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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