Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|089240
Gene name
Locationscaffold_06:278678..280114
Strand+
Gene length (bp)1436
Transcript length (bp)969
Coding sequence length (bp)969
Protein length (aa) 323

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13489 Methyltransf_23 Methyltransferase domain 1.4E-17 56 172
PF13847 Methyltransf_31 Methyltransferase domain 3.8E-12 58 159
PF08241 Methyltransf_11 Methyltransferase domain 1.1E-11 63 155
PF13649 Methyltransf_25 Methyltransferase domain 1.7E-11 62 151
PF08242 Methyltransf_12 Methyltransferase domain 1.3E-10 63 153
PF02390 Methyltransf_4 Putative methyltransferase 1.8E-05 59 94

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q1QEI9|UBIG_PSYCK Ubiquinone biosynthesis O-methyltransferase OS=Psychrobacter cryohalolentis (strain K5) GN=ubiG PE=3 SV=2 47 156 8.0E-09
sp|Q4FVG3|UBIG_PSYA2 Ubiquinone biosynthesis O-methyltransferase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=ubiG PE=3 SV=2 47 156 1.0E-08
sp|Q5QZ53|UBIG_IDILO Ubiquinone biosynthesis O-methyltransferase OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) GN=ubiG PE=3 SV=1 50 151 1.0E-08
sp|B3H0C8|UBIG_ACTP7 Ubiquinone biosynthesis O-methyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=ubiG PE=3 SV=1 41 156 3.0E-08
sp|A3MZ07|UBIG_ACTP2 Ubiquinone biosynthesis O-methyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=ubiG PE=3 SV=1 41 156 3.0E-08
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Swissprot ID Swissprot Description Start End E-value
sp|Q1QEI9|UBIG_PSYCK Ubiquinone biosynthesis O-methyltransferase OS=Psychrobacter cryohalolentis (strain K5) GN=ubiG PE=3 SV=2 47 156 8.0E-09
sp|Q4FVG3|UBIG_PSYA2 Ubiquinone biosynthesis O-methyltransferase OS=Psychrobacter arcticus (strain DSM 17307 / 273-4) GN=ubiG PE=3 SV=2 47 156 1.0E-08
sp|Q5QZ53|UBIG_IDILO Ubiquinone biosynthesis O-methyltransferase OS=Idiomarina loihiensis (strain ATCC BAA-735 / DSM 15497 / L2-TR) GN=ubiG PE=3 SV=1 50 151 1.0E-08
sp|B3H0C8|UBIG_ACTP7 Ubiquinone biosynthesis O-methyltransferase OS=Actinobacillus pleuropneumoniae serotype 7 (strain AP76) GN=ubiG PE=3 SV=1 41 156 3.0E-08
sp|A3MZ07|UBIG_ACTP2 Ubiquinone biosynthesis O-methyltransferase OS=Actinobacillus pleuropneumoniae serotype 5b (strain L20) GN=ubiG PE=3 SV=1 41 156 3.0E-08
sp|Q2L2T5|UBIG_BORA1 Ubiquinone biosynthesis O-methyltransferase OS=Bordetella avium (strain 197N) GN=ubiG PE=3 SV=1 48 156 4.0E-08
sp|B0TT38|UBIG_SHEHH Ubiquinone biosynthesis O-methyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) GN=ubiG PE=3 SV=1 50 156 7.0E-08
sp|B1Y2L3|UBIG_LEPCP Ubiquinone biosynthesis O-methyltransferase OS=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) GN=ubiG PE=3 SV=1 50 156 8.0E-08
sp|Q7VKW2|UBIG_HAEDU Ubiquinone biosynthesis O-methyltransferase OS=Haemophilus ducreyi (strain 35000HP / ATCC 700724) GN=ubiG PE=3 SV=1 62 156 9.0E-08
sp|A8H499|UBIG_SHEPA Ubiquinone biosynthesis O-methyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ubiG PE=3 SV=1 50 156 1.0E-07
sp|Q7WGT9|UBIG_BORBR Ubiquinone biosynthesis O-methyltransferase OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) GN=ubiG PE=3 SV=2 50 156 1.0E-07
sp|Q7VZG7|UBIG_BORPE Ubiquinone biosynthesis O-methyltransferase OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) GN=ubiG PE=3 SV=1 50 156 3.0E-07
sp|A1TSA0|UBIG_ACIAC Ubiquinone biosynthesis O-methyltransferase OS=Acidovorax citrulli (strain AAC00-1) GN=ubiG PE=3 SV=1 62 156 3.0E-07
sp|Q9CMI6|UBIG_PASMU Ubiquinone biosynthesis O-methyltransferase OS=Pasteurella multocida (strain Pm70) GN=ubiG PE=3 SV=1 50 156 6.0E-07
sp|Q7NZ91|UBIG_CHRVO Ubiquinone biosynthesis O-methyltransferase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiG PE=3 SV=1 62 156 6.0E-07
sp|Q6FFY1|UBIG_ACIAD Ubiquinone biosynthesis O-methyltransferase OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=ubiG PE=3 SV=1 50 156 9.0E-07
sp|A9M0C4|UBIG_NEIM0 Ubiquinone biosynthesis O-methyltransferase OS=Neisseria meningitidis serogroup C (strain 053442) GN=ubiG PE=3 SV=1 62 156 1.0E-06
sp|Q7N2M5|UBIG_PHOLL Ubiquinone biosynthesis O-methyltransferase OS=Photorhabdus luminescens subsp. laumondii (strain TT01) GN=ubiG PE=3 SV=1 50 156 1.0E-06
sp|Q9JXI7|UBIG_NEIMB Ubiquinone biosynthesis O-methyltransferase OS=Neisseria meningitidis serogroup B (strain MC58) GN=ubiG PE=3 SV=2 62 156 1.0E-06
sp|B0UUV6|UBIG_HISS2 Ubiquinone biosynthesis O-methyltransferase OS=Histophilus somni (strain 2336) GN=ubiG PE=3 SV=1 43 156 1.0E-06
sp|C3K6J1|UBIG_PSEFS Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=ubiG PE=3 SV=1 62 151 1.0E-06
sp|Q8PK00|UBIG_XANAC Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas axonopodis pv. citri (strain 306) GN=ubiG PE=3 SV=1 62 156 2.0E-06
sp|Q21UL3|UBIG_RHOFT Ubiquinone biosynthesis O-methyltransferase OS=Rhodoferax ferrireducens (strain ATCC BAA-621 / DSM 15236 / T118) GN=ubiG PE=3 SV=1 28 156 2.0E-06
sp|Q5PCY1|UBIG_SALPA Ubiquinone biosynthesis O-methyltransferase OS=Salmonella paratyphi A (strain ATCC 9150 / SARB42) GN=ubiG PE=3 SV=1 62 151 2.0E-06
sp|Q7W5Z6|UBIG_BORPA Ubiquinone biosynthesis O-methyltransferase OS=Bordetella parapertussis (strain 12822 / ATCC BAA-587 / NCTC 13253) GN=ubiG PE=3 SV=2 50 149 2.0E-06
sp|Q0I3Y4|UBIG_HAES1 Ubiquinone biosynthesis O-methyltransferase OS=Haemophilus somnus (strain 129Pt) GN=ubiG PE=3 SV=1 43 156 2.0E-06
sp|B5BCS0|UBIG_SALPK Ubiquinone biosynthesis O-methyltransferase OS=Salmonella paratyphi A (strain AKU_12601) GN=ubiG PE=3 SV=1 62 151 2.0E-06
sp|Q9JWE6|UBIG_NEIMA Ubiquinone biosynthesis O-methyltransferase OS=Neisseria meningitidis serogroup A / serotype 4A (strain Z2491) GN=ubiG PE=3 SV=1 62 156 3.0E-06
sp|Q3BSF8|UBIG_XANC5 Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ubiG PE=3 SV=1 62 156 3.0E-06
sp|A9L2Y4|UBIG_SHEB9 Ubiquinone biosynthesis O-methyltransferase OS=Shewanella baltica (strain OS195) GN=ubiG PE=3 SV=1 50 156 3.0E-06
sp|A6WNN7|UBIG_SHEB8 Ubiquinone biosynthesis O-methyltransferase OS=Shewanella baltica (strain OS185) GN=ubiG PE=3 SV=1 50 156 3.0E-06
sp|A3D499|UBIG_SHEB5 Ubiquinone biosynthesis O-methyltransferase OS=Shewanella baltica (strain OS155 / ATCC BAA-1091) GN=ubiG PE=3 SV=1 50 156 3.0E-06
sp|B8EA88|UBIG_SHEB2 Ubiquinone biosynthesis O-methyltransferase OS=Shewanella baltica (strain OS223) GN=ubiG PE=3 SV=1 50 156 3.0E-06
sp|A1RJD1|UBIG_SHESW Ubiquinone biosynthesis O-methyltransferase OS=Shewanella sp. (strain W3-18-1) GN=ubiG PE=3 SV=1 50 156 3.0E-06
sp|A4Y759|UBIG_SHEPC Ubiquinone biosynthesis O-methyltransferase OS=Shewanella putrefaciens (strain CN-32 / ATCC BAA-453) GN=ubiG PE=3 SV=1 50 156 3.0E-06
sp|Q2Y6Z3|UBIG_NITMU Ubiquinone biosynthesis O-methyltransferase OS=Nitrosospira multiformis (strain ATCC 25196 / NCIMB 11849) GN=ubiG PE=3 SV=1 62 156 4.0E-06
sp|B0U3W1|UBIG_XYLFM Ubiquinone biosynthesis O-methyltransferase OS=Xylella fastidiosa (strain M12) GN=ubiG PE=3 SV=1 62 156 5.0E-06
sp|A1K8Q1|UBIG_AZOSB Ubiquinone biosynthesis O-methyltransferase OS=Azoarcus sp. (strain BH72) GN=ubiG PE=3 SV=1 50 156 5.0E-06
sp|Q9PAM5|UBIG_XYLFA Ubiquinone biosynthesis O-methyltransferase OS=Xylella fastidiosa (strain 9a5c) GN=ubiG PE=3 SV=1 62 156 5.0E-06
sp|B2I705|UBIG_XYLF2 Ubiquinone biosynthesis O-methyltransferase OS=Xylella fastidiosa (strain M23) GN=ubiG PE=3 SV=1 62 156 5.0E-06
sp|Q87BG5|UBIG_XYLFT Ubiquinone biosynthesis O-methyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ubiG PE=3 SV=1 62 156 5.0E-06
sp|A4VLX7|UBIG_PSEU5 Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas stutzeri (strain A1501) GN=ubiG PE=3 SV=1 50 151 5.0E-06
sp|Q8P8H2|UBIG_XANCP Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=ubiG PE=3 SV=1 62 156 6.0E-06
sp|B0RS27|UBIG_XANCB Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=ubiG PE=3 SV=1 62 156 6.0E-06
sp|Q4UVL4|UBIG_XANC8 Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ubiG PE=3 SV=1 62 156 6.0E-06
sp|B8F4B1|UBIG_HAEPS Ubiquinone biosynthesis O-methyltransferase OS=Haemophilus parasuis serovar 5 (strain SH0165) GN=ubiG PE=3 SV=1 62 156 8.0E-06
sp|Q0AA73|UBIG_ALKEH Ubiquinone biosynthesis O-methyltransferase OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) GN=ubiG PE=3 SV=1 50 156 8.0E-06
sp|B4EZ30|UBIG_PROMH Ubiquinone biosynthesis O-methyltransferase OS=Proteus mirabilis (strain HI4320) GN=ubiG PE=3 SV=1 50 156 9.0E-06
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GO

GO Term Description Terminal node
GO:0008176 tRNA (guanine-N7-)-methyltransferase activity Yes
GO:0006400 tRNA modification Yes
GO:0008168 methyltransferase activity Yes
GO:0090304 nucleic acid metabolic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0044238 primary metabolic process No
GO:0006396 RNA processing No
GO:0009451 RNA modification No
GO:0008173 RNA methyltransferase activity No
GO:0006807 nitrogen compound metabolic process No
GO:0008757 S-adenosylmethionine-dependent methyltransferase activity No
GO:0034470 ncRNA processing No
GO:0006399 tRNA metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0140101 catalytic activity, acting on a tRNA No
GO:0008152 metabolic process No
GO:0016740 transferase activity No
GO:0008033 tRNA processing No
GO:0003824 catalytic activity No
GO:0008150 biological_process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0034660 ncRNA metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0140098 catalytic activity, acting on RNA No
GO:0043170 macromolecule metabolic process No
GO:0044237 cellular metabolic process No
GO:0003674 molecular_function No
GO:0016423 tRNA (guanine) methyltransferase activity No
GO:0071704 organic substance metabolic process No
GO:0043412 macromolecule modification No
GO:0140640 catalytic activity, acting on a nucleic acid No
GO:0008175 tRNA methyltransferase activity No
GO:0016070 RNA metabolic process No
GO:0016741 transferase activity, transferring one-carbon groups No
GO:0009987 cellular process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 55 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|089240
MTTLVETKSSSVSYLLPKGGKTEFTRLDSQHRLWTLLVDGLYTPEIEEQIQQHMGQAKNPAILDVGCGSAIWSVE
MAERFPSAQVIGVDITTPNHRSFPSDFSFRNRDLVNGLPLEFKAKFDIIHCRTVCQHIPNPQALVDCMADCLKPD
GFLILADGDLSVGFDEDRKLLEPFIYDPSLSIQDNLKNTKGLSWHAGWLHAFSQSTRSVKYESPFTMAQKSKLLK
EPTIKDLWIPYGWEGKDVKNGKELGEVTAEDFKQIYQFSVNTVFNKLDIPLEIKNALVERGLTEVSKRKTYLIGL
YVVARKCSEAEIQSSIPRNGST*
Coding >Agabi119p4|089240
ATGACCACACTTGTGGAAACGAAAAGCTCATCTGTATCTTATCTCCTACCCAAAGGGGGGAAGACAGAATTCACC
AGACTCGACTCGCAACACAGATTATGGACTTTGTTGGTCGATGGACTATACACACCCGAAATCGAAGAGCAAATC
CAGCAACACATGGGACAGGCCAAAAATCCTGCTATTCTAGACGTCGGTTGTGGTTCAGCAATCTGGTCAGTTGAA
ATGGCCGAGCGTTTCCCTTCAGCTCAAGTGATAGGCGTGGACATAACTACTCCGAACCATAGATCTTTTCCATCG
GATTTCAGTTTCAGGAATCGCGACCTCGTTAATGGGCTTCCGCTTGAGTTTAAAGCCAAGTTCGACATAATTCAT
TGCAGAACCGTGTGTCAACATATACCCAATCCTCAGGCATTGGTAGACTGCATGGCTGATTGTCTTAAGCCAGAT
GGCTTCCTGATATTAGCAGACGGTGACTTATCCGTAGGATTCGATGAAGATCGGAAACTTCTGGAACCATTCATC
TATGATCCCTCGCTGAGCATCCAAGACAATCTAAAGAACACCAAAGGATTATCTTGGCATGCTGGTTGGTTACAC
GCATTCTCTCAATCAACCCGAAGCGTAAAATATGAGTCGCCTTTCACTATGGCTCAAAAATCAAAATTATTGAAG
GAGCCGACGATCAAAGATCTTTGGATTCCATATGGCTGGGAAGGGAAAGACGTGAAAAATGGAAAAGAATTGGGT
GAAGTAACAGCTGAGGATTTCAAACAAATTTATCAATTCAGCGTCAACACTGTTTTCAACAAGTTAGATATTCCC
TTGGAGATCAAAAATGCTCTCGTTGAGAGAGGGCTGACAGAGGTTAGTAAACGGAAAACGTATCTGATTGGTTTG
TACGTTGTCGCTAGGAAGTGCAGCGAAGCTGAGATTCAATCGTCTATACCGAGGAATGGCTCTACTTAA
Transcript >Agabi119p4|089240
ATGACCACACTTGTGGAAACGAAAAGCTCATCTGTATCTTATCTCCTACCCAAAGGGGGGAAGACAGAATTCACC
AGACTCGACTCGCAACACAGATTATGGACTTTGTTGGTCGATGGACTATACACACCCGAAATCGAAGAGCAAATC
CAGCAACACATGGGACAGGCCAAAAATCCTGCTATTCTAGACGTCGGTTGTGGTTCAGCAATCTGGTCAGTTGAA
ATGGCCGAGCGTTTCCCTTCAGCTCAAGTGATAGGCGTGGACATAACTACTCCGAACCATAGATCTTTTCCATCG
GATTTCAGTTTCAGGAATCGCGACCTCGTTAATGGGCTTCCGCTTGAGTTTAAAGCCAAGTTCGACATAATTCAT
TGCAGAACCGTGTGTCAACATATACCCAATCCTCAGGCATTGGTAGACTGCATGGCTGATTGTCTTAAGCCAGAT
GGCTTCCTGATATTAGCAGACGGTGACTTATCCGTAGGATTCGATGAAGATCGGAAACTTCTGGAACCATTCATC
TATGATCCCTCGCTGAGCATCCAAGACAATCTAAAGAACACCAAAGGATTATCTTGGCATGCTGGTTGGTTACAC
GCATTCTCTCAATCAACCCGAAGCGTAAAATATGAGTCGCCTTTCACTATGGCTCAAAAATCAAAATTATTGAAG
GAGCCGACGATCAAAGATCTTTGGATTCCATATGGCTGGGAAGGGAAAGACGTGAAAAATGGAAAAGAATTGGGT
GAAGTAACAGCTGAGGATTTCAAACAAATTTATCAATTCAGCGTCAACACTGTTTTCAACAAGTTAGATATTCCC
TTGGAGATCAAAAATGCTCTCGTTGAGAGAGGGCTGACAGAGGTTAGTAAACGGAAAACGTATCTGATTGGTTTG
TACGTTGTCGCTAGGAAGTGCAGCGAAGCTGAGATTCAATCGTCTATACCGAGGAATGGCTCTACTTAA
Gene >Agabi119p4|089240
ATGACCACACTTGTGGAAACGAAAAGCTCATCTGTACTTTCACATCCTTCCAACTCGAAGCCAGCTTCTGACTCA
AACTATTTCAGGTATCTTATCTCCTACCCAAAGGGGGGAAGACAGAATTCACCGTTCGTTTTTTTCCGAAGCGCC
CGCCTGAACCTCATTTAACTGACCATGCATGGCTTTCCAGAGACTCGACTCGCAACACAGATTATGGACTTTGTT
GGTCGATGGACTATACACACCCGAAATCGAAGAGCAAATCCAGCAACACATGGGACAGGCCAAAAATCCTGCTAT
TCTAGACGTCGGTTGTGGTTCAGCAATCTGGTAAGCAGTTGAGCTGGTGCTTGAATGTCTCATTGAATTGAAAAC
TCTGACAGGTCAGTTGAAATGGCCGAGCGTTTCCCTTCAGCTCAAGTGATAGGCGTGGACATAACTACTCCGAAC
CATAGGTAAGAGCTTTCCGTTTCTGAAGAGCATTTCAAGTGACGAAAATAACACGATTACAATCACTAGATCTTT
TCCATCGGATTTCAGGTTTGAATATTTGATCTTCGTCCCTTGACTCTTTGGCCTTACCGGACTATAATCTTTACA
GTTTCAGGAATCGCGACCTCGTTAATGGGCTTCCGCTTGAGTTTAAAGCCAAGTTCGACATAATTCATTGCAGAA
CCGTGTGTCAACATGTAGGTATACATTTTGGCCTGCGTAGAGTCCATCTTTGAGCGATAAGTAGATACCCAATCC
TCAGGCATTGGTAGACTGCATGGCTGATTGTCTTAAGCCAGGTGAGTAGCTCATCGACAGTTGTGATTGTGATCT
ATCATGAACTCACAATTGAACCGTATCCTCAAGATGGCTTCCTGATATTAGCAGACGGTGACTTATCCGTAGGAT
TCGATGAAGATCGGAAACTTCTGGAACCATTCATCTATGATCCCTCGCTGAGCATCCAAGACAATCTAAAGAACA
CCAAAGGATTATCTTGGCATGCTGGTTGGTTACACGCATTCTCTCAATCAACCCGAAGCGTAAAATATGAGTCGC
CTTTCACTATGGCTCAAAAATCAAAATTATTGAAGGAGCCGACGATCAAAGATCTTTGGATTCCATATGGCTGGG
AAGGGAAAGACGTGAAAAATGGAAAAGAATTGGGTGAAGTAACAGCTGAGGATTTCAAAGTAAGTCTAGCACCCG
AGACGTGAGTTTGACTAGACTAACTGTCTGTGGTATTACAGCAAATTTATCAATTCAGCGTCAACACTGTTTTCA
ACAAGTTAGATATTCCCTTGGAGATCAAAAATGCTCTCGTTGAGAGAGGGCTGACAGAGGTTAGTAAACGGAAAA
CGTATCTGATTGGTTTGTACGTTGTCGCTAGGAAGTGCAGCGAAGCTGAGATTCAATCGTCTATACCGAGGAATG
GCTCTACTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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