Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|088480
Gene name
Locationscaffold_06:13544..16453
Strand+
Gene length (bp)2909
Transcript length (bp)2403
Coding sequence length (bp)2403
Protein length (aa) 801

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 9.1E-21 192 348

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q09922|YAKB_SCHPO Uncharacterized transcriptional regulatory protein C1F7.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F7.11c PE=3 SV=1 6 547 1.0E-14
sp|O14130|YF54_SCHPO Uncharacterized transcriptional regulatory protein C3C7.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3C7.04 PE=3 SV=1 56 337 2.0E-12
sp|P28349|NIT4_NEUCR Nitrogen assimilation transcription factor nit-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nit-4 PE=3 SV=2 207 351 5.0E-09
sp|Q9UTN0|YII3_SCHPO Uncharacterized transcriptional regulatory protein C139.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC139.03 PE=3 SV=1 198 483 6.0E-09
sp|P39529|YJU6_YEAST Putative transcriptional regulatory protein YJL206C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJL206C PE=2 SV=1 133 361 2.0E-08
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q09922|YAKB_SCHPO Uncharacterized transcriptional regulatory protein C1F7.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC1F7.11c PE=3 SV=1 6 547 1.0E-14
sp|O14130|YF54_SCHPO Uncharacterized transcriptional regulatory protein C3C7.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3C7.04 PE=3 SV=1 56 337 2.0E-12
sp|P28349|NIT4_NEUCR Nitrogen assimilation transcription factor nit-4 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=nit-4 PE=3 SV=2 207 351 5.0E-09
sp|Q9UTN0|YII3_SCHPO Uncharacterized transcriptional regulatory protein C139.03 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC139.03 PE=3 SV=1 198 483 6.0E-09
sp|P39529|YJU6_YEAST Putative transcriptional regulatory protein YJL206C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YJL206C PE=2 SV=1 133 361 2.0E-08
sp|P87000|ACU15_NEUCR Transcriptional activator protein acu-15 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=acu-15 PE=1 SV=2 189 351 1.0E-06
sp|P36598|THI1_SCHPO Thiamine repressible genes regulatory protein thi1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=thi1 PE=1 SV=2 197 338 9.0E-06
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GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0003677 DNA binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0006807 nitrogen compound metabolic process No
GO:0046872 metal ion binding No
GO:1901360 organic cyclic compound metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0044238 primary metabolic process No
GO:0005488 binding No
GO:1901576 organic substance biosynthetic process No
GO:0009059 macromolecule biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0003676 nucleic acid binding No
GO:0097659 nucleic acid-templated transcription No
GO:0044249 cellular biosynthetic process No
GO:0008152 metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0003674 molecular_function No
GO:0019438 aromatic compound biosynthetic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0046914 transition metal ion binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0043170 macromolecule metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0043167 ion binding No
GO:0044237 cellular metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:0008150 biological_process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0016070 RNA metabolic process No
GO:0009987 cellular process No
GO:0009058 biosynthetic process No
GO:0097159 organic cyclic compound binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0043169 cation binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 14 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|088480
MARCRRRITHLTTRVRQLEDALAALQAQLSSDPHPLLADDLLADTHDDDPAPMLEDPTATQVIDAFGTLSISTHG
ISRFFGPTGGSESLLLAQIDPAVNPASAPLPTDSHTLLPELALFSQSFPFTPMGQPADVEHLIKSHLPPWNRAVA
LADTYFEQVSWIFHGVTQLQLKDDMLPVIYDKQKPIPGEDYSSPHDLALLFMIFAMGALVQAEPSNAQGEHFHQL
ARAALALQPILEKPSIVTIQTLHLMSIYNAMSGSDLKSETSMEMTWSLITLASHLSQTIGLHRDSARWGLSPKMV
QRRRILFWDLFVADVWQSLNTGRPPSFSLPYVDCAFPLQYNESDESEAGFEVWQFRFASECVAEVTSRTLTAEAP
SYATIMELDRKVRDFPLPEGLSNPSKNDIGASFQRCVLDHIKETVLMYMHRSFFAQAMIEQPLNPLKSAYAPSFT
AAYRAALTILKSIDEQFNLFPNSCSRFWTMWTFAFTAAVIFGTVVTRGPRSPLAQSAMAELEQALVLFTKASKYS
IRALKSLPVLTRLAEKARYALANAKASSAGDGWSNLPGEHDELSIFAGHTRFVSAAKGEGDRKSKETQQPSSSSQ
HTRQPQPPQPRQQPIYGWQHSEPTHFEYPYVPSERTVQRPPQHIEPSTSEDYSQWSTDPVILHPPARVSQPYALP
SDYRVQRRQHDDQIGTIELHPAYYPPPSTSTTYTSSVTHTHTSHLPPAAPYMYPPYPSSLPQQQHIPHRQQQQQQ
QPTYDHMQDVAELAYLGLASRDSRLDERWSSFMADSGLLEGFNYDSNQGR*
Coding >Agabi119p4|088480
ATGGCTCGTTGTCGACGGCGCATCACCCACCTCACTACCCGTGTTCGCCAGCTCGAGGACGCCCTCGCCGCCCTC
CAGGCCCAACTCTCCTCCGACCCACACCCCCTCCTCGCCGACGATCTCCTCGCCGACACCCACGACGATGACCCC
GCCCCCATGCTCGAAGACCCCACCGCCACCCAAGTCATCGATGCCTTTGGCACCCTTTCCATCTCTACCCATGGC
ATCTCTCGTTTCTTTGGCCCGACAGGCGGTTCAGAGTCCCTCCTCCTCGCCCAAATCGATCCTGCCGTCAATCCC
GCTTCAGCTCCCCTCCCTACCGATTCCCACACCCTCCTCCCGGAACTCGCCCTCTTTTCCCAATCCTTCCCCTTC
ACTCCCATGGGTCAACCAGCTGACGTCGAACATCTTATCAAGTCCCATCTTCCCCCCTGGAACCGTGCCGTCGCC
TTGGCAGACACCTATTTCGAGCAGGTCTCTTGGATCTTTCACGGCGTCACTCAACTCCAGCTCAAAGATGACATG
CTCCCCGTCATCTACGATAAACAGAAACCGATTCCGGGCGAAGACTACAGCAGTCCTCACGATCTCGCTCTCCTC
TTTATGATTTTTGCCATGGGAGCTTTGGTCCAGGCTGAACCCTCCAACGCCCAAGGCGAACACTTTCATCAACTC
GCACGAGCCGCCCTCGCCCTTCAACCCATTCTAGAAAAACCCTCGATTGTCACCATCCAAACCCTCCATCTCATG
AGCATCTACAATGCCATGAGTGGAAGCGATCTCAAGAGCGAGACCAGTATGGAAATGACGTGGTCTCTCATCACG
CTCGCCAGCCATCTCTCCCAGACTATTGGTCTTCACAGGGACAGCGCCCGATGGGGCTTATCTCCGAAGATGGTC
CAGCGACGCCGCATTCTTTTCTGGGACCTCTTTGTCGCTGACGTCTGGCAGAGTCTCAATACCGGACGTCCGCCT
TCATTTTCGCTTCCTTACGTCGACTGCGCTTTTCCTCTCCAATATAATGAATCAGACGAATCAGAAGCCGGCTTT
GAAGTCTGGCAATTTCGTTTTGCTTCCGAATGCGTAGCAGAAGTCACCTCTCGTACCCTCACAGCCGAGGCTCCG
AGTTATGCCACCATCATGGAACTCGACCGTAAAGTCCGCGACTTTCCTCTACCCGAGGGTTTATCCAATCCCTCC
AAAAACGACATTGGCGCTTCCTTCCAAAGATGTGTCCTTGATCATATCAAAGAGACCGTTCTCATGTATATGCAT
CGCAGCTTCTTTGCCCAGGCCATGATAGAACAGCCTCTCAATCCTCTCAAGTCTGCTTATGCTCCATCCTTCACT
GCCGCTTATCGTGCTGCCCTCACCATTCTCAAATCCATCGACGAACAATTCAATCTCTTTCCCAATTCATGTTCC
CGCTTTTGGACCATGTGGACGTTTGCTTTCACCGCCGCCGTCATTTTTGGAACAGTTGTTACCCGTGGTCCGCGC
TCTCCATTAGCTCAATCCGCAATGGCAGAACTCGAACAAGCTTTGGTTCTTTTCACTAAAGCTTCAAAATACAGT
ATCCGCGCCCTTAAATCCCTTCCTGTATTAACTCGACTGGCGGAAAAAGCGCGCTATGCGCTGGCCAATGCTAAA
GCCTCTTCTGCCGGCGATGGTTGGAGTAATCTTCCCGGAGAACATGATGAATTGAGTATCTTTGCTGGTCATACC
AGGTTCGTTTCGGCTGCCAAGGGTGAAGGTGACCGCAAGTCCAAGGAGACCCAACAACCTTCATCATCGTCTCAA
CACACTCGACAGCCGCAGCCGCCACAACCACGTCAACAACCGATTTATGGGTGGCAACACTCTGAGCCTACTCAC
TTTGAATACCCTTATGTGCCTTCTGAACGAACAGTGCAACGGCCACCGCAACACATTGAACCTTCGACTTCCGAG
GACTATTCTCAATGGTCGACTGATCCTGTTATCCTTCATCCGCCTGCTCGGGTATCTCAGCCTTATGCATTACCT
AGTGATTATCGTGTTCAACGACGTCAACACGACGATCAGATTGGTACGATTGAATTACACCCGGCGTATTATCCA
CCGCCTTCTACGTCGACGACGTATACGAGTTCAGTGACGCATACGCATACGTCTCACCTTCCTCCTGCTGCGCCG
TACATGTATCCCCCTTACCCTTCGTCTCTTCCCCAACAACAACATATACCCCATCGTCAACAACAACAACAACAA
CAACCTACTTACGATCATATGCAGGATGTCGCAGAACTTGCCTACTTGGGCCTTGCTTCTCGAGATTCGAGATTG
GATGAGCGTTGGAGTTCGTTTATGGCTGATTCAGGTTTATTGGAAGGATTTAATTATGATTCGAATCAAGGAAGA
TGA
Transcript >Agabi119p4|088480
ATGGCTCGTTGTCGACGGCGCATCACCCACCTCACTACCCGTGTTCGCCAGCTCGAGGACGCCCTCGCCGCCCTC
CAGGCCCAACTCTCCTCCGACCCACACCCCCTCCTCGCCGACGATCTCCTCGCCGACACCCACGACGATGACCCC
GCCCCCATGCTCGAAGACCCCACCGCCACCCAAGTCATCGATGCCTTTGGCACCCTTTCCATCTCTACCCATGGC
ATCTCTCGTTTCTTTGGCCCGACAGGCGGTTCAGAGTCCCTCCTCCTCGCCCAAATCGATCCTGCCGTCAATCCC
GCTTCAGCTCCCCTCCCTACCGATTCCCACACCCTCCTCCCGGAACTCGCCCTCTTTTCCCAATCCTTCCCCTTC
ACTCCCATGGGTCAACCAGCTGACGTCGAACATCTTATCAAGTCCCATCTTCCCCCCTGGAACCGTGCCGTCGCC
TTGGCAGACACCTATTTCGAGCAGGTCTCTTGGATCTTTCACGGCGTCACTCAACTCCAGCTCAAAGATGACATG
CTCCCCGTCATCTACGATAAACAGAAACCGATTCCGGGCGAAGACTACAGCAGTCCTCACGATCTCGCTCTCCTC
TTTATGATTTTTGCCATGGGAGCTTTGGTCCAGGCTGAACCCTCCAACGCCCAAGGCGAACACTTTCATCAACTC
GCACGAGCCGCCCTCGCCCTTCAACCCATTCTAGAAAAACCCTCGATTGTCACCATCCAAACCCTCCATCTCATG
AGCATCTACAATGCCATGAGTGGAAGCGATCTCAAGAGCGAGACCAGTATGGAAATGACGTGGTCTCTCATCACG
CTCGCCAGCCATCTCTCCCAGACTATTGGTCTTCACAGGGACAGCGCCCGATGGGGCTTATCTCCGAAGATGGTC
CAGCGACGCCGCATTCTTTTCTGGGACCTCTTTGTCGCTGACGTCTGGCAGAGTCTCAATACCGGACGTCCGCCT
TCATTTTCGCTTCCTTACGTCGACTGCGCTTTTCCTCTCCAATATAATGAATCAGACGAATCAGAAGCCGGCTTT
GAAGTCTGGCAATTTCGTTTTGCTTCCGAATGCGTAGCAGAAGTCACCTCTCGTACCCTCACAGCCGAGGCTCCG
AGTTATGCCACCATCATGGAACTCGACCGTAAAGTCCGCGACTTTCCTCTACCCGAGGGTTTATCCAATCCCTCC
AAAAACGACATTGGCGCTTCCTTCCAAAGATGTGTCCTTGATCATATCAAAGAGACCGTTCTCATGTATATGCAT
CGCAGCTTCTTTGCCCAGGCCATGATAGAACAGCCTCTCAATCCTCTCAAGTCTGCTTATGCTCCATCCTTCACT
GCCGCTTATCGTGCTGCCCTCACCATTCTCAAATCCATCGACGAACAATTCAATCTCTTTCCCAATTCATGTTCC
CGCTTTTGGACCATGTGGACGTTTGCTTTCACCGCCGCCGTCATTTTTGGAACAGTTGTTACCCGTGGTCCGCGC
TCTCCATTAGCTCAATCCGCAATGGCAGAACTCGAACAAGCTTTGGTTCTTTTCACTAAAGCTTCAAAATACAGT
ATCCGCGCCCTTAAATCCCTTCCTGTATTAACTCGACTGGCGGAAAAAGCGCGCTATGCGCTGGCCAATGCTAAA
GCCTCTTCTGCCGGCGATGGTTGGAGTAATCTTCCCGGAGAACATGATGAATTGAGTATCTTTGCTGGTCATACC
AGGTTCGTTTCGGCTGCCAAGGGTGAAGGTGACCGCAAGTCCAAGGAGACCCAACAACCTTCATCATCGTCTCAA
CACACTCGACAGCCGCAGCCGCCACAACCACGTCAACAACCGATTTATGGGTGGCAACACTCTGAGCCTACTCAC
TTTGAATACCCTTATGTGCCTTCTGAACGAACAGTGCAACGGCCACCGCAACACATTGAACCTTCGACTTCCGAG
GACTATTCTCAATGGTCGACTGATCCTGTTATCCTTCATCCGCCTGCTCGGGTATCTCAGCCTTATGCATTACCT
AGTGATTATCGTGTTCAACGACGTCAACACGACGATCAGATTGGTACGATTGAATTACACCCGGCGTATTATCCA
CCGCCTTCTACGTCGACGACGTATACGAGTTCAGTGACGCATACGCATACGTCTCACCTTCCTCCTGCTGCGCCG
TACATGTATCCCCCTTACCCTTCGTCTCTTCCCCAACAACAACATATACCCCATCGTCAACAACAACAACAACAA
CAACCTACTTACGATCATATGCAGGATGTCGCAGAACTTGCCTACTTGGGCCTTGCTTCTCGAGATTCGAGATTG
GATGAGCGTTGGAGTTCGTTTATGGCTGATTCAGGTTTATTGGAAGGATTTAATTATGATTCGAATCAAGGAAGA
TGA
Gene >Agabi119p4|088480
ATGGTGGGTGGTTTGATTCTCATCCTCTTATTTTTTAACACCCCCCAGGCTCGTTGTCGACGGGTCAAGGCACAC
GCTTCGTCCTCGCCGCCACCGAACATCTCCACCAGCGCATCACCCACCTCACTACCCGTGTTCGCCAGCTCGAGG
ACGCCCTCGCCGCCCTCCAGGCCCAACTCTCCTCCGACCCACACCCCCTCCTCGCCGACGATCTCCTCGCCGACA
CCCACGACGATGACCCCGCCCCCATGCTCGAAGACCCCACCGCCACCCAAGTCATCGATGCCTTTGGCACCCTTT
CCATCTCTACCCATGGCATCTCTCGTTTCTTTGGCCCGACAGGCGGTTCAGAGGTCCGTTCTCTTTATATCATTT
CTCCATCGTTCCCTCTCACCCGGGCCCTCGACAGTCCCTCCTCCTCGTAAGCACACAGCTGCTGCGCACGTCACC
CAGTATACTCATATTCTCCCATCCAGGCCCAAATCGATCCTGCCGTCAATCCCGCTTCAGCTCCCCTCCCTACCG
ATTCCCACACCCTCCTCCCGGAACTCGCCCTCTTTTCCCAATCCTTCCCCTTCACTCCCATGGGTCAACCAGCTG
ACGTCGAACATCTTATCAAGTCCCATCTTCCCCCCTGGAACCGTGCCGTCGCCTTGGCAGACACCTATTTCGAGC
AGGTCTCTTGGATCTTTCACGGCGTCACTCAACTCCAGCTCAAAGATGACATGCTCCCCGTCATCTACGATAAAC
AGAAACCGATTCCGGGCGAAGACTACAGCAGTCCTCACGATCTCGCTCTCCTCTTTATGATTTTTGCCATGGGAG
CTTTGGTCCAGGCTGAACCCTCCAACGCCCAAGGCGAACACTTTCATCAACTCGCACGAGCCGCCCTCGCCCTTC
AACCCATTCTAGAAAAACCCTCGATTGTCACCATCCAAACCCTCCATCTCATGAGCATCTACAATGCCATGAGTG
GAAGCGATCTCAAGAGCGAGACCAGTATGGAAATGACGTGGTCTCTCATCACGCTCGCCAGCCATCTCTCCCAGA
CTGTAGGTGCTTCGCCCCCACTTGTCCCAATCACCGCTCACGTCATCCACTAGATTGGTCTTCGTATGTTCTCTT
CCCATCTAATCTCTCGCTTCTTCTCATGGGAACTCAGACAGGGACAGCGCCCGATGGGGCTTATCTCCGAAGATG
GTCCAGCGACGCCGCATTCTTTTCTGGGACCTCTTTGTCGCTGACGTCTGGCAGGTGACCACCCATTCGCCTCAC
CTCGTGCTCCTTGGGCTCAATCTTGTTTCACAGAGTCTCAATACCGGACGTCCGCCTTCATTTTCGCTTCCTTAC
GTCGACTGCGCTTTTCCTCTCCAATATAATGAATCAGACGAATCAGAAGCCGGCTGTATGTCCTCCAAACTGTAA
TCTATCAAACCCTCACCTTTTTTCTAGTTGAAGTCTGGCAATTTCGTTTTGCTTCCGAATGCGTAGCAGAAGTCA
CCTCTCGTACCCTCACAGCCGAGGCTCCGAGTTATGCCACCATCATGGAACTCGACCGTAAAGTCCGCGACTTTC
CTCTACCCGAGGGTTTATCCAATCCCTCCAAAAACGACATTGGCGCTTCCTTCCAAAGATGTGTCCTTGATCATA
TCAAAGAGACCGGTCAGGGCCGCTTTTTCTCCCCCCTTCATGTCCATCCCTAATTGTCATTCTAGTTCTCATGTA
TATGCATCGCAGCTTCTTTGCCCAGGCCATGATAGAACAGCCTCTCAATCCTCTCAAGTCTGCTTATGCTCCATC
CTTCACTGCCGCTTATCGTGCTGCCCTCACCATTCTCAAATCCATCGACGAACAATTCAATCTCTTTCCCAATTC
ATGTTCCCGCTTTTGGACCATGTGGACGTTTGCTTTCACCGCCGCCGTAAGTTGCTTCAAATAGCCGATGTTTCT
GGTATCATATCTCTCTTCAGGTCATTTTTGGAACAGTTGTTACCCGTGGTCCGCGCTCTCCATTAGCTCAATCCG
CAATGGCAGAACTCGAACAAGCTTTGGTTCTTTTCACTAAAGCTTCAAAATACAGTATCCGCGCCCTTAAATCCC
TTCCTGTATTAACTCGACTGGCGGAAAAAGCGCGCTATGCGCTGGCCAATGCTAAAGCCTCTTCTGCCGGCGATG
GTTGGAGTAATCTTCCCGGAGAACATGATGAATTGAGTATCTTTGCTGGTCATACCAGGTTCGTTTCGGCTGCCA
AGGGTGAAGGTGACCGCAAGTCCAAGGAGACCCAACAACCTTCATCATCGTCTCAACACACTCGACAGCCGCAGC
CGCCACAACCACGTCAACAACCGATTTATGGGTGGCAACACTCTGAGCCTACTCACTTTGAATACCCTTATGTGC
CTTCTGAACGAACAGTGCAACGGCCACCGCAACACATTGAACCTTCGACTTCCGAGGACTATTCTCAATGGTCGA
CTGATCCTGTTATCCTTCATCCGCCTGCTCGGGTATCTCAGCCTTATGCATTACCTAGTGATTATCGTGTTCAAC
GACGTCAACACGACGATCAGATTGGTACGATTGAATTACACCCGGCGTATTATCCACCGCCTTCTACGTCGACGA
CGTATACGAGTTCAGTGACGCATACGCATACGTCTCACCTTCCTCCTGCTGCGCCGTACATGTATCCCCCTTACC
CTTCGTCTCTTCCCCAACAACAACATATACCCCATCGTCAACAACAACAACAACAACAACCTACTTACGATCATA
TGCAGGATGTCGCAGAACTTGCCTACTTGGGCCTTGCTTCTCGAGATTCGAGATTGGATGAGCGTTGGAGTTCGT
TTATGGCTGATTCAGGTTTATTGGAAGGATTTAATTATGATTCGAATCAAGGAAGATGA

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