© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Agabi119p4|088140 |
| Gene name | |
| Location | scaffold_05b:734280..735242 |
| Strand | - |
| Gene length (bp) | 962 |
| Transcript length (bp) | 735 |
| Coding sequence length (bp) | 735 |
| Protein length (aa) | 245 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF01753 | zf-MYND | MYND finger | 2.7E-10 | 30 | 71 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 34 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|088140 MATVCYSQPAAANYHTAPIHQHRQRGYRICDQCGAAETPTVRFRLCGGCMTTQYCSPDCQKIHWPAHRTICQHTA SQIACAKQQTPTSFGDENLAKSLRNFASAHTTLLGWAGFQALQLKRVPANVRQSALLVELDYHNHSEPHRRFSVA ATHVVPHQYIRDPLVMADIQRREERCRANGGIGTLLVILQCGGVSQVMPVEVDPPSKITWDTREDWETVLKHFVI EGRKDFKPISTSSRGVYYG* |
| Coding | >Agabi119p4|088140 ATGGCAACCGTCTGCTATTCTCAACCCGCCGCTGCTAACTACCACACCGCCCCCATCCATCAACACAGACAACGT GGCTACCGTATTTGTGACCAGTGCGGGGCTGCAGAGACACCTACTGTTCGGTTTAGGCTCTGCGGGGGTTGCATG ACAACCCAATACTGTTCACCAGACTGTCAAAAAATTCACTGGCCAGCTCATCGCACGATCTGTCAGCATACGGCA TCGCAGATAGCTTGCGCAAAACAACAGACTCCCACTTCATTCGGGGATGAGAATCTAGCAAAAAGTCTCCGCAAT TTCGCCTCAGCACACACAACGCTCCTGGGTTGGGCAGGCTTCCAAGCTCTCCAACTTAAGCGAGTTCCCGCGAAC GTGCGACAAAGTGCCCTACTTGTCGAGCTCGACTATCATAACCACTCGGAGCCTCATCGTCGCTTTTCCGTAGCA GCCACTCATGTTGTACCACACCAATACATTCGCGACCCACTCGTCATGGCCGACATCCAGCGTCGTGAGGAGAGA TGTAGAGCAAACGGTGGCATTGGAACACTTCTCGTCATTTTGCAATGCGGAGGCGTCAGTCAAGTCATGCCGGTG GAGGTAGATCCACCGAGCAAGATCACTTGGGATACTAGAGAGGACTGGGAAACAGTTCTCAAGCACTTCGTGATC GAAGGTAGAAAAGACTTCAAGCCCATATCAACATCATCTAGAGGGGTTTACTACGGGTGA |
| Transcript | >Agabi119p4|088140 ATGGCAACCGTCTGCTATTCTCAACCCGCCGCTGCTAACTACCACACCGCCCCCATCCATCAACACAGACAACGT GGCTACCGTATTTGTGACCAGTGCGGGGCTGCAGAGACACCTACTGTTCGGTTTAGGCTCTGCGGGGGTTGCATG ACAACCCAATACTGTTCACCAGACTGTCAAAAAATTCACTGGCCAGCTCATCGCACGATCTGTCAGCATACGGCA TCGCAGATAGCTTGCGCAAAACAACAGACTCCCACTTCATTCGGGGATGAGAATCTAGCAAAAAGTCTCCGCAAT TTCGCCTCAGCACACACAACGCTCCTGGGTTGGGCAGGCTTCCAAGCTCTCCAACTTAAGCGAGTTCCCGCGAAC GTGCGACAAAGTGCCCTACTTGTCGAGCTCGACTATCATAACCACTCGGAGCCTCATCGTCGCTTTTCCGTAGCA GCCACTCATGTTGTACCACACCAATACATTCGCGACCCACTCGTCATGGCCGACATCCAGCGTCGTGAGGAGAGA TGTAGAGCAAACGGTGGCATTGGAACACTTCTCGTCATTTTGCAATGCGGAGGCGTCAGTCAAGTCATGCCGGTG GAGGTAGATCCACCGAGCAAGATCACTTGGGATACTAGAGAGGACTGGGAAACAGTTCTCAAGCACTTCGTGATC GAAGGTAGAAAAGACTTCAAGCCCATATCAACATCATCTAGAGGGGTTTACTACGGGTGA |
| Gene | >Agabi119p4|088140 ATGGCAACCGTCTGCTATTCTCAACCCGCCGCTGCTAACTACCACACCGCCCCCATCCATCAACACAGACAACGT GGCTACCGTATTTGTGACCAGTGCGGGGCTGCAGAGACACCTACTGTTCGGTTTAGGCTCTGCGGGGGTTGCGTA CGTATAATTCTTCATTCCTCAATCATCTGCGGTCCTAACCACAGTGTTTTTCCAGATGACAACCCAATACTGTGT CAGTTTCCTTCAACCCTTTCCTTTGCGTTCTGTAGCTGACCCATCGATTCTAGTCACCAGACTGTCAAAAAATTC ACTGGCCAGCTCATCGCACGATCTGTCAGCATACGGCATCGCAGATAGCTTGCGCAAAACAACAGACTCCCACTT CATTCGGGGATGAGAATCTAGCAAAAAGTCTCCGCAATTTCGCCTCAGCACACACAACGCTCCTGGGTTGGGCAG GCTTCCAAGCTCTCCAACTTAAGCGAGTTCCCGCGAACGTGCGACAAAGTGCCCTACTTGTCGAGCTCGACTATC ATAACCACTCGGAGCCTCATCGTCGGTAAGTACCCGACTCCTTGCCCCGTCCACGCCGGTCCTGACAACGGAACA TAGCTTTTCCGTAGCAGCCACTCATGTTGTACCACACCAATACATTCGCGACCCACTCGTCATGGCCGACATCCA GCGTCGTGAGGAGAGATGTAGAGCAAACGGTGGCATTGGAACACTTCTCGTCATTTTGCAATGCGGAGGCGTCAG TCAAGTCATGCCGGTGGAGGTAGATCCACCGAGCAAGATCACTTGGGATACTAGAGAGGACTGGGAAACAGTTCT CAAGCACTTCGTGATCGAAGGTAGAAAAGACTTCAAGCCCATATCAACATCATCTAGAGGGTGAGTTTTCCTCAT GCACTTGCCTTCAATAATGGGCAATTGCTGACGTTCTTTCCTTCAGGGTTTACTACGGGTGA |