Fungal Genomics

General Properties

Protein ID	Agabi119p4|086500
Gene name
Location	scaffold_05b:384670..385423
Strand	-
Gene length (bp)	753
Transcript length (bp)	753
Coding sequence length (bp)	753
Protein length (aa)	251

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	1.7E-08	82	149

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	5820
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|086500
Agaricus bisporus var bisporus H97	AgabiH97|086500
Agaricus bisporus var burnettii H119p4	Agabi119p4|086500 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|086500 MSSPECPRCGYSRTRETEADLHSPSTINELSVWAQQEDLIAVQAELRRIEGSIFSLEQSISRLIEAKCIARRRVS IMQAATGRLPPEVLSIIFQLACPPIDFDTHYLGLEKPSNIFHTGQRFLYVLTAVSHHWRQVAFSTQQLWTSVRLE VDTLIAYSPVHKKLSLLDLHLQNTRNAPLSIELDFAHLPFTRYDSEDGSDSDMDADAIFDMRKKILRHLKPLQTV VFVDNSPHDTAPPSDQAAGRMASIS*
Coding	>Agabi119p4|086500 ATGTCAAGCCCCGAATGTCCCCGCTGTGGTTACAGTCGTACCCGGGAAACTGAGGCAGATCTCCATTCACCTTCC ACTATAAACGAGTTATCTGTGTGGGCTCAGCAGGAAGACCTTATAGCCGTTCAAGCTGAATTGCGTCGCATAGAG GGTTCAATCTTTTCTCTAGAACAATCTATCTCTCGCCTCATCGAAGCGAAGTGTATCGCTAGACGCAGAGTCAGC ATTATGCAAGCTGCGACGGGACGCTTACCACCGGAGGTTTTGTCCATCATTTTCCAATTAGCATGTCCACCCATT GACTTCGATACCCACTATCTCGGCCTGGAGAAACCAAGTAACATTTTTCATACAGGCCAGCGATTTCTTTATGTT CTAACTGCCGTATCCCATCATTGGCGGCAGGTCGCCTTTTCAACTCAACAACTTTGGACAAGCGTCAGACTCGAA GTTGATACCCTTATCGCCTACTCCCCAGTTCACAAGAAACTCTCGCTCCTTGATCTACACTTACAAAATACCCGA AATGCTCCACTTTCGATCGAGTTGGACTTCGCACATCTCCCCTTCACACGGTATGATTCCGAAGACGGGTCTGAT TCTGACATGGACGCTGATGCTATCTTTGACATGCGCAAGAAAATCCTTAGGCATTTGAAGCCTCTTCAGACAGTA GTGTTTGTCGACAATAGCCCCCATGATACGGCACCTCCTTCTGATCAGGCCGCCGGCAGAATGGCTTCCATTTCT TAA
Transcript	>Agabi119p4|086500 ATGTCAAGCCCCGAATGTCCCCGCTGTGGTTACAGTCGTACCCGGGAAACTGAGGCAGATCTCCATTCACCTTCC ACTATAAACGAGTTATCTGTGTGGGCTCAGCAGGAAGACCTTATAGCCGTTCAAGCTGAATTGCGTCGCATAGAG GGTTCAATCTTTTCTCTAGAACAATCTATCTCTCGCCTCATCGAAGCGAAGTGTATCGCTAGACGCAGAGTCAGC ATTATGCAAGCTGCGACGGGACGCTTACCACCGGAGGTTTTGTCCATCATTTTCCAATTAGCATGTCCACCCATT GACTTCGATACCCACTATCTCGGCCTGGAGAAACCAAGTAACATTTTTCATACAGGCCAGCGATTTCTTTATGTT CTAACTGCCGTATCCCATCATTGGCGGCAGGTCGCCTTTTCAACTCAACAACTTTGGACAAGCGTCAGACTCGAA GTTGATACCCTTATCGCCTACTCCCCAGTTCACAAGAAACTCTCGCTCCTTGATCTACACTTACAAAATACCCGA AATGCTCCACTTTCGATCGAGTTGGACTTCGCACATCTCCCCTTCACACGGTATGATTCCGAAGACGGGTCTGAT TCTGACATGGACGCTGATGCTATCTTTGACATGCGCAAGAAAATCCTTAGGCATTTGAAGCCTCTTCAGACAGTA GTGTTTGTCGACAATAGCCCCCATGATACGGCACCTCCTTCTGATCAGGCCGCCGGCAGAATGGCTTCCATTTCT TAA
Gene	>Agabi119p4|086500 ATGTCAAGCCCCGAATGTCCCCGCTGTGGTTACAGTCGTACCCGGGAAACTGAGGCAGATCTCCATTCACCTTCC ACTATAAACGAGTTATCTGTGTGGGCTCAGCAGGAAGACCTTATAGCCGTTCAAGCTGAATTGCGTCGCATAGAG GGTTCAATCTTTTCTCTAGAACAATCTATCTCTCGCCTCATCGAAGCGAAGTGTATCGCTAGACGCAGAGTCAGC ATTATGCAAGCTGCGACGGGACGCTTACCACCGGAGGTTTTGTCCATCATTTTCCAATTAGCATGTCCACCCATT GACTTCGATACCCACTATCTCGGCCTGGAGAAACCAAGTAACATTTTTCATACAGGCCAGCGATTTCTTTATGTT CTAACTGCCGTATCCCATCATTGGCGGCAGGTCGCCTTTTCAACTCAACAACTTTGGACAAGCGTCAGACTCGAA GTTGATACCCTTATCGCCTACTCCCCAGTTCACAAGAAACTCTCGCTCCTTGATCTACACTTACAAAATACCCGA AATGCTCCACTTTCGATCGAGTTGGACTTCGCACATCTCCCCTTCACACGGTATGATTCCGAAGACGGGTCTGAT TCTGACATGGACGCTGATGCTATCTTTGACATGCGCAAGAAAATCCTTAGGCATTTGAAGCCTCTTCAGACAGTA GTGTTTGTCGACAATAGCCCCCATGATACGGCACCTCCTTCTGATCAGGCCGCCGGCAGAATGGCTTCCATTTCT TAA