Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|082590
Gene name
Location	scaffold_05a:1192331..1193524
Strand	-
Gene length (bp)	1193
Transcript length (bp)	681
Coding sequence length (bp)	681
Protein length (aa)	227

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00789	UBX	UBX domain	3.8E-12	78	156

Swissprot hits

[Show all]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9BZE9\|ASPC1_HUMAN	Tether containing UBX domain for GLUT4 OS=Homo sapiens GN=ASPSCR1 PE=1 SV=1	24	223	6.0E-15
sp\|Q8VBT9\|ASPC1_MOUSE	Tether containing UBX domain for GLUT4 OS=Mus musculus GN=Aspscr1 PE=1 SV=1	24	223	2.0E-14
sp\|Q9BZV1\|UBXN6_HUMAN	UBX domain-containing protein 6 OS=Homo sapiens GN=UBXN6 PE=1 SV=1	4	178	4.0E-10
sp\|Q9LK22\|PUX1_ARATH	Plant UBX domain-containing protein 1 OS=Arabidopsis thaliana GN=PUX1 PE=1 SV=1	55	223	2.0E-08
sp\|Q99PL6\|UBXN6_MOUSE	UBX domain-containing protein 6 OS=Mus musculus GN=Ubxn6 PE=1 SV=1	11	178	1.0E-07

[Show all]

[Show less]

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9BZE9\|ASPC1_HUMAN	Tether containing UBX domain for GLUT4 OS=Homo sapiens GN=ASPSCR1 PE=1 SV=1	24	223	6.0E-15
sp\|Q8VBT9\|ASPC1_MOUSE	Tether containing UBX domain for GLUT4 OS=Mus musculus GN=Aspscr1 PE=1 SV=1	24	223	2.0E-14
sp\|Q9BZV1\|UBXN6_HUMAN	UBX domain-containing protein 6 OS=Homo sapiens GN=UBXN6 PE=1 SV=1	4	178	4.0E-10
sp\|Q9LK22\|PUX1_ARATH	Plant UBX domain-containing protein 1 OS=Arabidopsis thaliana GN=PUX1 PE=1 SV=1	55	223	2.0E-08
sp\|Q99PL6\|UBXN6_MOUSE	UBX domain-containing protein 6 OS=Mus musculus GN=Ubxn6 PE=1 SV=1	11	178	1.0E-07
sp\|P54730\|UBX4_YEAST	UBX domain-containing protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBX4 PE=1 SV=1	29	226	3.0E-06
sp\|Q2KIJ6\|UBXN6_BOVIN	UBX domain-containing protein 6 OS=Bos taurus GN=UBXN6 PE=2 SV=1	12	178	4.0E-06

[Show less]

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 20	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|082590 MVFLFQPGPLFKVFKPTDSQPRLPPPLPDEYFVPTAADLKDAQSTLTARTKALVDAPLQSRAVREAAEKSKRDRW PLTRIRIKFPDRTQLEKVFESTDKIKSVYAFVRELLKDDVKPIKFILYQSPPKRDFKVSDPKVKTLSLSELQLSP ASILLLRFEDESLNHVNITAPLLPEVLSKAIDLPIPPAPESASQKPSPTPIANSSSTTSKPLSSNKIPKWLKIGK K*
Coding	>Agabi119p4\|082590 ATGGTTTTTCTGTTTCAGCCTGGCCCCCTGTTCAAGGTTTTCAAGCCTACAGACTCTCAGCCTCGCCTTCCACCC CCCTTGCCCGATGAATACTTTGTACCAACAGCGGCAGACCTCAAAGACGCGCAATCCACTCTTACTGCCCGGACC AAAGCGTTGGTCGATGCTCCCCTTCAGTCTCGAGCAGTCAGGGAGGCTGCAGAGAAATCTAAGCGAGACCGATGG CCCTTGACGAGAATTCGAATCAAGTTCCCTGATCGCACACAGCTAGAGAAGGTCTTTGAATCCACTGACAAGATT AAGTCGGTCTACGCCTTCGTCAGAGAATTATTGAAGGACGACGTCAAACCCATAAAGTTCATCCTGTACCAATCT CCTCCGAAGCGTGATTTCAAAGTATCTGACCCTAAAGTCAAAACATTGTCCCTTTCAGAGCTCCAGCTGTCCCCA GCCTCAATCCTTCTTCTCCGTTTCGAGGACGAGAGTCTTAACCATGTGAACATCACGGCTCCTCTCCTGCCGGAA GTATTATCTAAAGCAATCGATTTGCCCATACCACCGGCCCCAGAAAGCGCTTCTCAGAAGCCATCCCCAACGCCT ATCGCGAACAGCTCGTCTACCACATCCAAACCGCTGTCAAGCAACAAGATACCCAAGTGGTTAAAGATCGGAAAG AAGTAA
Transcript	>Agabi119p4\|082590 ATGGTTTTTCTGTTTCAGCCTGGCCCCCTGTTCAAGGTTTTCAAGCCTACAGACTCTCAGCCTCGCCTTCCACCC CCCTTGCCCGATGAATACTTTGTACCAACAGCGGCAGACCTCAAAGACGCGCAATCCACTCTTACTGCCCGGACC AAAGCGTTGGTCGATGCTCCCCTTCAGTCTCGAGCAGTCAGGGAGGCTGCAGAGAAATCTAAGCGAGACCGATGG CCCTTGACGAGAATTCGAATCAAGTTCCCTGATCGCACACAGCTAGAGAAGGTCTTTGAATCCACTGACAAGATT AAGTCGGTCTACGCCTTCGTCAGAGAATTATTGAAGGACGACGTCAAACCCATAAAGTTCATCCTGTACCAATCT CCTCCGAAGCGTGATTTCAAAGTATCTGACCCTAAAGTCAAAACATTGTCCCTTTCAGAGCTCCAGCTGTCCCCA GCCTCAATCCTTCTTCTCCGTTTCGAGGACGAGAGTCTTAACCATGTGAACATCACGGCTCCTCTCCTGCCGGAA GTATTATCTAAAGCAATCGATTTGCCCATACCACCGGCCCCAGAAAGCGCTTCTCAGAAGCCATCCCCAACGCCT ATCGCGAACAGCTCGTCTACCACATCCAAACCGCTGTCAAGCAACAAGATACCCAAGTGGTTAAAGATCGGAAAG AAGTAA
Gene	>Agabi119p4\|082590 ATGGTGAGTCCTCGTCAGTGTTTTCTCACTCCTTAGGATGCTGTACATCGTAATTTGCGTTCGATAAACACCAGT CCTACACCAAAGGGACCGCTCGCCGGCGTGTCCTGGGTCGGGTGGAATGAGACAACTATTTACTCTCTGACTGCT GTTCTTGCTTTTGTCGTGGGCGTTCCGAGTGCTGAATAATGTGTTGCAGGTTTTTCTGTTGTAAATAGTGGTGTA CAGTAGTGCTTTTATCCATGTCTTCGCAACCGCCCGCAGAGTCCAGTCAGCCTGGCCCCCTGTTCAAGGTTTTCA AGCCTACAGACTCTCAGCCTCGCCTTCCACGTAGGCCTTATGTCTATCGTTCCAGGTCGCCTTGTTAAATACTAG TACTTAGCCCCCTTGCCCGATGAATACTTTGTACCAACAGCGGCAGACCTCAAAGACGCGCAATCCACTCTTACT GCCCGGACCAAAGCGTTGGTCGATGCTCCCCTTCAGTCTCGAGCAGTCAGGGAGGCTGCAGAGAAATCTAAGCGA GACCGATGGCCCTTGGTAGTAGACTCTCTATCTATTGGCGCGGACGACTAATCCAATCCCTAGACGAGAATTCGA ATCAAGTTCCCTGATCGCACACAGCTAGAGAAGGTCTTTGAATCCACTGACAAGATTAAGTCGGTCTACGCCTTC GTCAGAGAATTATTGAAGGACGACGTCAAACCCATAAAGTTCATCCTGTGTGAGTGGCCATATCTATGTTGTGGT TTACTTCCTAAGCTGCATATCCTCAGACCAATCTCCTCCGAAGCGTGATTTCAAAGTATCTGACCCTAAAGTCAA AACATTGTCCCTTTCAGAGCTCCAGCTGTCCCCAGCCTCAATCCTTCTTCTCCGTTTCGAGGACGAGAGTCTTAA CCGTGCGCCCTATTAACCTTTTGATATTAAGTATATCGACTCATCAGCCCCAATAGATGTGAACATCACGGCTCC TCTCCTGCCGGAAGTATTATCTAAAGCAATCGATTTGCCCATACCACCGGCCCCAGAAAGCGCTTCTCAGAAGCC ATCCCCAACGCCTATCGCGAACAGCTCGTCTACCACATCCAAACCGCTGTCAAGCAACAAGATACCCAAGTGGTT AAAGATCGGAAGTTAGTACATCTTGCTCTACTATAACATTTGACTTCATTTCATTTCTAGAGAAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail