Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|081510
Gene name
Locationscaffold_05a:912997..914620
Strand-
Gene length (bp)1623
Transcript length (bp)1098
Coding sequence length (bp)1098
Protein length (aa) 366

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00704 Glyco_hydro_18 Glycosyl hydrolases family 18 3.2E-23 32 278

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P29026|CHI1_RHIOL Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 SV=1 3 334 3.0E-106
sp|P29027|CHI2_RHIOL Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 SV=1 3 328 3.0E-102
sp|P29025|CHI1_RHINI Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1 6 333 1.0E-98
sp|P29029|CHIT_YEAST Endochitinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTS1 PE=1 SV=2 8 317 1.0E-74
sp|P40954|CHI3_CANAL Chitinase 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT3 PE=1 SV=2 22 336 3.0E-69
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P29026|CHI1_RHIOL Chitinase 1 OS=Rhizopus oligosporus GN=CHI1 PE=1 SV=1 3 334 3.0E-106
sp|P29027|CHI2_RHIOL Chitinase 2 OS=Rhizopus oligosporus GN=CHI2 PE=1 SV=1 3 328 3.0E-102
sp|P29025|CHI1_RHINI Chitinase 1 OS=Rhizopus niveus GN=CHI1 PE=3 SV=1 6 333 1.0E-98
sp|P29029|CHIT_YEAST Endochitinase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CTS1 PE=1 SV=2 8 317 1.0E-74
sp|P40954|CHI3_CANAL Chitinase 3 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT3 PE=1 SV=2 22 336 3.0E-69
sp|D4B4X4|CHI33_ARTBC Class III chitinase ARB_03514 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03514 PE=1 SV=2 1 330 4.0E-68
sp|Q12713|CHI33_TRIHA Endochitinase 33 OS=Trichoderma harzianum GN=chit33 PE=1 SV=1 19 328 5.0E-63
sp|P40953|CHI2_CANAL Chitinase 2 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT2 PE=1 SV=1 30 316 1.0E-60
sp|Q5AAH2|CHI1_CANAL Chitinase 1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876) GN=CHT1 PE=1 SV=1 31 329 5.0E-53
sp|P46876|CHI1_CANAX Chitinase 1 OS=Candida albicans GN=CHT1 PE=3 SV=2 31 329 8.0E-53
sp|P29024|CHIA_PHAAN Acidic endochitinase OS=Phaseolus angularis PE=2 SV=1 7 309 5.0E-51
sp|P19172|CHIA_ARATH Acidic endochitinase OS=Arabidopsis thaliana GN=CHIB1 PE=2 SV=2 1 308 6.0E-51
sp|P36910|CHIE_BETVU Acidic endochitinase SE2 OS=Beta vulgaris GN=SE2 PE=1 SV=1 4 327 3.0E-50
sp|E9ENC6|CHI3_METRA Endochitinase 3 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) GN=chi3 PE=3 SV=1 4 327 8.0E-50
sp|P29060|CHIA_TOBAC Acidic endochitinase OS=Nicotiana tabacum PE=1 SV=1 10 325 1.0E-49
sp|Q6QDR4|CHI3_METAN Endochitinase 3 (Fragment) OS=Metarhizium anisopliae GN=chi3 PE=1 SV=1 32 319 3.0E-48
sp|P23472|CHLY_HEVBR Hevamine-A OS=Hevea brasiliensis PE=1 SV=2 32 308 4.0E-48
sp|P51614|CHIT3_VITVI Acidic endochitinase OS=Vitis vinifera GN=CHIT3 PE=2 SV=1 12 308 7.0E-48
sp|P36908|CHIA_CICAR Acidic endochitinase OS=Cicer arietinum PE=2 SV=1 32 309 3.0E-45
sp|P29061|CHIB_TOBAC Basic endochitinase OS=Nicotiana tabacum PE=2 SV=1 31 329 6.0E-45
sp|Q9C105|YKT4_SCHPO Chitinase-like protein PB1E7.04c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB1E7.04c PE=3 SV=1 1 313 4.0E-42
sp|D4AT07|CHI1_ARTBC Probable endochitinase ARB_07371 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07371 PE=3 SV=1 1 310 4.0E-42
sp|Q873Y0|CHIA1_ASPFM Endochitinase A1 OS=Neosartorya fumigata GN=chiA1 PE=1 SV=1 3 344 8.0E-42
sp|P17541|CHIA_CUCSA Acidic endochitinase OS=Cucumis sativus PE=1 SV=1 15 327 8.0E-42
sp|Q4WEP7|CHIA1_ASPFU Endochitinase A1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=chiA1 PE=3 SV=1 3 344 8.0E-41
sp|Q1EAR5|CHI2_COCIM Endochitinase 2 OS=Coccidioides immitis (strain RS) GN=CTS2 PE=3 SV=2 1 319 1.0E-40
sp|P54197|CHI2_COCP7 Endochitinase 2 OS=Coccidioides posadasii (strain C735) GN=CTS2 PE=3 SV=2 9 319 1.0E-40
sp|G5EB30|CHIA1_EMENI Endochitinase A OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=chiA PE=1 SV=1 17 320 4.0E-39
sp|E9F9R9|CHI2_METRA Endochitinase 2 OS=Metarhizium robertsii (strain ARSEF 23 / ATCC MYA-3075) GN=chi2 PE=3 SV=2 34 325 4.0E-39
sp|Q92223|CHIA1_EMEND Endochitinase A OS=Emericella nidulans GN=chiA PE=2 SV=3 17 320 4.0E-39
sp|Q4U4T0|CHI2_METAN Endochitinase 2 OS=Metarhizium anisopliae GN=chi2 PE=1 SV=1 34 316 2.0E-38
sp|A2QUQ2|CHIA1_ASPNC Endochitinase A OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=ctcA PE=2 SV=1 21 317 5.0E-36
sp|P49347|CONB_CANEN Concanavalin B OS=Canavalia ensiformis PE=1 SV=1 5 309 2.0E-21
sp|Q53NL5|XIP2_ORYSJ Xylanase inhibitor protein 2 OS=Oryza sativa subsp. japonica GN=Chib3H-h PE=1 SV=1 32 309 3.0E-18
sp|Q7GCM7|XIP1_ORYSJ Xylanase inhibitor protein 1 OS=Oryza sativa subsp. japonica GN=RIXI PE=1 SV=1 3 309 1.0E-17
sp|Q8L5C6|XIP1_WHEAT Xylanase inhibitor protein 1 OS=Triticum aestivum GN=XIPI PE=1 SV=2 28 309 2.0E-16
[Show less]

GO

GO Term Description Terminal node
GO:0005975 carbohydrate metabolic process Yes
GO:0044238 primary metabolic process No
GO:0071704 organic substance metabolic process No
GO:0008150 biological_process No
GO:0008152 metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|081510
MTLIKNCLGLIASSFLFASGVLAFDNSRNDNVAVYWGQNSYGATHGSDTANWQKELSTYCQDDSIDAIPVAFLNV
FFSIGGQPEINLANICGGGTVFPGTNLANCQFLADDIRTCQSRGKIVTLSLGGASGAAFFTSDAQGEAFADTVWN
LFLGGSSSTRPFGNAVLDGVDLDIEGGGSTGFAAFVRRIRSRASGASKQYYVTAAPQCPFPDAFLGPVLNAVGFD
AVYVQFYNNFCGLTNFDNPNAWNFAAWDNWAKTQSPNRNVKIYIGAPASPTAAGSGFVDINRLSSIARTTRSQFS
SFGGVMLWDASQAVANNRFDRAIKAALRGGREAPKETDASSKDSKDGKDGKESPSAHVSSRSFRF*
Coding >Agabi119p4|081510
ATGACCCTAATTAAAAACTGCCTTGGTCTCATCGCTTCCTCCTTTCTATTCGCGTCCGGAGTATTAGCCTTCGAC
AACTCAAGGAACGATAATGTTGCTGTCTACTGGGGTCAAAATTCATACGGTGCCACTCACGGGAGTGACACAGCC
AACTGGCAAAAGGAACTGTCCACCTACTGTCAGGATGATTCGATTGACGCCATACCGGTGGCATTTTTAAACGTC
TTTTTCTCCATCGGAGGTCAACCTGAAATCAACTTGGCTAATATTTGCGGTGGCGGTACCGTATTCCCGGGCACT
AATCTGGCCAATTGTCAATTCCTTGCTGATGACATCAGGACTTGCCAATCTAGAGGGAAGATTGTTACTCTGAGC
TTAGGTGGTGCATCCGGCGCAGCTTTCTTTACCTCTGATGCCCAAGGCGAAGCTTTTGCCGACACTGTGTGGAAT
CTCTTCCTCGGTGGTTCAAGCTCTACCAGACCGTTTGGAAATGCCGTTTTGGATGGTGTCGACCTTGATATTGAA
GGAGGAGGAAGTACTGGATTCGCTGCCTTTGTCCGTCGCATCCGCTCGCGCGCATCGGGTGCGAGCAAGCAATAC
TATGTCACGGCCGCACCCCAATGCCCCTTCCCCGATGCATTTTTGGGTCCTGTTCTCAACGCAGTTGGTTTTGAT
GCTGTTTATGTCCAGTTCTATAATAACTTCTGCGGCCTTACCAATTTCGACAACCCCAATGCATGGAACTTCGCT
GCTTGGGATAACTGGGCCAAGACGCAGTCTCCGAACAGGAATGTCAAGATTTACATCGGTGCTCCGGCTTCTCCG
ACAGCTGCGGGTTCAGGATTTGTCGACATCAACAGGCTCAGCAGTATCGCACGTACCACCCGCTCCCAATTCTCG
TCGTTTGGTGGAGTTATGCTCTGGGACGCCTCCCAAGCCGTCGCCAACAATCGTTTCGACCGTGCTATCAAAGCT
GCCCTTCGCGGCGGTCGTGAAGCTCCAAAAGAAACTGATGCGTCTAGTAAAGACAGCAAAGATGGCAAAGACGGC
AAAGAGAGCCCTAGTGCACACGTATCGTCACGATCCTTTAGATTCTGA
Transcript >Agabi119p4|081510
ATGACCCTAATTAAAAACTGCCTTGGTCTCATCGCTTCCTCCTTTCTATTCGCGTCCGGAGTATTAGCCTTCGAC
AACTCAAGGAACGATAATGTTGCTGTCTACTGGGGTCAAAATTCATACGGTGCCACTCACGGGAGTGACACAGCC
AACTGGCAAAAGGAACTGTCCACCTACTGTCAGGATGATTCGATTGACGCCATACCGGTGGCATTTTTAAACGTC
TTTTTCTCCATCGGAGGTCAACCTGAAATCAACTTGGCTAATATTTGCGGTGGCGGTACCGTATTCCCGGGCACT
AATCTGGCCAATTGTCAATTCCTTGCTGATGACATCAGGACTTGCCAATCTAGAGGGAAGATTGTTACTCTGAGC
TTAGGTGGTGCATCCGGCGCAGCTTTCTTTACCTCTGATGCCCAAGGCGAAGCTTTTGCCGACACTGTGTGGAAT
CTCTTCCTCGGTGGTTCAAGCTCTACCAGACCGTTTGGAAATGCCGTTTTGGATGGTGTCGACCTTGATATTGAA
GGAGGAGGAAGTACTGGATTCGCTGCCTTTGTCCGTCGCATCCGCTCGCGCGCATCGGGTGCGAGCAAGCAATAC
TATGTCACGGCCGCACCCCAATGCCCCTTCCCCGATGCATTTTTGGGTCCTGTTCTCAACGCAGTTGGTTTTGAT
GCTGTTTATGTCCAGTTCTATAATAACTTCTGCGGCCTTACCAATTTCGACAACCCCAATGCATGGAACTTCGCT
GCTTGGGATAACTGGGCCAAGACGCAGTCTCCGAACAGGAATGTCAAGATTTACATCGGTGCTCCGGCTTCTCCG
ACAGCTGCGGGTTCAGGATTTGTCGACATCAACAGGCTCAGCAGTATCGCACGTACCACCCGCTCCCAATTCTCG
TCGTTTGGTGGAGTTATGCTCTGGGACGCCTCCCAAGCCGTCGCCAACAATCGTTTCGACCGTGCTATCAAAGCT
GCCCTTCGCGGCGGTCGTGAAGCTCCAAAAGAAACTGATGCGTCTAGTAAAGACAGCAAAGATGGCAAAGACGGC
AAAGAGAGCCCTAGTGCACACGTATCGTCACGATCCTTTAGATTCTGA
Gene >Agabi119p4|081510
ATGACCCTAATTAAAAACTGCCTTGGTCTCATCGCTTCCTCCTTTCTATTCGCGTCCGGAGTATTAGCCTTCGAC
AACTCAAGGAACGATAATGTATGATACTTCCGATCTTGGTCCTACACGCAACTCAGCATCTATTTATCTAGGTTG
CTGTGTATGAATTCGTTCAATACCGTGGTACCGCTTGGTAATTAATTTACCGGTTCTTTCCAGCTACTGGGGTCA
AAATTCATACGGTGCCACTCACGGGAGTGACACAGCCAACTGGCAAAAGGAACTGTCCACCTACTGTCAGGTAAA
GGGACTGAACGTATATATGCCTGCTACCATATTCAACTCTCAAACTCCAGGATGATTCGATTGACGCCATACCGG
TGGCATTTTTAAACGTCTTTTTCTCCATCGGAGGTCAACCTGAAATCAACTTGGCTAATGTGAATCTTCCACTCT
TGCATACTGCCATCCCGACTTACCGACCATCAGATTTGCGGTGGCGGTACCGTATTCCCGGGCACTAATCTGGCC
AATTGTCAATTCCTTGCTGATGACATCAGGACTTGCCAATCTAGAGGGAAGATTGTTACTCTGAGCTTAGGTGGT
GCATCCGGCGCAGCTTTCTTTACCTCTGATGCCCAAGGCGAAGCTTTTGCCGACACTGTGTGGAATCTCTTCCTC
GGTGGTTCAAGCTCTACCAGACCGTTTGGAAATGCCGTTTTGGATGGTGTCGACCTTGATATTGAAGGAGGAGGA
AGTACTGGATTCGCTGCCTTTGTCCGTCGCATCCGCTCGCGCGCATCGGGTGCGAGCAAGCAGTATGTGCTGCCG
ACTTTTACTCTTTCTCGAGTTTTGATCAAGTATCACAAGATACTATGTCACGGCCGCACCCCAATGCCCCTTCCC
CGATGCATTTTTGGGTCCTGTTCTCAACGCAGTTGGTTTTGATGCTGTTTATGTCCAGTGTGAGTCTCTGATTTT
GTTGTCGAAGCGACGCAACGCTCATGCAAACTCAAGTCTATAATAACTTCTGCGGGTAAGAGACGATGCGAATTC
ACTCGTTCTGCCTGTGTTAACTAGTATTTCAAGCCTTACCAATTTCGACAACCCCAATGTAAGTATAATTTTCAG
CACGGAAGAGACTCGCCAGTTGACCTCCTTCTCATAGGCATGGAACTTCGCTGCTTGGTGCGTATTATTTGGGAG
TAGAGCGAAAGGTAATATTGACGCTTTATAGGGATAACTGGGCCAAGACGCAGTCTCCGAACAGGAATGTCAAGA
TTTACATCGGTGCTCCGGCTTCTCCGACAGCTGCGGGTTCAGGATTTGTCGACATCAACAGGCTCAGCAGTATCG
CACGTACCACCCGCTCCCAATTCTCGTCGTTTGGTGGAGTTATGCTCTGGGACGCCTCCCAAGCCGTCGGTAAGA
ATTACGTCCCTTTGTAGTGACATTTTTTGATGCCGTTTGGAAGCCAACAATCGTTTCGACCGTGCTATCAAAGCT
GCCCTTCGCGGCGGTCGTGAAGCTCCAAAAGAAACTGATGCGTCTAGTAAAGACAGCAAAGATGGCAAAGACGGC
AAAGAGAGCCCTAGTGCACACGTATCGTCACGATCCTTTAGATTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail