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| Protein ID | Agabi119p4|081300 |
| Gene name | |
| Location | scaffold_05a:856615..857044 |
| Strand | + |
| Gene length (bp) | 429 |
| Transcript length (bp) | 267 |
| Coding sequence length (bp) | 267 |
| Protein length (aa) | 89 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05347 | Complex1_LYR | Complex 1 protein (LYR family) | 3.7E-09 | 8 | 59 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|B5XCZ6|LYRM5_SALSA | LYR motif-containing protein 5 OS=Salmo salar GN=lyrm5 PE=3 SV=1 | 3 | 81 | 4.0E-13 |
| sp|Q91V16|LYRM5_MOUSE | LYR motif-containing protein 5 OS=Mus musculus GN=Lyrm5 PE=1 SV=1 | 3 | 84 | 6.0E-13 |
| sp|A3KNJ8|LYM5B_DANRE | LYR motif-containing protein 5B OS=Danio rerio GN=lyrm5b PE=3 SV=1 | 3 | 84 | 3.0E-12 |
| sp|B5FXA0|LYRM5_TAEGU | LYR motif-containing protein 5 OS=Taeniopygia guttata GN=LYRM5 PE=3 SV=1 | 3 | 81 | 1.0E-11 |
| sp|Q503U1|LYM5A_DANRE | LYR motif-containing protein 5A OS=Danio rerio GN=lyrm5a PE=3 SV=1 | 4 | 81 | 1.0E-11 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|B5XCZ6|LYRM5_SALSA | LYR motif-containing protein 5 OS=Salmo salar GN=lyrm5 PE=3 SV=1 | 3 | 81 | 4.0E-13 |
| sp|Q91V16|LYRM5_MOUSE | LYR motif-containing protein 5 OS=Mus musculus GN=Lyrm5 PE=1 SV=1 | 3 | 84 | 6.0E-13 |
| sp|A3KNJ8|LYM5B_DANRE | LYR motif-containing protein 5B OS=Danio rerio GN=lyrm5b PE=3 SV=1 | 3 | 84 | 3.0E-12 |
| sp|B5FXA0|LYRM5_TAEGU | LYR motif-containing protein 5 OS=Taeniopygia guttata GN=LYRM5 PE=3 SV=1 | 3 | 81 | 1.0E-11 |
| sp|Q503U1|LYM5A_DANRE | LYR motif-containing protein 5A OS=Danio rerio GN=lyrm5a PE=3 SV=1 | 4 | 81 | 1.0E-11 |
| sp|Q6IPR1|LYRM5_HUMAN | LYR motif-containing protein 5 OS=Homo sapiens GN=LYRM5 PE=3 SV=2 | 20 | 84 | 8.0E-09 |
| sp|Q0VCR0|LYRM5_BOVIN | LYR motif-containing protein 5 OS=Bos taurus GN=LYRM5 PE=3 SV=1 | 20 | 84 | 3.0E-08 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 12 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|081300 MAGNLTRQRALALYKELRQLGRDYPDPAYDFNGRVRRLFEKNRNLTDRDEIEKALRMGEYIKKETLALYSLRKYR HLKRMYPDSMSDP* |
| Coding | >Agabi119p4|081300 ATGGCTGGTAACCTTACCCGCCAAAGGGCACTTGCTTTGTACAAGGAACTCCGTCAACTTGGGCGAGATTATCCA GATCCTGCTTACGACTTTAACGGAAGAGTGCGGAGACTGTTCGAAAAAAACAGGAACTTGACGGATCGGGATGAG ATTGAGAAGGCTCTTCGAATGGGAGAGTATATAAAGAAAGAAACCTTGGCACTCTATTCTCTTCGAAAATATAGA CATCTCAAGAGGATGTATCCAGACTCTATGTCGGATCCCTGA |
| Transcript | >Agabi119p4|081300 ATGGCTGGTAACCTTACCCGCCAAAGGGCACTTGCTTTGTACAAGGAACTCCGTCAACTTGGGCGAGATTATCCA GATCCTGCTTACGACTTTAACGGAAGAGTGCGGAGACTGTTCGAAAAAAACAGGAACTTGACGGATCGGGATGAG ATTGAGAAGGCTCTTCGAATGGGAGAGTATATAAAGAAAGAAACCTTGGCACTCTATTCTCTTCGAAAATATAGA CATCTCAAGAGGATGTATCCAGACTCTATGTCGGATCCCTGA |
| Gene | >Agabi119p4|081300 ATGGCTGGTAACCTTACCCGCCAAAGGGCACTTGCTTTGTACAAGGAACTCCGTCAACTTGGGCGAGATTATCCA GATCCTGCGTGAGTCTAACATTTGCCCTCAATGCCCACCTAGTCATCAACTCACCTTCGCCCCAAGTTACGACTT TAACGGAAGAGTGCGGAGACTGTTCGAAAGTATATCCGTGCCCCAGCTAGCTTTATAGCCTCTCGCTTATCACCA TAAAGAAAACAGGAACTTGACGGATCGGGATGAGATTGAGAAGGCTCTTCGAATGGGAGAGTATATAAAGAAAGG TGTGTATACGCCCCTATACTCCGTATCTCGGGTATTAAATAGTATTCGAAAGAAACCTTGGCACTCTATTCTCTT CGAAAATATAGACATCTCAAGAGGATGTATCCAGACTCTATGTCGGATCCCTGA |