© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|080750 |
| Gene name | |
| Location | scaffold_05a:720157..721016 |
| Strand | + |
| Gene length (bp) | 859 |
| Transcript length (bp) | 306 |
| Coding sequence length (bp) | 306 |
| Protein length (aa) | 102 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00887 | ACBP | Acyl CoA binding protein | 6.0E-29 | 4 | 83 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P82934|ACBP_CHAVI | Acyl-CoA-binding protein OS=Chaetophractus villosus GN=DBI PE=1 SV=2 | 4 | 86 | 3.0E-29 |
| sp|P07108|ACBP_HUMAN | Acyl-CoA-binding protein OS=Homo sapiens GN=DBI PE=1 SV=2 | 4 | 86 | 1.0E-28 |
| sp|P07107|ACBP_BOVIN | Acyl-CoA-binding protein OS=Bos taurus GN=DBI PE=1 SV=2 | 4 | 86 | 2.0E-28 |
| sp|P11030|ACBP_RAT | Acyl-CoA-binding protein OS=Rattus norvegicus GN=Dbi PE=1 SV=3 | 4 | 86 | 2.0E-27 |
| sp|P31786|ACBP_MOUSE | Acyl-CoA-binding protein OS=Mus musculus GN=Dbi PE=1 SV=2 | 4 | 86 | 2.0E-27 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|P82934|ACBP_CHAVI | Acyl-CoA-binding protein OS=Chaetophractus villosus GN=DBI PE=1 SV=2 | 4 | 86 | 3.0E-29 |
| sp|P07108|ACBP_HUMAN | Acyl-CoA-binding protein OS=Homo sapiens GN=DBI PE=1 SV=2 | 4 | 86 | 1.0E-28 |
| sp|P07107|ACBP_BOVIN | Acyl-CoA-binding protein OS=Bos taurus GN=DBI PE=1 SV=2 | 4 | 86 | 2.0E-28 |
| sp|P11030|ACBP_RAT | Acyl-CoA-binding protein OS=Rattus norvegicus GN=Dbi PE=1 SV=3 | 4 | 86 | 2.0E-27 |
| sp|P31786|ACBP_MOUSE | Acyl-CoA-binding protein OS=Mus musculus GN=Dbi PE=1 SV=2 | 4 | 86 | 2.0E-27 |
| sp|Q8WN94|ACBP_RABIT | Acyl-CoA-binding protein OS=Oryctolagus cuniculus GN=DBI PE=3 SV=3 | 4 | 86 | 2.0E-26 |
| sp|Q9TQX6|ACBP_CANLF | Acyl-CoA-binding protein OS=Canis lupus familiaris GN=DBI PE=1 SV=2 | 4 | 83 | 2.0E-26 |
| sp|P12026|ACBP_PIG | Acyl-CoA-binding protein OS=Sus scrofa GN=DBI PE=1 SV=2 | 4 | 86 | 3.0E-26 |
| sp|Q9PRL8|ACBP_CHICK | Acyl-CoA-binding protein OS=Gallus gallus GN=DBI PE=1 SV=1 | 4 | 86 | 9.0E-25 |
| sp|Q20507|ACBP3_CAEEL | Acyl-CoA-binding protein homolog 3 OS=Caenorhabditis elegans GN=acbp-3 PE=3 SV=2 | 1 | 83 | 4.0E-24 |
| sp|Q640U0|ACBD5_XENTR | Acyl-CoA-binding domain-containing protein 5 OS=Xenopus tropicalis GN=acbd5 PE=2 SV=1 | 3 | 88 | 2.0E-23 |
| sp|P45883|ACBP_PELRI | Acyl-CoA-binding protein homolog OS=Pelophylax ridibundus PE=1 SV=2 | 1 | 88 | 5.0E-23 |
| sp|Q641E3|ACBD5_XENLA | Acyl-CoA-binding domain-containing protein 5 OS=Xenopus laevis GN=acbd5 PE=2 SV=1 | 3 | 88 | 5.0E-22 |
| sp|Q502L1|ACB5A_DANRE | Acyl-CoA-binding domain-containing protein 5A OS=Danio rerio GN=acbd5a PE=2 SV=1 | 3 | 88 | 1.0E-21 |
| sp|Q5ZHQ6|ACBD5_CHICK | Acyl-CoA-binding domain-containing protein 5 OS=Gallus gallus GN=ACBD5 PE=2 SV=1 | 3 | 88 | 2.0E-21 |
| sp|Q8NC06|ACBD4_HUMAN | Acyl-CoA-binding domain-containing protein 4 OS=Homo sapiens GN=ACBD4 PE=1 SV=2 | 4 | 83 | 3.0E-20 |
| sp|Q5R7P6|ACBD4_PONAB | Acyl-CoA-binding domain-containing protein 4 OS=Pongo abelii GN=ACBD4 PE=2 SV=1 | 4 | 83 | 4.0E-20 |
| sp|P45882|ACBP_ANAPL | Acyl-CoA-binding protein OS=Anas platyrhynchos GN=DBI PE=3 SV=1 | 3 | 88 | 1.0E-19 |
| sp|Q39779|ACBP_GOSHI | Acyl-CoA-binding protein OS=Gossypium hirsutum PE=3 SV=1 | 1 | 89 | 2.0E-19 |
| sp|Q5XG73|ACBD5_MOUSE | Acyl-CoA-binding domain-containing protein 5 OS=Mus musculus GN=Acbd5 PE=1 SV=1 | 3 | 88 | 2.0E-19 |
| sp|Q6DGF9|ACBD4_RAT | Acyl-CoA-binding domain-containing protein 4 OS=Rattus norvegicus GN=Acbd4 PE=1 SV=1 | 4 | 83 | 3.0E-19 |
| sp|Q9D258|ACBD7_MOUSE | Acyl-CoA-binding domain-containing protein 7 OS=Mus musculus GN=Acbd7 PE=3 SV=2 | 1 | 88 | 3.0E-19 |
| sp|A0FKI7|ACBD5_RAT | Acyl-CoA-binding domain-containing protein 5 OS=Rattus norvegicus GN=Acbd5 PE=1 SV=1 | 3 | 88 | 6.0E-19 |
| sp|Q2KHT9|ACBD4_BOVIN | Acyl-CoA-binding domain-containing protein 4 OS=Bos taurus GN=ACBD4 PE=2 SV=1 | 4 | 83 | 8.0E-19 |
| sp|Q9Y7Z3|ACBP_SCHPO | Putative acyl-CoA-binding protein OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1539.06 PE=3 SV=1 | 5 | 80 | 2.0E-18 |
| sp|Q5R7V3|ACBD5_PONAB | Acyl-CoA-binding domain-containing protein 5 OS=Pongo abelii GN=ACBD5 PE=2 SV=1 | 3 | 88 | 2.0E-18 |
| sp|Q3SZF0|ACBD7_BOVIN | Acyl-CoA-binding domain-containing protein 7 OS=Bos taurus GN=ACBD7 PE=3 SV=1 | 1 | 88 | 3.0E-18 |
| sp|Q5T8D3|ACBD5_HUMAN | Acyl-CoA-binding domain-containing protein 5 OS=Homo sapiens GN=ACBD5 PE=1 SV=1 | 3 | 88 | 4.0E-18 |
| sp|Q8N6N7|ACBD7_HUMAN | Acyl-CoA-binding domain-containing protein 7 OS=Homo sapiens GN=ACBD7 PE=1 SV=1 | 1 | 88 | 5.0E-18 |
| sp|P31824|ACBP_MANSE | Acyl-CoA-binding protein homolog OS=Manduca sexta PE=3 SV=1 | 1 | 87 | 7.0E-18 |
| sp|P07106|ACBD5_BOVIN | Acyl-CoA-binding domain-containing protein 5 OS=Bos taurus GN=ACBD5 PE=2 SV=2 | 3 | 88 | 8.0E-18 |
| sp|O04066|ACBP_RICCO | Acyl-CoA-binding protein OS=Ricinus communis PE=3 SV=1 | 22 | 87 | 4.0E-17 |
| sp|P0C8L7|ACBP_HYPDU | Putative acyl-CoA-binding protein OS=Hypsibius dujardini PE=3 SV=1 | 1 | 93 | 6.0E-17 |
| sp|P42281|ACBP_DROME | Acyl-CoA-binding protein homolog OS=Drosophila melanogaster GN=Dbi PE=2 SV=1 | 6 | 80 | 8.0E-17 |
| sp|Q9MZG3|DBIL5_BOVIN | Diazepam-binding inhibitor-like 5 OS=Bos taurus GN=DBIL5 PE=2 SV=1 | 4 | 86 | 9.0E-17 |
| sp|Q39315|ACBP_BRANA | Acyl-CoA-binding protein OS=Brassica napus PE=3 SV=1 | 23 | 90 | 1.0E-16 |
| sp|O01805|ACBP1_CAEEL | Acyl-CoA-binding protein homolog 1 OS=Caenorhabditis elegans GN=acbp-1 PE=3 SV=1 | 7 | 87 | 2.0E-16 |
| sp|O22643|ACBP_FRIAG | Acyl-CoA-binding protein OS=Fritillaria agrestis GN=ACABP PE=3 SV=1 | 1 | 88 | 9.0E-16 |
| sp|P57752|ACBP6_ARATH | Acyl-CoA-binding domain-containing protein 6 OS=Arabidopsis thaliana GN=ACBP6 PE=1 SV=1 | 25 | 88 | 2.0E-15 |
| sp|Q66JD7|ACBD6_XENTR | Acyl-CoA-binding domain-containing protein 6 OS=Xenopus tropicalis GN=acbd6 PE=2 SV=1 | 4 | 86 | 6.0E-15 |
| sp|Q4V869|ACBD6_XENLA | Acyl-CoA-binding domain-containing protein 6 OS=Xenopus laevis GN=acbd6 PE=2 SV=1 | 4 | 86 | 8.0E-15 |
| sp|Q5RJK8|ACBD6_RAT | Acyl-CoA-binding domain-containing protein 6 OS=Rattus norvegicus GN=Acbd6 PE=1 SV=1 | 7 | 86 | 2.0E-14 |
| sp|P31787|ACBP_YEAST | Acyl-CoA-binding protein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=ACB1 PE=1 SV=3 | 22 | 80 | 3.0E-14 |
| sp|Q9D061|ACBD6_MOUSE | Acyl-CoA-binding domain-containing protein 6 OS=Mus musculus GN=Acbd6 PE=1 SV=2 | 7 | 86 | 4.0E-14 |
| sp|A5WV69|ACB5B_DANRE | Acyl-CoA-binding domain-containing protein 5-B OS=Danio rerio GN=acbd5b PE=3 SV=1 | 2 | 88 | 6.0E-14 |
| sp|P61867|ACBP2_SACPS | Acyl-CoA-binding protein 2 OS=Saccharomyces pastorianus GN=ACB2 PE=1 SV=2 | 22 | 80 | 8.0E-14 |
| sp|P61868|ACBP2_SACMO | Acyl-CoA-binding protein 2 OS=Saccharomyces pastorianus (strain ATCC 76670 / Carlsberg bottom yeast no.2 / CBS 1503 / CLIB 180 / NBRC 10610 / NRRL Y-1525) GN=ACB2 PE=3 SV=2 | 22 | 80 | 8.0E-14 |
| sp|P56702|DBIL5_RAT | Diazepam-binding inhibitor-like 5 OS=Rattus norvegicus GN=Dbil5 PE=2 SV=2 | 4 | 86 | 4.0E-13 |
| sp|Q9WUR2|ECI2_MOUSE | Enoyl-CoA delta isomerase 2, mitochondrial OS=Mus musculus GN=Eci2 PE=1 SV=2 | 4 | 81 | 7.0E-13 |
| sp|Q9BR61|ACBD6_HUMAN | Acyl-CoA-binding domain-containing protein 6 OS=Homo sapiens GN=ACBD6 PE=1 SV=1 | 7 | 86 | 7.0E-13 |
| sp|A2VDR2|ACBD6_BOVIN | Acyl-CoA-binding domain-containing protein 6 OS=Bos taurus GN=ACBD6 PE=2 SV=1 | 7 | 86 | 9.0E-13 |
| sp|O09035|DBIL5_MOUSE | Diazepam-binding inhibitor-like 5 OS=Mus musculus GN=Dbil5 PE=1 SV=1 | 4 | 86 | 1.0E-12 |
| sp|Q4V8X4|ACBD6_DANRE | Acyl-CoA-binding domain-containing protein 6 OS=Danio rerio GN=acbd6 PE=2 SV=1 | 6 | 86 | 3.0E-12 |
| sp|Q54GC8|ACBD6_DICDI | Acyl-CoA-binding domain-containing protein 6 homolog OS=Dictyostelium discoideum GN=acbd6 PE=3 SV=1 | 4 | 92 | 9.0E-12 |
| sp|Q5FXM5|ACBP_DICDI | Acyl-CoA-binding protein OS=Dictyostelium discoideum GN=acbA PE=1 SV=1 | 7 | 80 | 1.0E-11 |
| sp|Q5XIC0|ECI2_RAT | Enoyl-CoA delta isomerase 2, mitochondrial OS=Rattus norvegicus GN=Eci2 PE=1 SV=1 | 4 | 81 | 5.0E-11 |
| sp|O75521|ECI2_HUMAN | Enoyl-CoA delta isomerase 2, mitochondrial OS=Homo sapiens GN=ECI2 PE=1 SV=4 | 25 | 81 | 2.0E-10 |
| sp|Q9SM23|ACBP1_ARATH | Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana GN=ACBP1 PE=1 SV=2 | 30 | 86 | 2.0E-06 |
| sp|Q9STP8|ACBP2_ARATH | Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana GN=ACBP2 PE=1 SV=1 | 28 | 86 | 2.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0000062 | fatty-acyl-CoA binding | Yes |
| GO:0032559 | adenyl ribonucleotide binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0036094 | small molecule binding | No |
| GO:0017076 | purine nucleotide binding | No |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:1901681 | sulfur compound binding | No |
| GO:0097367 | carbohydrate derivative binding | No |
| GO:0005488 | binding | No |
| GO:0033218 | amide binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:0032553 | ribonucleotide binding | No |
| GO:0003674 | molecular_function | No |
| GO:0030554 | adenyl nucleotide binding | No |
| GO:1901567 | fatty acid derivative binding | No |
| GO:0032555 | purine ribonucleotide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0120227 | acyl-CoA binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|080750 MSYQAKFDKATSIVQNLPKGGPVQPTQDDQLFFYARFKQATIGDVNIPRPGMLDFTGKAKWDAWNEIKGKSKEDA MKEYVEKLLKLLEGNDQAHYDELNNA* |
| Coding | >Agabi119p4|080750 ATGTCTTATCAAGCTAAATTCGATAAAGCCACTTCGATTGTTCAGAATCTGCCGAAAGGCGGTCCGGTTCAACCT ACTCAAGATGATCAACTCTTTTTCTATGCTCGTTTCAAACAAGCGACGATCGGTGATGTGAATATCCCTCGACCT GGTATGCTCGATTTCACCGGTAAAGCCAAGTGGGACGCTTGGAATGAGATTAAAGGTAAATCGAAGGAAGACGCT ATGAAAGAATACGTCGAGAAACTTTTGAAGCTGTTGGAGGGTAACGACCAAGCCCATTATGATGAACTTAACAAT GCTTAA |
| Transcript | >Agabi119p4|080750 ATGTCTTATCAAGCTAAATTCGATAAAGCCACTTCGATTGTTCAGAATCTGCCGAAAGGCGGTCCGGTTCAACCT ACTCAAGATGATCAACTCTTTTTCTATGCTCGTTTCAAACAAGCGACGATCGGTGATGTGAATATCCCTCGACCT GGTATGCTCGATTTCACCGGTAAAGCCAAGTGGGACGCTTGGAATGAGATTAAAGGTAAATCGAAGGAAGACGCT ATGAAAGAATACGTCGAGAAACTTTTGAAGCTGTTGGAGGGTAACGACCAAGCCCATTATGATGAACTTAACAAT GCTTAA |
| Gene | >Agabi119p4|080750 ATGTCTTATCAAGCTAAATTCGATAAAGCCACTTCGATTGTTCAGAATCTGCCGAAAGGCGGTCCGGTTCAACCT ACTCAAGATGATCAACTCTTTGTACGTCGGTTGTCAGATCTTATCTTATCCCTCACGACTTTGTCGTACTTTTTG CTATGTGACAAAGTAAACTGATTTGCAACTTGTCTACATACATACGTCGTTCATCAAATCCTCGACTCGCGCACT TTTCGGATCCATCAATCGTAAATCTAACCCGCCCCCCACCTGGATAACATTCATTCACGCACACCCTTACACACC CTCTTCTCCAAATTAAATAAATCGCAACAACAGTTCTATGCTCGTTTCAAACAAGGTACGAAAACGCATCTCCAA ACTAAAATATTTTATTAACCTCGTAACTGATTTTGAATCTCAGCGACGATCGGTGATGTGAATATCCCTCGACCT GGTATGCTCGATTTCACCGGTAAAGCCAAGTGGTAAGTTCTTTTGCTCGGTCATTCTTTCTTTGATTGTTTTCTC GCCGAGGATGGAGGATGGAAGATGGTGGGGGAGTGTGGAAGTAAATCTAAAGTATCAGTTTAACTGATCGCTTCC GCGCGCTTCGTTCGTGTACACACCCCTAGCTGACGCTTTTCGGTTCTCTTCTTCCTTCTTTATCTAGGGACGCTT GGAATGAGATTAAAGGTAAATCGAAGGAAGACGCTATGAAAGAATACGTCGAGAAACTTTTGAAGGTACGCGATC TTTACTTCTTTCCGAGTTTTTCCTTTTGTCTGATAACGACCCTTTTTCTAAAATGTAGCTGTTGGAGGGTAACGA CCAAGCCCATTATGATGAACTTAACAATGCTTAA |