Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|080470
Gene name
Location	scaffold_05a:619969..621447
Strand	-
Gene length (bp)	1478
Transcript length (bp)	1125
Coding sequence length (bp)	1125
Protein length (aa)	375

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13668	Ferritin_2	Ferritin-like domain	2.8E-19	55	183

Swissprot hits

Swissprot ID	Swissprot Description	Start	End	E-value
sp\|P53693\|RDS1_SCHPO	Protein rds1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=rds1 PE=2 SV=2	26	374	4.0E-127

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
Yes	1 - 26	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|080470 MITLPVLLVLLSGAHIFGAAKPVMAQENMTEPFKPSGGLGTNSTPPEYVPMSDFDFQSLNLALNQEWIELDLFHH GLAMFSDADFDAAGLGPEDRYLIQFMAEQEVGHATLISNMLQGRGAKPCTYRYPFKTVREFVDFCQKLTRWGESG VYGFLEHLNSRAAATLLLDSITTEARQQLIFRQFEGLFPMDIWFVPGIPQSMAWTLLQPYIATCPAENPRVGFQI FPALNVTNNPDATPLYNTSIVGNDTTPAIARNRTIPLSAPGRTVQLSWEEPGRPAGYNNSYTTNTTAGDPKFALW ISQINSTYTPLENITGNTASTTQPGGMVFGEGTAPIYNGTIFVAITDTDLSVTPFNNSMVNKHVVAGPAIYQAG*
Coding	>Agabi119p4\|080470 ATGATCACTCTCCCGGTGCTCCTCGTTCTACTGTCAGGCGCTCATATCTTCGGCGCGGCCAAGCCAGTAATGGCC CAAGAAAATATGACCGAGCCATTCAAACCGTCGGGTGGATTGGGAACAAATTCTACTCCCCCCGAATATGTCCCT ATGAGCGACTTCGATTTCCAGTCACTGAATCTTGCTCTCAATCAAGAATGGATTGAGCTCGACCTCTTCCATCAT GGCCTCGCCATGTTCTCAGACGCGGATTTTGATGCTGCAGGGCTCGGCCCCGAGGATCGCTATCTGATCCAGTTC ATGGCGGAACAAGAAGTTGGGCACGCGACCCTTATCTCCAATATGTTGCAAGGTCGCGGCGCTAAGCCTTGTACA TATCGGTATCCATTCAAAACTGTCCGAGAGTTCGTTGACTTTTGCCAAAAGCTTACACGTTGGGGCGAATCTGGT GTTTATGGTTTCCTCGAGCACCTGAATTCGCGTGCTGCGGCTACCCTTTTACTGGATTCCATCACTACGGAGGCG CGTCAGCAACTTATTTTCCGTCAATTTGAGGGTTTGTTCCCAATGGATATTTGGTTTGTGCCCGGCATCCCACAG TCAATGGCGTGGACTCTCTTACAACCCTATATTGCCACCTGTCCAGCTGAAAATCCTCGCGTTGGATTCCAAATT TTCCCGGCACTGAATGTCACGAACAACCCCGATGCTACTCCGCTTTACAACACATCCATAGTTGGCAATGACACC ACACCAGCAATCGCACGCAACCGAACAATTCCACTGTCAGCCCCTGGCAGGACAGTTCAACTGAGTTGGGAGGAG CCTGGTAGACCTGCTGGCTATAACAATAGTTATACCACCAACACTACTGCGGGGGATCCAAAGTTTGCGTTATGG ATTTCTCAAATCAACTCCACCTACACGCCACTAGAGAACATTACAGGTAACACGGCTTCTACCACTCAACCAGGA GGTATGGTATTCGGCGAAGGCACTGCGCCCATCTATAATGGTACTATATTCGTCGCTATCACCGACACAGATTTA TCGGTGACTCCATTCAATAATTCGATGGTCAACAAGCATGTTGTCGCAGGTCCGGCCATTTACCAAGCTGGGTAA
Transcript	>Agabi119p4\|080470 ATGATCACTCTCCCGGTGCTCCTCGTTCTACTGTCAGGCGCTCATATCTTCGGCGCGGCCAAGCCAGTAATGGCC CAAGAAAATATGACCGAGCCATTCAAACCGTCGGGTGGATTGGGAACAAATTCTACTCCCCCCGAATATGTCCCT ATGAGCGACTTCGATTTCCAGTCACTGAATCTTGCTCTCAATCAAGAATGGATTGAGCTCGACCTCTTCCATCAT GGCCTCGCCATGTTCTCAGACGCGGATTTTGATGCTGCAGGGCTCGGCCCCGAGGATCGCTATCTGATCCAGTTC ATGGCGGAACAAGAAGTTGGGCACGCGACCCTTATCTCCAATATGTTGCAAGGTCGCGGCGCTAAGCCTTGTACA TATCGGTATCCATTCAAAACTGTCCGAGAGTTCGTTGACTTTTGCCAAAAGCTTACACGTTGGGGCGAATCTGGT GTTTATGGTTTCCTCGAGCACCTGAATTCGCGTGCTGCGGCTACCCTTTTACTGGATTCCATCACTACGGAGGCG CGTCAGCAACTTATTTTCCGTCAATTTGAGGGTTTGTTCCCAATGGATATTTGGTTTGTGCCCGGCATCCCACAG TCAATGGCGTGGACTCTCTTACAACCCTATATTGCCACCTGTCCAGCTGAAAATCCTCGCGTTGGATTCCAAATT TTCCCGGCACTGAATGTCACGAACAACCCCGATGCTACTCCGCTTTACAACACATCCATAGTTGGCAATGACACC ACACCAGCAATCGCACGCAACCGAACAATTCCACTGTCAGCCCCTGGCAGGACAGTTCAACTGAGTTGGGAGGAG CCTGGTAGACCTGCTGGCTATAACAATAGTTATACCACCAACACTACTGCGGGGGATCCAAAGTTTGCGTTATGG ATTTCTCAAATCAACTCCACCTACACGCCACTAGAGAACATTACAGGTAACACGGCTTCTACCACTCAACCAGGA GGTATGGTATTCGGCGAAGGCACTGCGCCCATCTATAATGGTACTATATTCGTCGCTATCACCGACACAGATTTA TCGGTGACTCCATTCAATAATTCGATGGTCAACAAGCATGTTGTCGCAGGTCCGGCCATTTACCAAGCTGGGTAA
Gene	>Agabi119p4\|080470 ATGATCACTCTCCCGGTGCTCCTCGTTCTACTGTCAGGCGCTCATATCTTCGGCGCGGCCAAGCCAGTAATGGCC CAAGAAAATATGACCGAGCCATTCAAACCGTCGGGTGGATTGGGAACAAATTCTACTCCCCCCGAATATGTCCCT ATGAGCGACTTCGATTTCCAGTCACTGGTAAGCCTTTAATCTTTCTGATCAGGCCTCAACTTATGAATTCGGACA GAATCTTGCTCTCAATCAAGAATGGATTGAGCTCGACCTCTTCCATCATGGCCTCGCCATGTTCTCAGACGCGGA TTTTGATGCTGCAGGGCTCGGCCCCGAGGATCGCTATCTGATCCAGTTCATGGCGGAACAAGAAGTTGGGCACGC GACCCTTATCTCCAATATGTTGCAAGGTATATCAGCTGGTATATGACTTATAATCTTATTAATTCCTTGCGCAGG TCGCGGCGCTAAGCCTTGTACATATCGGTATCCATTCAAAACTGTCCGAGAGTTCGTTGACTTTTGCCAAAAGGT GCGCATCACATCCATTGATACTTCACCGTCCCCACTGACATTAAATTAGCTTACACGTTGGGGCGAATCTGGTGT TTATGGTTTCCTCGAGCACCTGAATTCGCGTGCTGCGGCTACCCTTTTACTGGATTCCATCACTACGGAGGCGCG TCAGCAACTTATTTTCCGTCAATTTGAGGGTTTGTTCCCAATGGATGTCAGTGTCCTTCCTCACCCGCGGCCATA TTATGCTAAACTGCTCCATCTAGATTTGGTTTGTGCCCGGCATCCCACAGTCAATGGCGTGGACTCTCTTACAAC CCTATATTGCCACCTGTCCAGCTGAAAATCCTCGCGTTGGATTCCAAATTTTCCCGGCACTGAATGTCACGGTAG GGTATCTTCTCCCCTATACAATTATCCTGCTTAGGTATTCGCGCAGAACAACCCCGATGCTACTCCGCTTTACAA CACATCCATAGTTGGCAATGACACCACACCAGCAATCGCACGCAACCGAACAATTCCACTGTCAGCCCCTGGCAG GACAGTTCAACTGAGTTGGGAGGAGCCTGGTAGACCTGCTGGCTATAACAATAGTTATACCACCAACACTACTGC GGGGGATCCAAAGGTGCGCATTCCATCTCGTACGGCACGTTCATACGTTTAATTTTCCGATAGTTTGCGTTATGG ATTTCTCAAATCAACTCCACCTACACGCCACTAGAGAACATTACAGGTAACACGGCTTCTACCACTCAACCAGGA GGTATGGTATTCGGCGAAGGCACTGCGCCCATCTATAATGGTACTATGTATGTCTTGTCTCAATTCATTATCCTC GATATCATGTCTTACTCCTTTTCAGATTCGTCGCTATCACCGACACAGATTTATCGGTGACTCCATTCAATAATT CGATGGTCAACAAGCATGTTGTCGCAGGTCCGGCCATTTACCAAGCTGGGTAA

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