Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|080160
Gene name
Locationscaffold_05a:524338..525618
Strand+
Gene length (bp)1280
Transcript length (bp)936
Coding sequence length (bp)936
Protein length (aa) 312

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02544 Steroid_dh 3-oxo-5-alpha-steroid 4-dehydrogenase 2.0E-35 155 311

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|O94511|YN67_SCHPO Putative enoyl reductase C646.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC646.07c PE=3 SV=1 4 311 2.0E-72
sp|Q55C17|TECR_DICDI Very-long-chain enoyl-CoA reductase OS=Dictyostelium discoideum GN=gpsn2 PE=3 SV=1 54 311 7.0E-58
sp|Q9N5Y2|TECR_CAEEL Probable very-long-chain enoyl-CoA reductase art-1 OS=Caenorhabditis elegans GN=art-1 PE=3 SV=1 30 311 4.0E-57
sp|Q9NZ01|TECR_HUMAN Very-long-chain enoyl-CoA reductase OS=Homo sapiens GN=TECR PE=1 SV=1 28 311 2.0E-53
sp|Q9M2U2|TECR_ARATH Very-long-chain enoyl-CoA reductase OS=Arabidopsis thaliana GN=ECR PE=1 SV=1 23 308 3.0E-53
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Swissprot ID Swissprot Description Start End E-value
sp|O94511|YN67_SCHPO Putative enoyl reductase C646.07c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC646.07c PE=3 SV=1 4 311 2.0E-72
sp|Q55C17|TECR_DICDI Very-long-chain enoyl-CoA reductase OS=Dictyostelium discoideum GN=gpsn2 PE=3 SV=1 54 311 7.0E-58
sp|Q9N5Y2|TECR_CAEEL Probable very-long-chain enoyl-CoA reductase art-1 OS=Caenorhabditis elegans GN=art-1 PE=3 SV=1 30 311 4.0E-57
sp|Q9NZ01|TECR_HUMAN Very-long-chain enoyl-CoA reductase OS=Homo sapiens GN=TECR PE=1 SV=1 28 311 2.0E-53
sp|Q9M2U2|TECR_ARATH Very-long-chain enoyl-CoA reductase OS=Arabidopsis thaliana GN=ECR PE=1 SV=1 23 308 3.0E-53
sp|Q3ZCD7|TECR_BOVIN Very-long-chain enoyl-CoA reductase OS=Bos taurus GN=TECR PE=2 SV=1 26 311 5.0E-53
sp|Q64232|TECR_RAT Very-long-chain enoyl-CoA reductase OS=Rattus norvegicus GN=Tecr PE=1 SV=1 26 311 1.0E-52
sp|Q9CY27|TECR_MOUSE Very-long-chain enoyl-CoA reductase OS=Mus musculus GN=Tecr PE=1 SV=1 26 311 5.0E-52
sp|Q99190|TECR_YEAST Very-long-chain enoyl-CoA reductase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TSC13 PE=1 SV=1 22 311 7.0E-39
sp|Q5HYJ1|TECRL_HUMAN Trans-2,3-enoyl-CoA reductase-like OS=Homo sapiens GN=TECRL PE=2 SV=1 14 311 1.0E-33
sp|Q8BFZ1|TECRL_MOUSE Trans-2,3-enoyl-CoA reductase-like OS=Mus musculus GN=Tecrl PE=1 SV=1 24 311 2.0E-33
sp|Q3SZ89|TECRL_BOVIN Trans-2,3-enoyl-CoA reductase-like OS=Bos taurus GN=TECRL PE=2 SV=1 14 311 1.0E-29
sp|Q8AVI9|PORED_XENLA Polyprenol reductase OS=Xenopus laevis GN=srd5a3 PE=2 SV=1 131 310 1.0E-11
sp|A5PJS2|S5A1_BOVIN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Bos taurus GN=SRD5A1 PE=2 SV=1 132 311 4.0E-11
sp|P18405|S5A1_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Homo sapiens GN=SRD5A1 PE=1 SV=1 132 310 6.0E-10
sp|Q0P4J9|PORED_XENTR Polyprenol reductase OS=Xenopus tropicalis GN=srd5a3 PE=2 SV=1 132 310 1.0E-09
sp|Q68FF9|S5A1_MOUSE 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Mus musculus GN=Srd5a1 PE=2 SV=2 127 311 2.0E-09
sp|P24008|S5A1_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Rattus norvegicus GN=Srd5a1 PE=1 SV=2 86 311 2.0E-09
sp|P31214|S5A2_RAT 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Rattus norvegicus GN=Srd5a2 PE=1 SV=1 217 310 2.0E-09
sp|Q28892|S5A2_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Macaca fascicularis GN=SRD5A2 PE=1 SV=1 217 310 6.0E-09
sp|Q28891|S5A1_MACFA 3-oxo-5-alpha-steroid 4-dehydrogenase 1 OS=Macaca fascicularis GN=SRD5A1 PE=1 SV=1 194 310 7.0E-09
sp|Q2QDF6|DET2_GOSHI Steroid 5-alpha-reductase DET2 OS=Gossypium hirsutum GN=DET2 PE=1 SV=1 194 310 9.0E-09
sp|Q99N99|S5A2_MOUSE 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Mus musculus GN=Srd5a2 PE=2 SV=1 217 310 1.0E-08
sp|P31213|S5A2_HUMAN 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Homo sapiens GN=SRD5A2 PE=1 SV=1 217 310 2.0E-08
sp|Q5K2N1|DET2_SOLLC Steroid 5-alpha-reductase DET2 OS=Solanum lycopersicum GN=DET2 PE=1 SV=1 215 310 3.0E-08
sp|O18765|S5A2_PIG 3-oxo-5-alpha-steroid 4-dehydrogenase 2 OS=Sus scrofa GN=SRD5A2 PE=2 SV=2 217 310 4.0E-08
sp|Q38944|DET2_ARATH Steroid 5-alpha-reductase DET2 OS=Arabidopsis thaliana GN=DET2 PE=1 SV=2 217 310 1.0E-07
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GO

GO Term Description Terminal node
GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors Yes
GO:0006629 lipid metabolic process Yes
GO:0016491 oxidoreductase activity No
GO:0003824 catalytic activity No
GO:0071704 organic substance metabolic process No
GO:0044238 primary metabolic process No
GO:0008150 biological_process No
GO:0008152 metabolic process No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 17 0.45

Transmembrane Domains

Domain # Start End Length
1 258 280 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|080160
MVNISISAASRPPQFAKNWPIQIDIPQHGTIADVKKAIFLKYPKFYASRQKVTLKDDRKPLADDQELASVLGSKF
EGSELQVKDLGPQIGWRTVFFIEYVGPLLIHPLFYYFPKVWYGKAVEHSMLQKYVYAMVMLHFVKRELETLFVHR
FSNGTMPFMNVFKNSGHYHILSGLLLACDIYRPKYSATSPSILDTYRNNKDFLYIAAGLWAFAELSNFHTHMTLR
GLRPPGTRTRAIPYGYGFSLVSCPNYFFEVMGWVVIAVMTNSIAAYIFVAFSAYIMTVWAVKKHRNYRKEFGKEY
PRRNAIWPFVL*
Coding >Agabi119p4|080160
ATGGTCAACATCAGCATTTCTGCAGCCTCGAGGCCACCTCAATTTGCCAAGAACTGGCCTATACAGATTGATATA
CCCCAACATGGAACCATTGCCGACGTGAAAAAGGCTATTTTCCTCAAATACCCAAAGTTCTACGCCTCGAGACAA
AAGGTTACTCTGAAGGATGATAGGAAACCCTTGGCGGATGATCAGGAGTTGGCTTCTGTGCTTGGAAGCAAGTTT
GAGGGATCTGAATTGCAGGTCAAGGATTTGGGTCCTCAGATTGGCTGGAGGACCGTGTTTTTCATTGAATACGTT
GGGCCACTCCTTATTCACCCACTTTTCTATTACTTCCCGAAAGTGTGGTATGGGAAAGCTGTGGAGCATAGCATG
CTGCAGAAATATGTGTATGCGATGGTGATGCTACATTTCGTCAAGCGGGAGCTCGAAACTTTGTTTGTTCACCGG
TTTTCAAATGGCACCATGCCGTTTATGAATGTTTTCAAAAATTCTGGCCATTATCATATTTTGAGTGGACTGCTA
CTCGCGTGTGACATATATCGTCCGAAATACTCGGCCACTTCGCCTTCTATACTGGATACCTACCGGAACAACAAA
GATTTCTTATATATCGCTGCTGGACTATGGGCTTTTGCTGAACTCTCTAATTTTCATACTCACATGACTTTGCGA
GGCCTTCGTCCTCCTGGCACTCGAACTCGTGCCATTCCTTATGGATATGGATTTTCTTTGGTCTCTTGTCCAAAT
TACTTCTTCGAAGTGATGGGCTGGGTGGTTATCGCCGTAATGACAAATAGTATCGCAGCATACATATTTGTCGCG
TTTTCAGCGTATATTATGACGGTGTGGGCAGTGAAGAAACACAGGAACTACAGAAAGGAGTTTGGGAAGGAGTAT
CCGCGCCGGAATGCGATCTGGCCGTTTGTGTTGTAG
Transcript >Agabi119p4|080160
ATGGTCAACATCAGCATTTCTGCAGCCTCGAGGCCACCTCAATTTGCCAAGAACTGGCCTATACAGATTGATATA
CCCCAACATGGAACCATTGCCGACGTGAAAAAGGCTATTTTCCTCAAATACCCAAAGTTCTACGCCTCGAGACAA
AAGGTTACTCTGAAGGATGATAGGAAACCCTTGGCGGATGATCAGGAGTTGGCTTCTGTGCTTGGAAGCAAGTTT
GAGGGATCTGAATTGCAGGTCAAGGATTTGGGTCCTCAGATTGGCTGGAGGACCGTGTTTTTCATTGAATACGTT
GGGCCACTCCTTATTCACCCACTTTTCTATTACTTCCCGAAAGTGTGGTATGGGAAAGCTGTGGAGCATAGCATG
CTGCAGAAATATGTGTATGCGATGGTGATGCTACATTTCGTCAAGCGGGAGCTCGAAACTTTGTTTGTTCACCGG
TTTTCAAATGGCACCATGCCGTTTATGAATGTTTTCAAAAATTCTGGCCATTATCATATTTTGAGTGGACTGCTA
CTCGCGTGTGACATATATCGTCCGAAATACTCGGCCACTTCGCCTTCTATACTGGATACCTACCGGAACAACAAA
GATTTCTTATATATCGCTGCTGGACTATGGGCTTTTGCTGAACTCTCTAATTTTCATACTCACATGACTTTGCGA
GGCCTTCGTCCTCCTGGCACTCGAACTCGTGCCATTCCTTATGGATATGGATTTTCTTTGGTCTCTTGTCCAAAT
TACTTCTTCGAAGTGATGGGCTGGGTGGTTATCGCCGTAATGACAAATAGTATCGCAGCATACATATTTGTCGCG
TTTTCAGCGTATATTATGACGGTGTGGGCAGTGAAGAAACACAGGAACTACAGAAAGGAGTTTGGGAAGGAGTAT
CCGCGCCGGAATGCGATCTGGCCGTTTGTGTTGTAG
Gene >Agabi119p4|080160
ATGGTCAACATCAGCATTTCTGCAGCCTCGAGGCCACCTCAATTTGCCAAGAACTGGCCTATACAGATTGATATA
CCCCAACATGGAACCATTGCCGACGTGAAAAAGGCTATTTTCCTCAAATACCCAAAGGTATGAGCGTCATCCTCT
GAAAATTAAACTGCGTTTTAATAGAGCTACTTCTTTTCTAGTTCTACGCCTCGAGACAAAAGGTTACTCTGAAGG
ATGATAGGAAACCCTTGGCGGATGATCAGGAGTTGGCTTCTGTGCTTGGAAGCAAGTTTGAGGGATCTGAATTGC
AGGTCAAGGATTTGGGTCCTCAGATTGGCTGGAGGACCGTGTTTTTCATTGAATACGTGTGTTATTCAGCCTTCC
CTCTCCCGGATAGGTGGTATATTGACGCGGGATTATTTCAGGTTGGGCCACTCCTTATTCACCCACTTTTCTATT
ACTTCCCGAAAGTGTGGTATGGGAAAGCTGTGGAGCATAGCATGCTGCAGAAATATGTGTATGCGATGGTGATGC
TACATTTCGTCAAGCGGGAGCTCGAAACTTTGTTGTAAGTCGTTCTGACTCATTACTCGAAAAGTTGACGCGTGT
ATAACCTCTTTGCCCCGACAGTGTTCACCGGTTTTCAAATGGCACCATGCCGTTTATGAATGTTTTCAAAAAGTG
GGCTTTCAGTATTCTTTGTATTTCCGAGTACTCATTCGATTGCGGTTGTGATTCAGTTCTGGCCATTATCATATT
TTGAGTGGACTGCTACTCGCGTGTGACATATATCGTCCGAAATACTCGGCCACTTCGCCTTCTATACTGGATACC
TACCGGAACAACAAAGATTTCTTATATATCGCTGCTGGACTATGGGCTGTGGGTATCTGACGTTATTTCATCCAC
ATGTCATTGACTCTTTCAACAGTTTGCTGAACTCTCTAATTTTCATACTCACATGACTTTGCGAGGCCTTCGTCC
TCCTGGCACTCGAACTCGTGCCATTCCTTATGGATATGGATTTTCTTTGGTCTCTTGTCCAAATTACTTCTTCGA
AGTGATGGGCTGGGTGGTTATCGCCGTAATGACAAATAGTATCGCAGGTAAAATTTTTTTGCATCTTACGATACG
GCGTTATTAATGCTGATCCCTTTATAGCATACATATTTGTCGCGTTTTCAGCGTATATTATGACGGTGTGGGCAG
TGAAGAAACACAGGAACTACAGAAAGGAGTTTGGGAAGGAGTATCCGCGCCGGAATGCGATCTGGCCGTTTGTGT
TGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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