Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|079330
Gene name
Locationscaffold_05a:239604..240079
Strand+
Gene length (bp)475
Transcript length (bp)345
Coding sequence length (bp)345
Protein length (aa) 115

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PFAM Domains

(None)

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 30 0.45

Transmembrane Domains

Domain # Start End Length
1 7 29 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|079330
MGILTKTISSLSFFFVALILPGFIAQASPIQPLIQVESGALGSASHASAMPAAEVNAGAQPRQVLAGLTFIPALE
SDLGLVPASDGWYVKHHLQAYHRYVDSLSYRKINEYLQT*
Coding >Agabi119p4|079330
ATGGGCATCCTCACTAAGACGATTTCCTCTCTATCATTCTTCTTCGTGGCTCTCATTCTTCCTGGATTCATCGCG
CAAGCGAGCCCAATTCAACCACTTATTCAAGTGGAAAGCGGAGCTCTTGGATCTGCCAGTCATGCCTCAGCAATG
CCGGCGGCTGAAGTGAACGCAGGCGCGCAACCCCGCCAAGTTCTCGCTGGATTGACTTTCATTCCTGCTTTGGAG
TCAGATTTGGGACTCGTCCCAGCTAGTGACGGGTGGTACGTTAAACACCATTTACAAGCATATCACAGATATGTC
GACTCACTATCATATCGAAAGATAAATGAATACTTGCAAACTTAG
Transcript >Agabi119p4|079330
ATGGGCATCCTCACTAAGACGATTTCCTCTCTATCATTCTTCTTCGTGGCTCTCATTCTTCCTGGATTCATCGCG
CAAGCGAGCCCAATTCAACCACTTATTCAAGTGGAAAGCGGAGCTCTTGGATCTGCCAGTCATGCCTCAGCAATG
CCGGCGGCTGAAGTGAACGCAGGCGCGCAACCCCGCCAAGTTCTCGCTGGATTGACTTTCATTCCTGCTTTGGAG
TCAGATTTGGGACTCGTCCCAGCTAGTGACGGGTGGTACGTTAAACACCATTTACAAGCATATCACAGATATGTC
GACTCACTATCATATCGAAAGATAAATGAATACTTGCAAACTTAG
Gene >Agabi119p4|079330
ATGGGCATCCTCACTAAGACGATTTCCTCTCTATCATTCTTCTTCGTGGCTCTCATTCTTCCTGGATTCATCGCG
CAAGCGAGCCCAATTCAACCACTTGTATGTAATCTTCTCAGCTCAAACATACCTTAGTTGCATCTTGATGGTCAC
CTCGTTCAGATTCAAGTGGAAAGCGGAGCTCTTGGATCTGCCAGTCATGCCTCAGCAATGCCGGCGGCTGAAGTG
AACGCAGGCGCGCAACCCCGCCAAGTTGTGAGTGTTGCAACTTAACCTTTATTTGGAAATCGACGGTAGATTAGA
CCGTTGATCGCTCTTTTATTAGCTCGCTGGATTGACTTTCATTCCTGCTTTGGAGTCAGATTTGGGACTCGTCCC
AGCTAGTGACGGGTGGTACGTTAAACACCATTTACAAGCATATCACAGATATGTCGACTCACTATCATATCGAAA
GATAAATGAATACTTGCAAACTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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