Fungal Genomics

General Properties

Protein ID	Agabi119p4|079060
Gene name
Location	scaffold_05a:178198..179387
Strand	-
Gene length (bp)	1189
Transcript length (bp)	1140
Coding sequence length (bp)	1140
Protein length (aa)	380

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00646	F-box	F-box domain	1.2E-03	6	41
PF12937	F-box-like	F-box-like	1.6E-05	4	45

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	5466
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|079060
Agaricus bisporus var bisporus H97	AgabiH97|079060
Agaricus bisporus var burnettii H119p4	Agabi119p4|079060 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|079060 MHHIQALPLELLGLIIESLSHERDALLQASLTCKVWRSICYRHLFSSVILNSRSLPPFFELLENQFTRTTIPLCV RRLSIDFPAPTATTYFGWRECLTKILMHLSHVDRVAHLKLSNMCTTDGVLSSVLSSAFTNTNSLDLSNSTFGDPM ALGHFLGAYPHLKQVVLRDVLCPIPYSASLSPLPPVGAYGLQISASVDFGFHASLKWCRTSEAKNLQQLGAVSFI HPGNIHHVLNILAPFLNFLELMHPAQNVESQNSLPYEINLHNATHLRFLSLGFPDRVLGVMPWILRILHYLQGNS LRGLRLSFSASQQFTLDIPFLKLLRQTLEKSQFRMLQSLQFFTFNTFGDEDVAKLVVKHVSESLDSWHEQGKLRF AFPP*
Coding	>Agabi119p4|079060 ATGCACCATATTCAGGCGCTTCCACTCGAACTTCTGGGCCTCATTATTGAGTCCTTGTCACACGAGAGGGATGCG CTCCTTCAGGCCAGCTTGACGTGTAAAGTCTGGCGTTCTATCTGCTACCGCCACTTGTTTTCATCTGTCATTTTG AACTCGCGGTCTTTACCGCCTTTCTTTGAGCTCTTGGAGAATCAATTCACACGTACTACTATCCCTTTATGCGTT CGCCGATTGTCCATCGACTTCCCAGCCCCAACCGCCACTACATACTTTGGTTGGCGCGAGTGCTTGACCAAAATA CTGATGCACTTGTCCCATGTCGATCGCGTTGCGCATCTCAAGCTCTCGAATATGTGTACAACAGACGGCGTACTG TCCTCTGTGCTGTCTTCTGCTTTTACCAATACCAACTCGCTCGATCTTTCCAATTCTACCTTCGGTGATCCTATG GCACTAGGGCACTTTCTCGGTGCTTATCCTCATCTCAAACAAGTCGTATTGAGGGATGTTCTCTGCCCAATCCCT TACTCAGCGTCCCTCTCCCCTCTACCCCCGGTAGGCGCTTATGGACTACAAATCTCGGCGTCCGTTGATTTCGGG TTCCATGCGAGCCTAAAATGGTGTCGAACCTCAGAGGCTAAGAACTTACAACAATTGGGTGCTGTATCTTTCATA CACCCGGGCAACATTCATCACGTATTGAATATCCTTGCTCCTTTCTTAAACTTCTTGGAGTTAATGCACCCAGCA CAAAATGTGGAATCGCAAAACTCCCTCCCGTATGAAATAAATCTTCATAATGCTACACATCTTCGATTCCTTAGT CTGGGCTTCCCAGATCGTGTCCTCGGTGTCATGCCATGGATTCTTCGCATATTACATTATCTTCAAGGAAATTCG CTACGTGGGTTACGGTTATCTTTTTCCGCTTCCCAACAATTCACCCTCGACATACCCTTTCTCAAACTTCTCCGC CAAACATTGGAAAAGTCTCAATTCCGAATGTTGCAAAGTCTCCAGTTCTTCACCTTCAATACGTTCGGCGATGAA GATGTTGCCAAGCTTGTTGTCAAGCACGTGAGCGAGTCGCTGGACAGTTGGCACGAGCAAGGCAAATTGAGATTT GCCTTTCCGCCATGA
Transcript	>Agabi119p4|079060 ATGCACCATATTCAGGCGCTTCCACTCGAACTTCTGGGCCTCATTATTGAGTCCTTGTCACACGAGAGGGATGCG CTCCTTCAGGCCAGCTTGACGTGTAAAGTCTGGCGTTCTATCTGCTACCGCCACTTGTTTTCATCTGTCATTTTG AACTCGCGGTCTTTACCGCCTTTCTTTGAGCTCTTGGAGAATCAATTCACACGTACTACTATCCCTTTATGCGTT CGCCGATTGTCCATCGACTTCCCAGCCCCAACCGCCACTACATACTTTGGTTGGCGCGAGTGCTTGACCAAAATA CTGATGCACTTGTCCCATGTCGATCGCGTTGCGCATCTCAAGCTCTCGAATATGTGTACAACAGACGGCGTACTG TCCTCTGTGCTGTCTTCTGCTTTTACCAATACCAACTCGCTCGATCTTTCCAATTCTACCTTCGGTGATCCTATG GCACTAGGGCACTTTCTCGGTGCTTATCCTCATCTCAAACAAGTCGTATTGAGGGATGTTCTCTGCCCAATCCCT TACTCAGCGTCCCTCTCCCCTCTACCCCCGGTAGGCGCTTATGGACTACAAATCTCGGCGTCCGTTGATTTCGGG TTCCATGCGAGCCTAAAATGGTGTCGAACCTCAGAGGCTAAGAACTTACAACAATTGGGTGCTGTATCTTTCATA CACCCGGGCAACATTCATCACGTATTGAATATCCTTGCTCCTTTCTTAAACTTCTTGGAGTTAATGCACCCAGCA CAAAATGTGGAATCGCAAAACTCCCTCCCGTATGAAATAAATCTTCATAATGCTACACATCTTCGATTCCTTAGT CTGGGCTTCCCAGATCGTGTCCTCGGTGTCATGCCATGGATTCTTCGCATATTACATTATCTTCAAGGAAATTCG CTACGTGGGTTACGGTTATCTTTTTCCGCTTCCCAACAATTCACCCTCGACATACCCTTTCTCAAACTTCTCCGC CAAACATTGGAAAAGTCTCAATTCCGAATGTTGCAAAGTCTCCAGTTCTTCACCTTCAATACGTTCGGCGATGAA GATGTTGCCAAGCTTGTTGTCAAGCACGTGAGCGAGTCGCTGGACAGTTGGCACGAGCAAGGCAAATTGAGATTT GCCTTTCCGCCATGA
Gene	>Agabi119p4|079060 ATGCACCATATTCAGGCGCTTCCACTCGAACTTCTGGGCCTCATTATTGAGTCCTTGTCACACGAGAGGGATGCG CTCCTTCAGGCCAGCTTGACGTGTAAAGTCTGGCGTTCTATCTGCTACCGCCACTTGTTTTCATCTGTCATTTTG AACTCGCGGTCTTTACCGCCTTTCTTTGAGCTCTTGGAGAATCAATTCACACGTACTACTATCCCTTTATGCGTT CGCCGATTGTCCATCGACTTCCCAGCCCCAACCGCCACTACATACTTTGGTTGGCGCGAGTGCTTGACCAAAATA CTGATGCACTTGTCCCATGTCGATCGCGTTGCGCATCTCAAGCTCTCGAATATGTGTACAACAGACGGCGTACTG TCCTCTGTGCTGTCTTCTGCTTTTACCAATACCAACTCGCTCGATCTTTCCAATTCTACCTTCGGTGATCCTATG GCACTAGGGCACTTTCTCGGTGCTTATCCTCATCTCAAACAAGTCGTATTGAGGGATGTTCTCTGCCCAATCCCT TACTCAGCGTCCCTCTCCCCTCTACCCCCGGTAGGCGCTTATGGACTACAAATCTCGGCGTCCGTTGATTTCGGG TTCCATGCGAGCCTAAAATGGTGTCGAACCTCAGAGGCTAAGAACTTACAACAATTGGGTGCTGTATCTTTCATA CACCCGGGCAACATTCATCACGTATTGAATATCCTTGCTCCTTTCTTAAACTTCTTGGAGTTAATGCACCCAGCA CAAAGTGCGTGATCTCCTCCAAATTCAGCTTACAAGCAAATGACAATTGACAGATGTGGAATCGCAAAACTCCCT CCCGTATGAAATAAATCTTCATAATGCTACACATCTTCGATTCCTTAGTCTGGGCTTCCCAGATCGTGTCCTCGG TGTCATGCCATGGATTCTTCGCATATTACATTATCTTCAAGGAAATTCGCTACGTGGGTTACGGTTATCTTTTTC CGCTTCCCAACAATTCACCCTCGACATACCCTTTCTCAAACTTCTCCGCCAAACATTGGAAAAGTCTCAATTCCG AATGTTGCAAAGTCTCCAGTTCTTCACCTTCAATACGTTCGGCGATGAAGATGTTGCCAAGCTTGTTGTCAAGCA CGTGAGCGAGTCGCTGGACAGTTGGCACGAGCAAGGCAAATTGAGATTTGCCTTTCCGCCATGA