Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|077040
Gene name
Locationscaffold_04:2625022..2627171
Strand+
Gene length (bp)2149
Transcript length (bp)1641
Coding sequence length (bp)1641
Protein length (aa) 547

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12999 PRKCSH-like Glucosidase II beta subunit-like 1.1E-45 8 174
PF13015 PRKCSH_1 Glucosidase II beta subunit-like protein 1.7E-22 390 533
PF07915 PRKCSH Glucosidase II beta subunit-like protein 1.1E-07 426 489

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P0CT24|GLU2B_USTMA Glucosidase 2 subunit beta OS=Ustilago maydis (strain 521 / FGSC 9021) GN=UMAG_12045 PE=3 SV=1 30 532 3.0E-99
sp|Q9USH8|GLU2B_SCHPO Glucosidase 2 subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gtb1 PE=1 SV=1 8 532 6.0E-42
sp|P14314|GLU2B_HUMAN Glucosidase 2 subunit beta OS=Homo sapiens GN=PRKCSH PE=1 SV=2 40 187 2.0E-25
sp|Q9FM96|PSL4_ARATH Glucosidase 2 subunit beta OS=Arabidopsis thaliana GN=PSL4 PE=2 SV=1 20 187 5.0E-25
sp|A2WNF5|GLU2B_ORYSI Glucosidase 2 subunit beta OS=Oryza sativa subsp. indica GN=OsI_01383 PE=3 SV=1 22 154 4.0E-24
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Swissprot ID Swissprot Description Start End E-value
sp|P0CT24|GLU2B_USTMA Glucosidase 2 subunit beta OS=Ustilago maydis (strain 521 / FGSC 9021) GN=UMAG_12045 PE=3 SV=1 30 532 3.0E-99
sp|Q9USH8|GLU2B_SCHPO Glucosidase 2 subunit beta OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gtb1 PE=1 SV=1 8 532 6.0E-42
sp|P14314|GLU2B_HUMAN Glucosidase 2 subunit beta OS=Homo sapiens GN=PRKCSH PE=1 SV=2 40 187 2.0E-25
sp|Q9FM96|PSL4_ARATH Glucosidase 2 subunit beta OS=Arabidopsis thaliana GN=PSL4 PE=2 SV=1 20 187 5.0E-25
sp|A2WNF5|GLU2B_ORYSI Glucosidase 2 subunit beta OS=Oryza sativa subsp. indica GN=OsI_01383 PE=3 SV=1 22 154 4.0E-24
sp|Q5NBP9|GLU2B_ORYSJ Glucosidase 2 subunit beta OS=Oryza sativa subsp. japonica GN=Os01g0276800 PE=2 SV=1 22 154 4.0E-24
sp|O08795|GLU2B_MOUSE Glucosidase 2 subunit beta OS=Mus musculus GN=Prkcsh PE=1 SV=1 40 237 3.0E-23
sp|Q28034|GLU2B_BOVIN Glucosidase 2 subunit beta OS=Bos taurus GN=PRKCSH PE=2 SV=1 40 181 3.0E-22
sp|Q28034|GLU2B_BOVIN Glucosidase 2 subunit beta OS=Bos taurus GN=PRKCSH PE=2 SV=1 377 520 2.0E-16
sp|P14314|GLU2B_HUMAN Glucosidase 2 subunit beta OS=Homo sapiens GN=PRKCSH PE=1 SV=2 377 520 4.0E-16
sp|Q5NBP9|GLU2B_ORYSJ Glucosidase 2 subunit beta OS=Oryza sativa subsp. japonica GN=Os01g0276800 PE=2 SV=1 375 530 4.0E-15
sp|A2WNF5|GLU2B_ORYSI Glucosidase 2 subunit beta OS=Oryza sativa subsp. indica GN=OsI_01383 PE=3 SV=1 375 530 5.0E-15
sp|Q04924|GLU2B_YEAST Glucosidase 2 subunit beta OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GTB1 PE=1 SV=1 1 259 5.0E-15
sp|Q9FM96|PSL4_ARATH Glucosidase 2 subunit beta OS=Arabidopsis thaliana GN=PSL4 PE=2 SV=1 356 531 6.0E-13
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|077040
MLAYFLLLLPLSTQVAGALDKTFGVAPDLVSKYVPTNGKWKCLDGSKEIPWELVNDDSCDCADGSDEPGTGACPD
TFFYCHNKGHIGASIPSSRVRDGICEPQCCDGSDERPGVCKNVCEEVGEAHQKKNAAEMKLRKTGSKIRSTYIAF
AHKEKKRLEERTAALEKEIQAKEIEVQQLKNTAERTESFDAAVLEHKKQSPLYLNVIDHHNALEYLQSEVERYRK
AEKKLGEILDTLRRGYNPNYQDMAVLEAVRGWEKHADLPHINDVGKEGEAAEEEKKEKPPAATTVDGEVWTEEML
QKELKALIKTDFDSLLVEDDEYHRSNEVQEENQFDVTSYLPDFAVGYYDQLKDGLVSLFGSAPEASTKDSTKGSA
KATKAREAFNKADQELRQLQTDKQQSEREAAKIFDVKHFGAEGAWKKLDNTCIEYDDGDYIYETCFFKESKQKPK
GSGITQSLGNFESWNPSPDVEPGTPEYYSKQVYKHGSRCWNGPERNVIFILTCGTENTITSVQELEKCEYQFTGT
TPALCLPVTESNTNNKSRQEL*
Coding >Agabi119p4|077040
ATGTTGGCGTATTTTCTCTTGCTTCTTCCTCTTTCCACACAAGTTGCCGGCGCTTTGGACAAAACCTTTGGTGTC
GCACCGGACCTGGTATCTAAATATGTACCAACGAATGGGAAATGGAAGTGTCTGGATGGGTCAAAGGAAATTCCT
TGGGAACTCGTGAACGACGATTCCTGTGATTGCGCAGATGGGAGTGATGAGCCTGGAACTGGCGCATGTCCTGAT
ACGTTTTTCTATTGTCACAACAAGGGACACATAGGAGCCTCCATTCCCAGCTCCAGAGTACGCGATGGAATTTGT
GAGCCACAATGCTGTGATGGTTCAGATGAGCGTCCCGGAGTTTGTAAGAATGTGTGTGAGGAGGTTGGTGAAGCG
CACCAGAAGAAGAATGCGGCTGAGATGAAACTTCGGAAGACGGGGTCTAAAATTCGTTCAACTTATATTGCCTTC
GCACACAAAGAGAAGAAGCGCTTAGAGGAGCGAACCGCAGCCCTCGAGAAGGAAATTCAGGCCAAGGAAATAGAG
GTTCAACAATTGAAAAATACTGCTGAACGTACGGAATCTTTTGATGCTGCTGTTCTCGAACACAAGAAACAATCT
CCGCTTTACTTAAACGTCATCGATCATCATAACGCGCTTGAGTATCTCCAGAGCGAGGTTGAAAGGTATCGTAAA
GCTGAAAAGAAACTTGGAGAAATTCTCGACACTCTCAGACGCGGTTACAACCCGAACTATCAAGACATGGCCGTC
CTAGAGGCAGTTCGTGGTTGGGAGAAACATGCTGATCTTCCCCACATTAACGACGTTGGCAAAGAGGGTGAAGCA
GCTGAGGAAGAGAAGAAAGAAAAACCGCCTGCTGCAACGACGGTCGATGGAGAAGTGTGGACTGAGGAGATGCTG
CAAAAGGAGTTGAAGGCGTTAATAAAAACTGATTTTGACTCGTTGCTAGTGGAAGACGACGAGTACCATCGCTCG
AATGAAGTACAAGAAGAGAATCAGTTCGATGTTACATCATACCTTCCCGATTTTGCGGTTGGCTACTATGATCAG
CTCAAAGACGGTCTTGTCTCGTTGTTCGGCAGTGCACCAGAAGCCTCCACAAAGGACTCCACAAAGGGCTCAGCC
AAGGCAACCAAGGCCCGTGAAGCGTTCAACAAGGCTGATCAGGAGCTACGTCAACTCCAAACAGACAAGCAACAG
AGTGAACGGGAGGCTGCTAAAATCTTCGACGTAAAGCACTTCGGTGCCGAGGGCGCATGGAAGAAACTTGATAAT
ACCTGCATTGAATATGATGACGGAGACTACATCTACGAAACCTGTTTCTTCAAGGAATCCAAGCAAAAACCAAAG
GGCTCAGGAATCACTCAAAGTCTTGGTAACTTTGAATCGTGGAATCCATCACCGGATGTTGAACCCGGAACACCC
GAATATTACTCGAAACAGGTATACAAGCATGGTTCGAGATGTTGGAACGGTCCAGAACGCAATGTTATCTTTATC
CTGACTTGTGGGACTGAGAATACTATTACATCGGTGCAGGAACTTGAAAAATGTGAATATCAGTTCACAGGGACA
ACACCAGCACTTTGTTTACCAGTGACGGAGTCTAATACCAATAATAAGTCGAGGCAAGAGCTTTAG
Transcript >Agabi119p4|077040
ATGTTGGCGTATTTTCTCTTGCTTCTTCCTCTTTCCACACAAGTTGCCGGCGCTTTGGACAAAACCTTTGGTGTC
GCACCGGACCTGGTATCTAAATATGTACCAACGAATGGGAAATGGAAGTGTCTGGATGGGTCAAAGGAAATTCCT
TGGGAACTCGTGAACGACGATTCCTGTGATTGCGCAGATGGGAGTGATGAGCCTGGAACTGGCGCATGTCCTGAT
ACGTTTTTCTATTGTCACAACAAGGGACACATAGGAGCCTCCATTCCCAGCTCCAGAGTACGCGATGGAATTTGT
GAGCCACAATGCTGTGATGGTTCAGATGAGCGTCCCGGAGTTTGTAAGAATGTGTGTGAGGAGGTTGGTGAAGCG
CACCAGAAGAAGAATGCGGCTGAGATGAAACTTCGGAAGACGGGGTCTAAAATTCGTTCAACTTATATTGCCTTC
GCACACAAAGAGAAGAAGCGCTTAGAGGAGCGAACCGCAGCCCTCGAGAAGGAAATTCAGGCCAAGGAAATAGAG
GTTCAACAATTGAAAAATACTGCTGAACGTACGGAATCTTTTGATGCTGCTGTTCTCGAACACAAGAAACAATCT
CCGCTTTACTTAAACGTCATCGATCATCATAACGCGCTTGAGTATCTCCAGAGCGAGGTTGAAAGGTATCGTAAA
GCTGAAAAGAAACTTGGAGAAATTCTCGACACTCTCAGACGCGGTTACAACCCGAACTATCAAGACATGGCCGTC
CTAGAGGCAGTTCGTGGTTGGGAGAAACATGCTGATCTTCCCCACATTAACGACGTTGGCAAAGAGGGTGAAGCA
GCTGAGGAAGAGAAGAAAGAAAAACCGCCTGCTGCAACGACGGTCGATGGAGAAGTGTGGACTGAGGAGATGCTG
CAAAAGGAGTTGAAGGCGTTAATAAAAACTGATTTTGACTCGTTGCTAGTGGAAGACGACGAGTACCATCGCTCG
AATGAAGTACAAGAAGAGAATCAGTTCGATGTTACATCATACCTTCCCGATTTTGCGGTTGGCTACTATGATCAG
CTCAAAGACGGTCTTGTCTCGTTGTTCGGCAGTGCACCAGAAGCCTCCACAAAGGACTCCACAAAGGGCTCAGCC
AAGGCAACCAAGGCCCGTGAAGCGTTCAACAAGGCTGATCAGGAGCTACGTCAACTCCAAACAGACAAGCAACAG
AGTGAACGGGAGGCTGCTAAAATCTTCGACGTAAAGCACTTCGGTGCCGAGGGCGCATGGAAGAAACTTGATAAT
ACCTGCATTGAATATGATGACGGAGACTACATCTACGAAACCTGTTTCTTCAAGGAATCCAAGCAAAAACCAAAG
GGCTCAGGAATCACTCAAAGTCTTGGTAACTTTGAATCGTGGAATCCATCACCGGATGTTGAACCCGGAACACCC
GAATATTACTCGAAACAGGTATACAAGCATGGTTCGAGATGTTGGAACGGTCCAGAACGCAATGTTATCTTTATC
CTGACTTGTGGGACTGAGAATACTATTACATCGGTGCAGGAACTTGAAAAATGTGAATATCAGTTCACAGGGACA
ACACCAGCACTTTGTTTACCAGTGACGGAGTCTAATACCAATAATAAGTCGAGGCAAGAGCTTTAG
Gene >Agabi119p4|077040
ATGTTGGCGTATTTTCTCTTGCTTCTTCCTCTTTCCACACAAGTTGCCGGCGCTTTGGACAAAACCTTTGGTGTC
GCACCGGACCTGGTATCTAAATATGTACCAACGAATGGGAAATGGAAGTGTCTGGATGGGTCAAAGGAAATTCCT
TGGGAACTCGTGAACGACGATTCCTGTGATTGCGCAGATGGGAGTGATGAGCCTGGTATGTCTACAACAGTTCAT
GTATTCATCTTGTTGAATGATATATCCTTCAGGAACTGGCGCATGTCCTGATACGTTTTTCTATTGTCACAACAA
GGGACACATAGGAGCCTCCATTCCCAGCTCCAGAGTACGCGATGGAATTTGTGGTATGCCCGTTTCATTCATCAC
TATGCTTCGAATCTGTAACTCACACGACCCCTTAAGAGCCACAATGCTGTGATGGTTCAGATGAGCGTCCCGGAG
TTTGTAAGAATGTGTGTGAGGAGGTTGGTGAAGCGCACCAGAAGAAGAATGCGGCTGAGATGAAACTTCGGAAGA
CGGTAAGCTTTTAATCATTTTCGCTGTATCATCAGCTTAGCTGCTCCAGGGGTCTAAAATTCGTTCAACTTATAT
TGCCTTCGCACACAAAGAGAAGAAGCGCTTAGAGGAGCGAACCGCAGCCCTCGAGAAGGAAATTCAGGCCAAGGA
AATAGAGGTTCAACAATTGAAAAGTACGCAAAATATCAATATGCCGAAACGGAACACTGCCTGACCTTTTGCAGA
TACTGCTGAACGTACGGAATCTTTTGATGCTGCTGTTCTCGAACACAAGAAACAATCTCGTGAGTATCTTGATTC
GGACACGCTCTGCTTAGGATGTTGAAGATGATTTATTTAGCGCTTTACTTAAACGTCATCGATCATCATAACGCG
CTTGAGTATCTCCAGAGCGAGGTTGAAAGGTATCGTAAAGCTGAAAAGAAACTTGGAGAAATTCTCGACACTCTC
AGACGCGGTTACAACCCGAACTATCAAGACATGGCCGTCCTAGAGGCAGTTCGTGGTTGGGAGAAACATGCTGAT
CTTCCCCACATTAACGACGTTGGCAAAGAGGGTGAAGCAGCTGAGGAAGAGAAGAAAGAAAAACCGCCTGCTGCA
ACGACGGTCGATGGAGAAGTGTGGACTGAGGAGATGCTGCAAAAGGAGTTGAAGGCGTTAATAAAAACTGATTTT
GACTCGTTGCTAGTGGAAGACGACGAGTACCATCGCTCGAATGAAGTACAAGAAGAGAATCGTAAGTCCTCAGTT
TTAGTTATCTGTGACAGGACCTGTGTTAATTCGCAAATTCATAGAGTTCGATGTTACATCATACCTTCCCGATTT
TGCGGTTGGCTACTATGATCAGCTCAAAGACGGTCTTGTCTCGTTGTTCGGCAGTGCACCAGAAGCCTCCACAAA
GGACTCCACAAAGGGCTCAGGTATTCCTTCTTTTCCTAAACCTCCATGACTTTCCAGTAAACACATTTCTTCTCA
GCCAAGGCAACCAAGGCCCGTGAAGCGTTCAACAAGGCTGATCAGGAGCTACGTCAACTCCAAACAGACAAGCAA
CAGAGTGAACGGGAGGCTGCTAAAATCTTCGACGTAAAGCACTTCGGTGCCGAGGGCGCATGGAAGAAACTTGAT
AATACCTGCATTGAATATGATGACGGAGACTACATCTACGAAACCTGTTTCTTCAAGGAATCCAAGCAAAAACCA
AAGGGCTCAGGAATCACTCAAAGTCTTGGGTACGTGAATATTTAAAAAGGACTCAACTTCGATGGCTGAAGAAGG
TTTTTGTATGGCAGTAACTTTGAATCGTGGAATCCATCACCGGATGTTGAACCCGGAACACCCGAATATTACTCG
AAACAGGTATACAAGCATGGTTCGAGATGTTGGAACGGTCCAGAACGCAATGTTATCGTACGTTCACACCTCCAA
AAAGTCTATTTTTGTCAAAACGGAAATCACTGACGATCGTCTCCTTGACTAGTTTATCCTGACTTGTGGGACTGA
GAATACTATTACATCGGTGCAGGAACTTGAAAAATGTGAATATCAGTTCACAGGGACAACACCAGCACTTTGTTT
ACCAGTGACGGAGTCTAATACCAATAATAAGTCGAGGCAAGAGCTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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