Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|076950
Gene name
Locationscaffold_04:2606743..2607935
Strand-
Gene length (bp)1192
Transcript length (bp)987
Coding sequence length (bp)987
Protein length (aa) 329

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12697 Abhydrolase_6 Alpha/beta hydrolase family 6.9E-13 51 315
PF00561 Abhydrolase_1 alpha/beta hydrolase fold 1.4E-11 68 160
PF12146 Hydrolase_4 Serine aminopeptidase, S33 1.5E-11 86 305

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D5VGV3|RUTD_CAUST Putative aminoacrylate hydrolase RutD OS=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) GN=rutD PE=3 SV=1 30 315 4.0E-13
sp|B7KWT4|RUTD_METC4 Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain CM4 / NCIMB 13688) GN=rutD PE=3 SV=1 36 315 8.0E-13
sp|C7CM33|RUTD_METED Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain DSM 5838 / DM4) GN=rutD PE=3 SV=1 36 315 2.0E-11
sp|P00632|ELH2_ACIAD 3-oxoadipate enol-lactonase 2 OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=catD PE=1 SV=3 29 161 2.0E-11
sp|A8IAD8|RUTD_AZOC5 Putative aminoacrylate hydrolase RutD OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=rutD PE=3 SV=1 31 157 4.0E-11
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Swissprot ID Swissprot Description Start End E-value
sp|D5VGV3|RUTD_CAUST Putative aminoacrylate hydrolase RutD OS=Caulobacter segnis (strain ATCC 21756 / DSM 7131 / JCM 7823 / NBRC 15250 / LMG 17158 / TK0059) GN=rutD PE=3 SV=1 30 315 4.0E-13
sp|B7KWT4|RUTD_METC4 Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain CM4 / NCIMB 13688) GN=rutD PE=3 SV=1 36 315 8.0E-13
sp|C7CM33|RUTD_METED Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain DSM 5838 / DM4) GN=rutD PE=3 SV=1 36 315 2.0E-11
sp|P00632|ELH2_ACIAD 3-oxoadipate enol-lactonase 2 OS=Acinetobacter baylyi (strain ATCC 33305 / BD413 / ADP1) GN=catD PE=1 SV=3 29 161 2.0E-11
sp|A8IAD8|RUTD_AZOC5 Putative aminoacrylate hydrolase RutD OS=Azorhizobium caulinodans (strain ATCC 43989 / DSM 5975 / JCM 20966 / NBRC 14845 / NCIMB 13405 / ORS 571) GN=rutD PE=3 SV=1 31 157 4.0E-11
sp|B1ZB18|RUTD_METPB Putative aminoacrylate hydrolase RutD OS=Methylobacterium populi (strain ATCC BAA-705 / NCIMB 13946 / BJ001) GN=rutD PE=3 SV=1 41 315 2.0E-10
sp|A4VQH7|RUTD_PSEU5 Putative aminoacrylate hydrolase RutD OS=Pseudomonas stutzeri (strain A1501) GN=rutD PE=3 SV=1 36 317 1.0E-07
sp|A9W3H8|RUTD_METEP Putative aminoacrylate hydrolase RutD OS=Methylobacterium extorquens (strain PA1) GN=rutD PE=3 SV=1 36 315 1.0E-07
sp|P26495|PHAB_PSEOL Poly(3-hydroxyalkanoate) depolymerase OS=Pseudomonas oleovorans GN=phaB PE=3 SV=1 87 164 2.0E-07
sp|Q54528|RDMC_STREF Aclacinomycin methylesterase RdmC OS=Streptomyces purpurascens GN=rdmC PE=1 SV=1 35 157 4.0E-06
sp|B9JLT6|RUTD_AGRRK Putative aminoacrylate hydrolase RutD OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) GN=rutD PE=3 SV=1 36 323 5.0E-06
sp|P77044|MHPC_ECOLI 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli (strain K12) GN=mhpC PE=1 SV=4 25 317 7.0E-06
sp|B1XBJ6|MHPC_ECODH 2-hydroxy-6-oxononadienedioate/2-hydroxy-6-oxononatrienedioate hydrolase OS=Escherichia coli (strain K12 / DH10B) GN=mhpC PE=3 SV=2 25 317 7.0E-06
sp|Q9A4N3|RUTD_CAUCR Putative aminoacrylate hydrolase RutD OS=Caulobacter crescentus (strain ATCC 19089 / CB15) GN=rutD PE=3 SV=1 87 315 9.0E-06
sp|B8H1Q3|RUTD_CAUCN Putative aminoacrylate hydrolase RutD OS=Caulobacter crescentus (strain NA1000 / CB15N) GN=rutD PE=3 SV=1 87 315 9.0E-06
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|076950
MEFASLDLPTLFNPSTCVRKGLCPVTVPLTGTKHELYFEQHGRGEKYKIILIMGLNSSSFGWVKQVEWFGSGKAF
QDEEGEGEKSTVLIFDNRGVGNSGYPSGPYSTSTMAEDVICLLDHVGWTEEKGVHVVGISLGGMIAQELAWRIPE
RIGSLVLAVTTPGGWFWNNIPPWKGAMSLTKIMMTPDPLMMAPIVADMLYTQDWLKERDIDEPNKTNRQVQQEAY
LRRVAITKKQRWIGHVSQMVAGLTHHVSAERLREIGEGVGRVAIVVGDEDHLVWREGSRRLKEGMGKVVLEEWRN
TGHGIHVQRWREFNQLVERTIRTGARGV*
Coding >Agabi119p4|076950
ATGGAATTCGCATCTCTAGACCTACCCACACTCTTCAACCCCTCCACCTGTGTTCGTAAAGGACTTTGTCCAGTA
ACCGTACCTCTAACTGGTACGAAACATGAATTATATTTCGAACAACATGGGAGAGGAGAGAAATACAAGATTATA
TTGATTATGGGGTTGAATTCGAGTTCATTTGGGTGGGTGAAACAGGTTGAGTGGTTTGGTAGTGGGAAGGCATTT
CAAGATGAAGAAGGGGAGGGGGAGAAGAGTACAGTATTGATTTTTGATAATCGTGGTGTTGGAAATTCTGGGTAT
CCAAGTGGACCTTATTCGACGTCGACGATGGCGGAGGATGTGATTTGTTTGTTGGATCATGTGGGATGGACTGAG
GAAAAAGGGGTGCATGTGGTTGGAATCAGTTTGGGAGGGATGATTGCTCAAGAGTTGGCATGGAGGATACCCGAA
AGAATTGGATCATTGGTATTGGCAGTGACTACACCTGGAGGATGGTTTTGGAACAACATACCCCCGTGGAAAGGC
GCAATGAGTTTAACAAAGATAATGATGACGCCTGATCCGTTGATGATGGCACCGATAGTGGCAGATATGCTGTAC
ACACAGGATTGGCTAAAGGAAAGAGATATAGACGAGCCCAACAAGACTAATAGACAGGTACAGCAGGAGGCGTAT
TTACGCCGGGTGGCGATAACGAAGAAGCAGCGATGGATAGGGCATGTATCGCAGATGGTGGCGGGGTTGACGCAC
CATGTGTCGGCTGAGCGGCTGAGGGAGATTGGGGAAGGGGTGGGGCGAGTAGCGATTGTGGTGGGTGACGAGGAC
CATCTGGTATGGCGGGAAGGGTCGCGTCGGCTGAAGGAGGGAATGGGGAAAGTGGTGTTGGAGGAGTGGAGGAAT
ACCGGGCACGGGATCCACGTGCAGCGGTGGCGGGAGTTCAATCAGCTGGTGGAGAGGACGATTCGCACGGGTGCA
CGTGGTGTGTAG
Transcript >Agabi119p4|076950
ATGGAATTCGCATCTCTAGACCTACCCACACTCTTCAACCCCTCCACCTGTGTTCGTAAAGGACTTTGTCCAGTA
ACCGTACCTCTAACTGGTACGAAACATGAATTATATTTCGAACAACATGGGAGAGGAGAGAAATACAAGATTATA
TTGATTATGGGGTTGAATTCGAGTTCATTTGGGTGGGTGAAACAGGTTGAGTGGTTTGGTAGTGGGAAGGCATTT
CAAGATGAAGAAGGGGAGGGGGAGAAGAGTACAGTATTGATTTTTGATAATCGTGGTGTTGGAAATTCTGGGTAT
CCAAGTGGACCTTATTCGACGTCGACGATGGCGGAGGATGTGATTTGTTTGTTGGATCATGTGGGATGGACTGAG
GAAAAAGGGGTGCATGTGGTTGGAATCAGTTTGGGAGGGATGATTGCTCAAGAGTTGGCATGGAGGATACCCGAA
AGAATTGGATCATTGGTATTGGCAGTGACTACACCTGGAGGATGGTTTTGGAACAACATACCCCCGTGGAAAGGC
GCAATGAGTTTAACAAAGATAATGATGACGCCTGATCCGTTGATGATGGCACCGATAGTGGCAGATATGCTGTAC
ACACAGGATTGGCTAAAGGAAAGAGATATAGACGAGCCCAACAAGACTAATAGACAGGTACAGCAGGAGGCGTAT
TTACGCCGGGTGGCGATAACGAAGAAGCAGCGATGGATAGGGCATGTATCGCAGATGGTGGCGGGGTTGACGCAC
CATGTGTCGGCTGAGCGGCTGAGGGAGATTGGGGAAGGGGTGGGGCGAGTAGCGATTGTGGTGGGTGACGAGGAC
CATCTGGTATGGCGGGAAGGGTCGCGTCGGCTGAAGGAGGGAATGGGGAAAGTGGTGTTGGAGGAGTGGAGGAAT
ACCGGGCACGGGATCCACGTGCAGCGGTGGCGGGAGTTCAATCAGCTGGTGGAGAGGACGATTCGCACGGGTGCA
CGTGGTGTGTAG
Gene >Agabi119p4|076950
ATGGAATTCGCATCTCTAGACCTACCCACACTCTTCAACCCCTCCACCTGTGTTCGTAAAGGACTTTGTCCAGTA
ACCGTACCTCTAACTGGTACGAAACATGAATTATATTTCGAACAACATGGGAGAGGAGAGAAATACAAGATTATA
TTGATTATGGGGTTGAATTCGAGTTCATTTGGGTGGGTGAAACAGGTTGAGTGGTTTGGTAGTGGGAAGGCATTT
CAAGATGAAGAAGGGGAGGGGGAGAAGAGTACAGTATTGATTTTTGATAATCGTGGTGTTGGAAATTCTGGGTAT
CCAAGTGGACCTTATTCGTGCGTTTTGCGCTATTTTTTCTATTATTTTTTTGGTGTGTTGAGTGAGAATGAAGGA
CGTCGACGATGGCGGAGGATGTGATTTGTTTGTTGGATCATGTGGGATGGACTGAGGAAAAAGGGGTGCATGTGG
TTGGAATCAGTTTGGGAGGGATGATTGCTCAAGGTGAGTCTTTTGTTCCGAGTCTTGCCATGTGTTTACTTATGA
GGTGGTAGAGTTGGCATGGAGGATACCCGAAAGAATTGGATCATTGGTATTGGCAGTGACTACACCTGGAGGATG
GTTTTGGAACAACATACCCCCGGTAATTGATTTATTTTACGTCTACGAACGTGATTAACATCGTAATAGTGGAAA
GGCGCAATGAGTTTAACAAAGATAATGATGACGCCTGATCCGTTGATGATGGCACCGATAGTGGCAGATATGCTG
TACACACAGGATTGGCTAAAGGAAAGAGATATAGACGAGCCCAACAAGACTAATAGACAGGTACAGCAGGAGGTG
AGTTTACGTGTTTTTGTGATGGTGAAAAGGGTACTGAAGTGTGGGGTAGGCGTATTTACGCCGGGTGGCGATAAC
GAAGAAGCAGCGATGGATAGGGCATGTATCGCAGATGGTGGCGGGGTTGACGCACCATGTGTCGGCTGAGCGGCT
GAGGGAGATTGGGGAAGGGGTGGGGCGAGTAGCGATTGTGGTGGGTGACGAGGACCATCTGGTATGGCGGGAAGG
GTCGCGTCGGCTGAAGGAGGGAATGGGGAAAGTGGTGTTGGAGGAGTGGAGGAATACCGGGCACGGGATCCACGT
GCAGCGGTGGCGGGAGTTCAATCAGCTGGTGGAGAGGACGATTCGCACGGGTGCACGTGGTGTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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