© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|076420 |
| Gene name | |
| Location | scaffold_04:2472163..2473143 |
| Strand | - |
| Gene length (bp) | 980 |
| Transcript length (bp) | 819 |
| Coding sequence length (bp) | 819 |
| Protein length (aa) | 273 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF20520 | Ac45-VOA1_TM | V0 complex accessory subunit Ac45/VOA1 transmembrane domain | 9.3E-07 | 222 | 259 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 20 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 230 | 252 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|076420 MMAAKRFLVALVSATFAFADTSLVAWSSSGSTALDALPPSLTTSKFTNHILNNDQLCDFDAIVLIDQPGDHRNGL SSHVISRSISSAPSARSFKLSGSFNLPVTAESLSSRCNARFLSYTPGPSSSGDVSLEEGQKHVLCLKMPENADIE KHESSLAAELSIISSIFPSHFIIYTGPGLSNLHIRQSPETPPRPTIETTTNTSQIPVNNPAASITDVNTTVYFTT GLITALLLVFFILLPVLFIGVGALASIQTPIRMDAPKGYSAVERKNQ* |
| Coding | >Agabi119p4|076420 ATGATGGCTGCCAAACGATTCCTCGTCGCCCTCGTCTCTGCCACTTTTGCCTTTGCGGACACTTCTCTCGTTGCT TGGTCTTCTTCAGGGTCGACTGCGCTCGATGCGCTTCCGCCATCTCTCACGACGTCCAAGTTCACCAATCACATC CTAAACAACGACCAATTATGTGATTTTGACGCTATCGTCCTCATTGACCAACCAGGAGACCACCGCAATGGGCTT TCATCCCATGTCATCTCGCGCAGCATCTCTTCAGCACCCTCAGCACGCTCTTTTAAATTATCCGGTTCTTTCAAT TTACCAGTTACAGCTGAAAGTCTTTCGTCCCGCTGTAACGCCCGTTTCTTGAGTTACACACCTGGACCGTCATCA TCGGGTGACGTTTCACTCGAGGAAGGCCAGAAACACGTCTTGTGCTTGAAAATGCCCGAGAACGCTGATATTGAA AAACATGAATCTTCACTTGCAGCAGAGCTTTCCATCATTTCCTCCATCTTCCCTTCCCACTTCATCATCTACACC GGTCCTGGCCTCTCAAACCTGCACATCCGTCAATCTCCAGAAACACCCCCTCGTCCAACCATAGAAACCACCACC AACACTTCTCAAATACCTGTCAACAACCCCGCTGCCTCCATTACAGATGTCAACACCACTGTATACTTCACAACC GGCTTGATTACCGCTCTCCTCCTCGTTTTCTTCATTCTCCTCCCTGTTCTATTCATCGGTGTTGGAGCTTTGGCT AGTATCCAAACACCCATTCGTATGGACGCTCCAAAGGGTTATAGTGCAGTTGAGAGAAAGAACCAATAG |
| Transcript | >Agabi119p4|076420 ATGATGGCTGCCAAACGATTCCTCGTCGCCCTCGTCTCTGCCACTTTTGCCTTTGCGGACACTTCTCTCGTTGCT TGGTCTTCTTCAGGGTCGACTGCGCTCGATGCGCTTCCGCCATCTCTCACGACGTCCAAGTTCACCAATCACATC CTAAACAACGACCAATTATGTGATTTTGACGCTATCGTCCTCATTGACCAACCAGGAGACCACCGCAATGGGCTT TCATCCCATGTCATCTCGCGCAGCATCTCTTCAGCACCCTCAGCACGCTCTTTTAAATTATCCGGTTCTTTCAAT TTACCAGTTACAGCTGAAAGTCTTTCGTCCCGCTGTAACGCCCGTTTCTTGAGTTACACACCTGGACCGTCATCA TCGGGTGACGTTTCACTCGAGGAAGGCCAGAAACACGTCTTGTGCTTGAAAATGCCCGAGAACGCTGATATTGAA AAACATGAATCTTCACTTGCAGCAGAGCTTTCCATCATTTCCTCCATCTTCCCTTCCCACTTCATCATCTACACC GGTCCTGGCCTCTCAAACCTGCACATCCGTCAATCTCCAGAAACACCCCCTCGTCCAACCATAGAAACCACCACC AACACTTCTCAAATACCTGTCAACAACCCCGCTGCCTCCATTACAGATGTCAACACCACTGTATACTTCACAACC GGCTTGATTACCGCTCTCCTCCTCGTTTTCTTCATTCTCCTCCCTGTTCTATTCATCGGTGTTGGAGCTTTGGCT AGTATCCAAACACCCATTCGTATGGACGCTCCAAAGGGTTATAGTGCAGTTGAGAGAAAGAACCAATAG |
| Gene | >Agabi119p4|076420 ATGATGGCTGCCAAACGATTCCTCGTCGCCCTCGTCTCTGCCACTTTTGCCTTTGCGGACACTTCTCTCGTTGCT TGGTCTTCTTCAGGGTAATATATAGTTTTTAAGTTGGGTGATATGGCTAACGAAAACTAGGTCGACTGCGCTCGA TGCGCTTCCGCCATCTCTCACGACGTCCAAGTTCACCAATCACATCCTAAACAACGACCAATTATGTGATTTTGA CGCTATCGTCCTCATTGACCAACCAGGAGTACGTCTCCTCATTGTATCTTATCACAAGCATGTTTCCTAAGTTGA ACTTTCGTCTTCTTCAGGACCACCGCAATGGGCTTTCATCCCATGTCATCTCGCGCAGCATCTCTTCAGCACCCT CAGCACGCTCTTTTAAATTATCCGGTTCTTTCAATTTACCAGTTACAGCTGAAAGTCTTTCGTCCCGCTGTAACG CCCGTTTCTTGAGTTACACACCTGGACCGTCATCATCGGGTGACGTTTCACTCGAGGAAGGCCAGAAACACGTCT TGTGCTTGAAAATGCCCGAGAACGCTGATATTGAAAAACATGGTACTTAATTTTTCACTGTTTGACTGAAACGAA TTGAACCGGTACCTTTAGAATCTTCACTTGCAGCAGAGCTTTCCATCATTTCCTCCATCTTCCCTTCCCACTTCA TCATCTACACCGGTCCTGGCCTCTCAAACCTGCACATCCGTCAATCTCCAGAAACACCCCCTCGTCCAACCATAG AAACCACCACCAACACTTCTCAAATACCTGTCAACAACCCCGCTGCCTCCATTACAGATGTCAACACCACTGTAT ACTTCACAACCGGCTTGATTACCGCTCTCCTCCTCGTTTTCTTCATTCTCCTCCCTGTTCTATTCATCGGTGTTG GAGCTTTGGCTAGTATCCAAACACCCATTCGTATGGACGCTCCAAAGGGTTATAGTGCAGTTGAGAGAAAGAACC AATAG |