Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|073430
Gene name
Locationscaffold_04:1837186..1837771
Strand+
Gene length (bp)585
Transcript length (bp)534
Coding sequence length (bp)534
Protein length (aa) 178

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03625 DUF302 Domain of unknown function DUF302 5.6E-06 91 138

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 12 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|073430
MSTSSITITDLNAKLVTFNTPLSFTQVISRLDEAVNKQGSANILAEMRNAKTRAEIDQVVESITGLTNDFLYFVD
MRHNRWLDIYHATTTPQVSIYTIGNPLFAQAILKHDLRAALHIPPRLVVLEKSEGQGTQVMYQLPSSVMVLPGND
DAELKEKVEVLDRKLEALVARITEVIN*
Coding >Agabi119p4|073430
ATGTCTACCTCCTCAATCACTATCACAGACCTCAATGCCAAACTAGTCACATTCAACACCCCCCTCTCTTTTACC
CAAGTCATCTCTCGACTAGACGAAGCTGTAAACAAACAAGGCTCGGCAAACATATTGGCAGAAATGAGAAACGCC
AAGACTCGTGCTGAAATCGACCAAGTTGTTGAGTCAATAACAGGACTCACAAACGACTTCTTATACTTTGTCGAC
ATGCGACACAACCGGTGGCTAGATATTTATCACGCCACCACCACACCACAAGTATCGATCTATACGATTGGAAAC
CCGCTTTTTGCACAGGCTATCCTCAAACACGACCTCCGAGCAGCCTTGCATATACCTCCTCGATTGGTTGTTTTA
GAGAAAAGTGAGGGCCAGGGAACACAAGTGATGTATCAACTCCCTTCATCTGTCATGGTGCTCCCCGGAAATGAC
GACGCGGAGTTGAAAGAAAAGGTGGAGGTACTGGATAGGAAACTTGAAGCACTGGTGGCAAGGATAACCGAGGTC
ATAAATTAG
Transcript >Agabi119p4|073430
ATGTCTACCTCCTCAATCACTATCACAGACCTCAATGCCAAACTAGTCACATTCAACACCCCCCTCTCTTTTACC
CAAGTCATCTCTCGACTAGACGAAGCTGTAAACAAACAAGGCTCGGCAAACATATTGGCAGAAATGAGAAACGCC
AAGACTCGTGCTGAAATCGACCAAGTTGTTGAGTCAATAACAGGACTCACAAACGACTTCTTATACTTTGTCGAC
ATGCGACACAACCGGTGGCTAGATATTTATCACGCCACCACCACACCACAAGTATCGATCTATACGATTGGAAAC
CCGCTTTTTGCACAGGCTATCCTCAAACACGACCTCCGAGCAGCCTTGCATATACCTCCTCGATTGGTTGTTTTA
GAGAAAAGTGAGGGCCAGGGAACACAAGTGATGTATCAACTCCCTTCATCTGTCATGGTGCTCCCCGGAAATGAC
GACGCGGAGTTGAAAGAAAAGGTGGAGGTACTGGATAGGAAACTTGAAGCACTGGTGGCAAGGATAACCGAGGTC
ATAAATTAG
Gene >Agabi119p4|073430
ATGTCTACCTCCTCAATCACTATCACAGACCTCAATGCCAAACTAGTCACATTCAACACCCCCCTCTCTTTTACC
CAAGTCATCTCTCGACTAGACGAAGCTGTAAACAAACAAGGCTCGGCAAACATATTGGCAGAAATGAGAAACGCC
AAGACTCGTGCTGAAATCGACCAAGTTGTTGAGTCAATAACAGGACTCACAAACGACTTCTTGTGCGTCTCACTG
CATGTTATTCCTTTGGCAAAATACTAAGTTTTGAACAGATACTTTGTCGACATGCGACACAACCGGTGGCTAGAT
ATTTATCACGCCACCACCACACCACAAGTATCGATCTATACGATTGGAAACCCGCTTTTTGCACAGGCTATCCTC
AAACACGACCTCCGAGCAGCCTTGCATATACCTCCTCGATTGGTTGTTTTAGAGAAAAGTGAGGGCCAGGGAACA
CAAGTGATGTATCAACTCCCTTCATCTGTCATGGTGCTCCCCGGAAATGACGACGCGGAGTTGAAAGAAAAGGTG
GAGGTACTGGATAGGAAACTTGAAGCACTGGTGGCAAGGATAACCGAGGTCATAAATTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail