Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|072990
Gene name
Locationscaffold_04:1728973..1732149
Strand+
Gene length (bp)3176
Transcript length (bp)2781
Coding sequence length (bp)2781
Protein length (aa) 927

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13418 Kelch_4 Galactose oxidase, central domain 5.9E-05 120 150

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

Domain # Start End Length
1 490 507 17
2 520 542 22
3 562 584 22
4 761 783 22
5 788 810 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|072990
MARSIPVFIFLLLSLALADDIATNTPVPPLQWINLTNLLQGNSPPPLKDAAIGYDETSRSIILFGGESQGGFPQG
QTYLLNLDSLTWDVPSPPSGLHRTPPARSAALAGEDFAASNRRAFVVVGGKGSDEKPLSDVWAFDFNNEFWSPVS
VLSGGPSARWGASGGIDPRVSPFQDPVVPGPNNTFYMTGGTDGVTAFPLSDVWRLHLSGTLSSNLPNSTSGSWDR
LTIGSFPARVGDGNTVVGQQIVAVGGCGAAQTSDSCASQDSFVINVARNSGISPAACPIPRLGPAVTPNFNTFTP
SFASQAFMVLGTFNESLWKDDGSLEKGGVDVLDINTGTWTRVMPSGDPGSSGSLTLETYPSPREGASILSYQMGL
VGSSRNSSADTIVFGGRDAAGKYLSEVWLLRAYKGVITMSDSQWDGFGNGRLQTGVAADGQGVKIRYLSQCASPP
ISTSSVTPSSSSGPAPTGMISPGPAVLEFQVYRTSLSHKLLAVLSLIVIQVAMVVLRNSIPFPFTYMFTAIGIGG
YALGVTGLALAFSTISIAPSLEKRSLPSLPSPHLRTGHGLAGLVFFACLYVLVPVWMFATATAEYLRGPSRKRCS
MSMAAEAVEEKSEQQTTGPSLSTFQSVHNVSPPSSPRPRTQSWGPSSLWRRSLEAGFSSDSDSVTSGTPRAFEVV
NRPRRFRQSSGATAPIEAPRPASRSLGEIDWLLRRRSLNAVGELDYAITQAQNARHSTPGTADILLVPEDDPSNI
PAKLPTVSQICLHLFIHASILGLNVVALDMLWTNASKVFFILFLIWIIVFYVLIFLLAWNYRPSVSILSTLLYRL
RQPPSVQPTSEKSSTPLPTSSPTSRLTPFQNSGPYLHQPPYRAAATDEYSGSHFGPRSVEAEEDDEVDEITRQRI
IEEEMDRREVSIVTVPKRRLWVANPS*
Coding >Agabi119p4|072990
ATGGCTCGCAGTATACCCGTTTTTATTTTCCTCCTTCTCTCTTTAGCCCTCGCAGATGATATTGCAACGAACACT
CCAGTACCCCCGCTCCAGTGGATCAACCTCACCAATCTCCTGCAGGGAAACTCCCCACCTCCACTTAAGGATGCT
GCCATAGGATACGATGAAACCAGTCGCTCCATTATTCTATTTGGGGGTGAATCACAAGGCGGCTTTCCACAAGGG
CAGACGTATTTGCTCAATCTTGACTCTTTAACCTGGGACGTCCCTTCGCCCCCCTCGGGCCTCCACCGAACTCCT
CCAGCTAGGAGTGCTGCCCTTGCTGGAGAAGATTTTGCCGCTAGCAATCGACGTGCTTTTGTAGTAGTCGGAGGG
AAGGGATCTGATGAGAAGCCTCTTTCAGATGTTTGGGCTTTTGACTTCAATAACGAATTTTGGTCCCCCGTATCC
GTCTTATCTGGTGGTCCCTCTGCTCGTTGGGGTGCTTCGGGTGGCATAGACCCTCGTGTATCCCCATTTCAGGAT
CCTGTGGTCCCGGGACCGAACAACACTTTTTACATGACAGGCGGTACAGATGGAGTGACAGCCTTCCCCCTATCT
GATGTGTGGAGGTTGCACCTTTCCGGAACTCTCTCCTCCAATCTTCCAAATAGTACATCCGGCAGTTGGGATCGA
TTGACAATAGGTTCATTTCCAGCAAGAGTCGGCGATGGAAACACCGTCGTGGGTCAGCAAATCGTTGCCGTGGGC
GGCTGTGGTGCAGCTCAAACCAGTGACTCCTGTGCTAGCCAAGATTCTTTCGTGATAAACGTGGCGCGTAATTCC
GGAATATCTCCAGCGGCATGCCCCATCCCGCGGCTCGGTCCTGCAGTGACTCCCAATTTTAATACTTTTACGCCC
TCATTCGCTTCTCAGGCCTTCATGGTGCTGGGTACTTTCAATGAATCGTTGTGGAAGGATGATGGTAGCCTTGAA
AAGGGTGGAGTAGACGTTCTCGACATTAACACCGGTACTTGGACTCGAGTTATGCCATCTGGCGATCCAGGAAGC
TCTGGGTCGCTGACGTTAGAGACCTATCCCAGTCCACGTGAAGGTGCATCCATTCTCTCGTACCAGATGGGCCTG
GTAGGTTCTTCGCGCAATTCTTCAGCCGACACTATTGTTTTCGGTGGCCGAGATGCAGCCGGGAAATATCTCTCT
GAAGTTTGGTTGTTACGCGCGTACAAGGGAGTCATCACTATGTCTGATTCCCAATGGGACGGTTTCGGGAACGGT
CGCCTTCAAACCGGTGTTGCGGCTGATGGTCAAGGCGTCAAGATACGATATCTCTCTCAGTGTGCATCCCCCCCT
ATTTCAACTTCAAGTGTAACGCCGTCGAGTTCGTCAGGCCCAGCACCGACGGGCATGATAAGCCCTGGTCCTGCA
GTCCTTGAATTCCAAGTATATCGAACGTCTTTATCACACAAGCTACTTGCGGTGCTCTCACTAATCGTAATACAA
GTCGCCATGGTTGTTCTTCGGAATTCTATCCCGTTTCCCTTCACTTACATGTTCACGGCGATTGGTATTGGAGGT
TATGCTTTGGGCGTCACTGGCTTGGCCCTCGCATTCAGCACGATATCCATTGCGCCGAGTCTGGAGAAGCGCTCA
CTTCCATCACTTCCATCACCTCATTTACGCACGGGTCATGGTCTTGCTGGCCTCGTTTTTTTCGCATGCCTATAT
GTACTTGTCCCAGTGTGGATGTTTGCGACTGCCACTGCGGAATACCTGCGGGGACCATCTAGAAAACGTTGCTCG
ATGTCAATGGCCGCTGAAGCAGTCGAGGAGAAATCCGAACAGCAGACCACAGGTCCAAGTCTGAGCACCTTTCAA
AGTGTACATAACGTTTCTCCACCATCATCACCCCGCCCTCGCACGCAGTCATGGGGCCCTTCCAGTCTATGGAGA
CGTAGCTTGGAGGCTGGGTTTTCCAGCGACAGCGATTCCGTCACGTCTGGCACGCCGCGTGCATTTGAAGTTGTC
AACAGACCGCGTCGCTTCCGCCAATCGAGTGGTGCTACTGCACCAATTGAGGCACCCCGCCCTGCATCAAGGAGT
CTCGGCGAAATTGACTGGTTACTTCGACGGCGAAGTCTCAATGCGGTGGGAGAGCTTGATTATGCTATCACGCAG
GCACAGAACGCACGTCATTCTACACCAGGGACGGCGGATATTTTACTCGTCCCTGAGGATGATCCATCAAATATT
CCCGCCAAATTGCCGACTGTCTCACAAATTTGCCTTCACTTATTCATACACGCTTCCATCCTGGGATTGAATGTA
GTCGCCCTTGATATGCTTTGGACAAATGCCTCAAAAGTTTTCTTCATCCTCTTCCTCATCTGGATAATTGTTTTC
TACGTTTTGATTTTTTTACTTGCTTGGAACTATCGTCCAAGTGTTTCCATTCTTTCCACTCTCTTGTATCGTCTG
CGTCAGCCTCCATCAGTCCAGCCCACATCAGAAAAATCATCAACACCCCTTCCAACCTCATCGCCTACTTCACGG
CTGACGCCGTTCCAGAATAGTGGGCCATATCTACATCAACCGCCCTATCGTGCTGCCGCCACAGATGAGTATTCT
GGTTCTCATTTCGGTCCTCGAAGCGTAGAGGCAGAGGAGGACGACGAAGTAGACGAAATCACCAGACAGCGAATC
ATTGAAGAGGAGATGGATAGGCGCGAAGTTTCTATCGTTACCGTACCCAAACGCAGGCTGTGGGTGGCTAATCCT
TCTTAA
Transcript >Agabi119p4|072990
ATGGCTCGCAGTATACCCGTTTTTATTTTCCTCCTTCTCTCTTTAGCCCTCGCAGATGATATTGCAACGAACACT
CCAGTACCCCCGCTCCAGTGGATCAACCTCACCAATCTCCTGCAGGGAAACTCCCCACCTCCACTTAAGGATGCT
GCCATAGGATACGATGAAACCAGTCGCTCCATTATTCTATTTGGGGGTGAATCACAAGGCGGCTTTCCACAAGGG
CAGACGTATTTGCTCAATCTTGACTCTTTAACCTGGGACGTCCCTTCGCCCCCCTCGGGCCTCCACCGAACTCCT
CCAGCTAGGAGTGCTGCCCTTGCTGGAGAAGATTTTGCCGCTAGCAATCGACGTGCTTTTGTAGTAGTCGGAGGG
AAGGGATCTGATGAGAAGCCTCTTTCAGATGTTTGGGCTTTTGACTTCAATAACGAATTTTGGTCCCCCGTATCC
GTCTTATCTGGTGGTCCCTCTGCTCGTTGGGGTGCTTCGGGTGGCATAGACCCTCGTGTATCCCCATTTCAGGAT
CCTGTGGTCCCGGGACCGAACAACACTTTTTACATGACAGGCGGTACAGATGGAGTGACAGCCTTCCCCCTATCT
GATGTGTGGAGGTTGCACCTTTCCGGAACTCTCTCCTCCAATCTTCCAAATAGTACATCCGGCAGTTGGGATCGA
TTGACAATAGGTTCATTTCCAGCAAGAGTCGGCGATGGAAACACCGTCGTGGGTCAGCAAATCGTTGCCGTGGGC
GGCTGTGGTGCAGCTCAAACCAGTGACTCCTGTGCTAGCCAAGATTCTTTCGTGATAAACGTGGCGCGTAATTCC
GGAATATCTCCAGCGGCATGCCCCATCCCGCGGCTCGGTCCTGCAGTGACTCCCAATTTTAATACTTTTACGCCC
TCATTCGCTTCTCAGGCCTTCATGGTGCTGGGTACTTTCAATGAATCGTTGTGGAAGGATGATGGTAGCCTTGAA
AAGGGTGGAGTAGACGTTCTCGACATTAACACCGGTACTTGGACTCGAGTTATGCCATCTGGCGATCCAGGAAGC
TCTGGGTCGCTGACGTTAGAGACCTATCCCAGTCCACGTGAAGGTGCATCCATTCTCTCGTACCAGATGGGCCTG
GTAGGTTCTTCGCGCAATTCTTCAGCCGACACTATTGTTTTCGGTGGCCGAGATGCAGCCGGGAAATATCTCTCT
GAAGTTTGGTTGTTACGCGCGTACAAGGGAGTCATCACTATGTCTGATTCCCAATGGGACGGTTTCGGGAACGGT
CGCCTTCAAACCGGTGTTGCGGCTGATGGTCAAGGCGTCAAGATACGATATCTCTCTCAGTGTGCATCCCCCCCT
ATTTCAACTTCAAGTGTAACGCCGTCGAGTTCGTCAGGCCCAGCACCGACGGGCATGATAAGCCCTGGTCCTGCA
GTCCTTGAATTCCAAGTATATCGAACGTCTTTATCACACAAGCTACTTGCGGTGCTCTCACTAATCGTAATACAA
GTCGCCATGGTTGTTCTTCGGAATTCTATCCCGTTTCCCTTCACTTACATGTTCACGGCGATTGGTATTGGAGGT
TATGCTTTGGGCGTCACTGGCTTGGCCCTCGCATTCAGCACGATATCCATTGCGCCGAGTCTGGAGAAGCGCTCA
CTTCCATCACTTCCATCACCTCATTTACGCACGGGTCATGGTCTTGCTGGCCTCGTTTTTTTCGCATGCCTATAT
GTACTTGTCCCAGTGTGGATGTTTGCGACTGCCACTGCGGAATACCTGCGGGGACCATCTAGAAAACGTTGCTCG
ATGTCAATGGCCGCTGAAGCAGTCGAGGAGAAATCCGAACAGCAGACCACAGGTCCAAGTCTGAGCACCTTTCAA
AGTGTACATAACGTTTCTCCACCATCATCACCCCGCCCTCGCACGCAGTCATGGGGCCCTTCCAGTCTATGGAGA
CGTAGCTTGGAGGCTGGGTTTTCCAGCGACAGCGATTCCGTCACGTCTGGCACGCCGCGTGCATTTGAAGTTGTC
AACAGACCGCGTCGCTTCCGCCAATCGAGTGGTGCTACTGCACCAATTGAGGCACCCCGCCCTGCATCAAGGAGT
CTCGGCGAAATTGACTGGTTACTTCGACGGCGAAGTCTCAATGCGGTGGGAGAGCTTGATTATGCTATCACGCAG
GCACAGAACGCACGTCATTCTACACCAGGGACGGCGGATATTTTACTCGTCCCTGAGGATGATCCATCAAATATT
CCCGCCAAATTGCCGACTGTCTCACAAATTTGCCTTCACTTATTCATACACGCTTCCATCCTGGGATTGAATGTA
GTCGCCCTTGATATGCTTTGGACAAATGCCTCAAAAGTTTTCTTCATCCTCTTCCTCATCTGGATAATTGTTTTC
TACGTTTTGATTTTTTTACTTGCTTGGAACTATCGTCCAAGTGTTTCCATTCTTTCCACTCTCTTGTATCGTCTG
CGTCAGCCTCCATCAGTCCAGCCCACATCAGAAAAATCATCAACACCCCTTCCAACCTCATCGCCTACTTCACGG
CTGACGCCGTTCCAGAATAGTGGGCCATATCTACATCAACCGCCCTATCGTGCTGCCGCCACAGATGAGTATTCT
GGTTCTCATTTCGGTCCTCGAAGCGTAGAGGCAGAGGAGGACGACGAAGTAGACGAAATCACCAGACAGCGAATC
ATTGAAGAGGAGATGGATAGGCGCGAAGTTTCTATCGTTACCGTACCCAAACGCAGGCTGTGGGTGGCTAATCCT
TCTTAA
Gene >Agabi119p4|072990
ATGGCTCGCAGTATACCCGTTTTTATTTTCCTCCTTCTCTCTTTAGCCCTCGCAGATGATATTGCAACGAACACT
CCAGTACCCCCGCTCCAGTGGATCAACCTCACCAATCTCCTGCAGGGAAACTCCCCACCTCCACTTAAGGATGCT
GCCATAGGATACGATGAAACCAGGTACTTGTTTTTTTTTTTTTGACCTCTCTCTATTCCCTCACAGATCGTCTCC
CCAGTCGCTCCATTATTCTATTTGGGGGTGAATCACAAGGCGGCTTTCCACAAGGGCAGACGTATTTGTACGTTT
TCATCCTCCCGATAAGCTTTTGTTCTCACTCACCCATCCTCAGGCTCAATCTTGACTCTTTAACCTGGGACGTCC
CTTCGCCCCCCTCGGGCCTCCACCGAACTCCTCCAGCTAGGAGTGCTGCCCTTGCTGGAGAAGATTTTGCCGCTA
GCAAGTATGTCGGTCTCCCCGTCATTTACTCATTTACTCACCTTTACTCCCCAGTCGACGTGCTTTTGTAGTAGT
CGGAGGGAAGGGATCTGATGAGAAGCCTCTTTCAGATGTTTGGGTGCGCTTTTTCAGTGTTCTTGGTGCATGCCT
GTAGTTCATCTTCAAACAGGCTTTTGACTTCAATAACGAATTTTGGTCCCCCGTATCCGTCTTATCTGGTGGTCC
CTCTGCTCGTTGGGGTGCTTCGGGTGGCATAGACCCTCGTGTATCCCCATTTCAGGATCCTGTGGTCCCGGGACC
GAACAACACTTTTTACATGACAGGCGGTACAGATGGAGTGACAGCCTTCCCCCTATCTGATGTGTGGAGGTTGCA
CCTTTCCGGAACTCTCTCCTCCAATCTTCCAAATAGTACATCCGGCAGTTGGGATCGATTGACAATAGGTTCATT
TCCAGCAAGAGTCGGCGATGGAAACACCGTCGTGGGTCAGCAAATCGTTGCCGTGGGCGGCTGTGGTGCAGCTCA
AACCAGTGACTCCTGTGCTAGCCAAGATTCTTTCGTGATAAACGTGGCGCGTAATTCCGGAATATCTCCAGCGGC
ATGCCCCATCCCGCGGCTCGGTCCTGCAGTGACTCCCAATTTTAATACTTTTACGCCCTCATTCGCTTCTCAGGC
CTTCATGGTGCTGGGTACTTTCAATGAATCGTTGTGGAAGGATGATGGTAGCCTTGAAAAGGGTGGAGTAGTACG
TGTCCTTTCTGTTGTCATTTTCTTAATATTGGGAAATTAACGCTATACAAGGACGTTCTCGACATTAACACCGGT
ACTTGGACTCGAGTTATGCCATCTGGCGATCCAGGAAGCTCTGGGTCGCTGACGTTAGAGACCTATCCCAGTCCA
CGTGAAGGTGCATCCATTCTCTCGTACCAGATGGGCCTGGTAGGTTCTTCGCGCAATTCTTCAGCCGACACTATT
GTAAGTTGTTCCGTTATACATTCTCATTTGGCTTTGATACACACACATATACACACAGGTTTTCGGTGGCCGAGA
TGCAGCCGGGAAATATCTCTCTGAAGTTTGGTTGTTACGCGCGTACAAGGGAGTCATCACTATGTCTGATTCCCA
ATGGGACGGTTTCGGGAACGGTCGCCTTCAAACCGGTGTTGCGGCTGATGGTCAAGGCGTCAAGATACGATATCT
CTCTCAGTGTGCATCCCCCCCTATTTCAACTTCAAGTGTAACGCCGTCGAGTTCGTCAGGCCCAGCACCGACGGG
CATGATAAGCCCTGGTCCTGCAGTCCTTGAATTCCAAGTATATCGAACGTCTTTATCACACAAGCTACTTGCGGT
GCTCTCACTAATCGTAATACAAGTCGCCATGGTTGTTCTTCGGAATTCTATCCCGTTTCCCTTCACTTACATGTT
CACGGCGATTGGTATTGGAGGTTATGCTTTGGGCGTCACTGGCTTGGCCCTCGCATTCAGCACGATATCCATTGC
GCCGAGTCTGGAGAAGCGCTCACTTCCATCACTTCCATCACCTCATTTACGCACGGGTCATGGTCTTGCTGGCCT
CGTTTTTTTCGCATGCCTATATGTACTTGTCCCAGTGTGGATGTTTGCGACTGCCACTGCGGAATACCTGCGGGG
ACCATCTAGAAAACGTTGCTCGATGTCAATGGCCGCTGAAGCAGTCGAGGAGAAATCCGAACAGCAGACCACAGG
TCCAAGTCTGAGCACCTTTCAAAGTGTACATAACGTTTCTCCACCATCATCACCCCGCCCTCGCACGCAGTCATG
GGGCCCTTCCAGTCTATGGAGACGTAGCTTGGAGGCTGGGTTTTCCAGCGACAGCGATTCCGTCACGTCTGGCAC
GCCGCGTGCATTTGAAGTTGTCAACAGACCGCGTCGCTTCCGCCAATCGAGTGGTGCTACTGCACCAATTGAGGC
ACCCCGCCCTGCATCAAGGAGTCTCGGCGAAATTGACTGGTTACTTCGACGGCGAAGTCTCAATGCGGTGGTGAG
TCGACTGTATATCTCTTTCCTCATCAGTCATCTTTAATGCTGTATTTTATTCTTTCTCATTTTTTCAGGGAGAGC
TTGATTATGCTATCACGCAGGCACAGAACGCACGTCATTCTACACCAGGGACGGCGGATATTTTACTCGTCCCTG
AGGATGATCCATCAAATATTCCCGCCAAATTGCCGACTGTCTCACAAATTTGCCTTCACTTATTCATACACGCTT
CCATCCTGGGATTGAATGTAGTCGCCCTTGATATGCTTTGGACAAATGCCTCAAAAGTTTTCTTCATCCTCTTCC
TCATCTGGATAATTGTTTTCTACGTTTTGATTTTTTTACTTGCTTGGAACTATCGTCCAAGTGTTTCCATTCTTT
CCACTCTCTTGTATCGTCTGCGTCAGCCTCCATCAGTCCAGCCCACATCAGAAAAATCATCAACACCCCTTCCAA
CCTCATCGCCTACTTCACGGCTGACGCCGTTCCAGAATAGTGGGCCATATCTACATCAACCGCCCTATCGTGCTG
CCGCCACAGATGAGTATTCTGGTTCTCATTTCGGTCCTCGAAGCGTAGAGGCAGAGGAGGACGACGAAGTAGACG
AAATCACCAGACAGCGAATCATTGAAGAGGAGATGGATAGGCGCGAAGTTTCTATCGTTACCGTACCCAAACGCA
GGCTGTGGGTGGCTAATCCTTCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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