Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|072910
Gene name
Locationscaffold_04:1718563..1720334
Strand-
Gene length (bp)1771
Transcript length (bp)1500
Coding sequence length (bp)1500
Protein length (aa) 500

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04597 Ribophorin_I Ribophorin I 5.8E-124 35 485

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q4R4T0|RPN1_MACFA Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Macaca fascicularis GN=RPN1 PE=2 SV=1 37 494 5.0E-55
sp|Q5RFB6|RPN1_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Pongo abelii GN=RPN1 PE=2 SV=1 37 494 1.0E-54
sp|P04843|RPN1_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Homo sapiens GN=RPN1 PE=1 SV=1 37 498 2.0E-54
sp|Q54C27|OST1_DICDI Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Dictyostelium discoideum GN=ost1 PE=2 SV=1 37 497 2.0E-53
sp|Q91YQ5|RPN1_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus GN=Rpn1 PE=1 SV=1 37 498 2.0E-53
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Swissprot ID Swissprot Description Start End E-value
sp|Q4R4T0|RPN1_MACFA Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Macaca fascicularis GN=RPN1 PE=2 SV=1 37 494 5.0E-55
sp|Q5RFB6|RPN1_PONAB Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Pongo abelii GN=RPN1 PE=2 SV=1 37 494 1.0E-54
sp|P04843|RPN1_HUMAN Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Homo sapiens GN=RPN1 PE=1 SV=1 37 498 2.0E-54
sp|Q54C27|OST1_DICDI Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Dictyostelium discoideum GN=ost1 PE=2 SV=1 37 497 2.0E-53
sp|Q91YQ5|RPN1_MOUSE Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus GN=Rpn1 PE=1 SV=1 37 498 2.0E-53
sp|Q9GMB0|RPN1_PIG Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Sus scrofa GN=RPN1 PE=1 SV=1 37 494 2.0E-52
sp|P07153|RPN1_RAT Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus GN=Rpn1 PE=2 SV=1 37 498 6.0E-52
sp|Q0DJC5|OST1A_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A OS=Oryza sativa subsp. japonica GN=OST1A PE=2 SV=1 115 494 7.0E-45
sp|Q9GZH4|RPN1_CAEEL Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Caenorhabditis elegans GN=ribo-1 PE=3 SV=2 34 492 4.0E-41
sp|Q9ZUA0|OST1B_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B OS=Arabidopsis thaliana GN=OST1B PE=2 SV=1 119 495 7.0E-40
sp|B9FDT1|OST1B_ORYSJ Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B OS=Oryza sativa subsp. japonica GN=OST1B PE=2 SV=1 134 494 5.0E-39
sp|Q9SFX3|OST1A_ARATH Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A OS=Arabidopsis thaliana GN=OST1A PE=2 SV=1 38 494 2.0E-38
sp|P41543|OST1_YEAST Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=OST1 PE=1 SV=1 14 492 2.0E-37
sp|Q10176|OST1_SCHPO Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ost1 PE=3 SV=1 35 467 2.0E-27
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GO

GO Term Description Terminal node
GO:0006486 protein glycosylation Yes
GO:0016021 integral component of membrane Yes
GO:0043412 macromolecule modification No
GO:1901564 organonitrogen compound metabolic process No
GO:0005575 cellular_component No
GO:0070085 glycosylation No
GO:0110165 cellular anatomical entity No
GO:0008152 metabolic process No
GO:0008150 biological_process No
GO:0043170 macromolecule metabolic process No
GO:0044238 primary metabolic process No
GO:0071704 organic substance metabolic process No
GO:0031224 intrinsic component of membrane No
GO:0019538 protein metabolic process No
GO:0043413 macromolecule glycosylation No
GO:0006807 nitrogen compound metabolic process No
GO:0036211 protein modification process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 27 0.45

Transmembrane Domains

Domain # Start End Length
1 468 485 17

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|072910
MPLGWRTLPQLLFVALASIIHTSCSAAAAETGVAFENSAIVRTVALGGSVVHVTTTIAIKSLADEQDIYTVSFPR
RERDASSFLEVRVKNQKDPLQIREKPFYGNAKFTEVDVVLPEKLAVNATLNLVVETIQTHMTDPWPEFASQTDQQ
ALRYTTDLYVISRYPTLVQRTKIKALVPRIISYTTPTNVDAFTTGNVVAKSGAVVTYGPFSSIPVSTNKDFLKTY
QQPVTVRYYHEQPVLEVTSYKRAVEISHWGSNINTEDQVVLKNAGPKLKGHFSRVDYQGQLYKGSQVPHVLHSLS
LDLPPGIDNVYYYDQIGNVSTSKLNVAPAVAKGEPVVKTSLLNMKLRYPLMGGWNYTFTVGWDADLAGVAGYNSA
TGEYNVEIPIMTTIPGAVVNQHELKIVLPEGATDIEVVTPYPSLTLWLDKHTAYLDTIGRPAIMFEYKDLTPAHA
KNIYVRYKLSSGDHFRKPVAVSAVFFGLFFFTFVVRRIDLTIPKKQKAT*
Coding >Agabi119p4|072910
ATGCCACTTGGTTGGCGAACGCTCCCTCAACTTCTCTTCGTCGCTCTCGCCTCTATCATCCACACATCATGCTCC
GCAGCGGCGGCGGAAACAGGCGTAGCTTTTGAGAACAGCGCGATCGTGCGCACAGTAGCGTTAGGTGGTTCAGTC
GTCCACGTCACGACGACAATCGCAATCAAGAGTCTGGCCGACGAGCAAGATATATACACAGTCTCATTTCCTCGC
AGGGAGAGGGACGCTTCGAGTTTCCTAGAGGTTAGAGTAAAAAACCAAAAGGACCCGCTTCAGATCAGGGAGAAG
CCGTTCTATGGCAACGCTAAGTTCACCGAAGTGGATGTTGTATTACCCGAGAAGTTGGCAGTGAATGCAACACTT
AACCTTGTGGTGGAGACTATCCAGACTCATATGACAGACCCGTGGCCAGAATTTGCTAGTCAGACCGATCAACAG
GCATTGAGGTATACCACCGACCTCTATGTCATCAGCAGATACCCAACGTTGGTCCAGCGCACCAAAATCAAAGCT
CTGGTTCCCCGCATCATCTCCTATACAACTCCTACAAATGTAGATGCCTTTACAACGGGCAATGTGGTTGCGAAG
TCTGGTGCTGTCGTTACCTATGGTCCTTTCAGTAGTATCCCGGTTTCGACCAACAAGGACTTCCTCAAGACTTAC
CAGCAACCCGTTACCGTCCGTTATTACCACGAACAGCCCGTCTTAGAGGTAACAAGCTACAAGCGTGCTGTGGAA
ATTAGTCACTGGGGATCGAATATCAATACTGAGGATCAAGTTGTCTTGAAAAATGCCGGTCCCAAGCTGAAAGGC
CACTTTTCGCGTGTCGATTATCAAGGTCAACTTTACAAGGGCTCACAAGTACCTCATGTATTGCATTCCCTGTCT
CTCGACCTCCCGCCGGGCATCGACAACGTTTATTACTACGACCAAATCGGCAATGTCTCCACATCTAAGCTGAAT
GTTGCTCCGGCAGTCGCCAAGGGCGAGCCAGTCGTGAAGACAAGCTTGTTAAATATGAAGTTGAGGTACCCCCTG
ATGGGCGGTTGGAATTATACATTCACTGTGGGCTGGGATGCAGACTTGGCTGGTGTTGCCGGCTACAATTCGGCA
ACAGGAGAGTATAACGTTGAAATACCGATAATGACGACCATTCCCGGCGCTGTTGTAAACCAACACGAGCTCAAG
ATTGTGTTACCCGAAGGTGCAACTGACATCGAAGTCGTTACTCCCTACCCTTCTCTGACACTTTGGCTCGATAAA
CACACAGCCTACTTGGATACGATTGGTCGTCCAGCCATCATGTTCGAGTACAAAGATCTTACCCCTGCGCATGCA
AAGAATATCTATGTTCGCTATAAACTCAGCAGCGGGGACCATTTCAGAAAACCGGTGGCGGTATCCGCTGTTTTC
TTTGGGTTATTCTTCTTCACATTTGTTGTGAGGCGAATCGACCTAACAATCCCAAAAAAGCAAAAGGCGACATAG
Transcript >Agabi119p4|072910
ATGCCACTTGGTTGGCGAACGCTCCCTCAACTTCTCTTCGTCGCTCTCGCCTCTATCATCCACACATCATGCTCC
GCAGCGGCGGCGGAAACAGGCGTAGCTTTTGAGAACAGCGCGATCGTGCGCACAGTAGCGTTAGGTGGTTCAGTC
GTCCACGTCACGACGACAATCGCAATCAAGAGTCTGGCCGACGAGCAAGATATATACACAGTCTCATTTCCTCGC
AGGGAGAGGGACGCTTCGAGTTTCCTAGAGGTTAGAGTAAAAAACCAAAAGGACCCGCTTCAGATCAGGGAGAAG
CCGTTCTATGGCAACGCTAAGTTCACCGAAGTGGATGTTGTATTACCCGAGAAGTTGGCAGTGAATGCAACACTT
AACCTTGTGGTGGAGACTATCCAGACTCATATGACAGACCCGTGGCCAGAATTTGCTAGTCAGACCGATCAACAG
GCATTGAGGTATACCACCGACCTCTATGTCATCAGCAGATACCCAACGTTGGTCCAGCGCACCAAAATCAAAGCT
CTGGTTCCCCGCATCATCTCCTATACAACTCCTACAAATGTAGATGCCTTTACAACGGGCAATGTGGTTGCGAAG
TCTGGTGCTGTCGTTACCTATGGTCCTTTCAGTAGTATCCCGGTTTCGACCAACAAGGACTTCCTCAAGACTTAC
CAGCAACCCGTTACCGTCCGTTATTACCACGAACAGCCCGTCTTAGAGGTAACAAGCTACAAGCGTGCTGTGGAA
ATTAGTCACTGGGGATCGAATATCAATACTGAGGATCAAGTTGTCTTGAAAAATGCCGGTCCCAAGCTGAAAGGC
CACTTTTCGCGTGTCGATTATCAAGGTCAACTTTACAAGGGCTCACAAGTACCTCATGTATTGCATTCCCTGTCT
CTCGACCTCCCGCCGGGCATCGACAACGTTTATTACTACGACCAAATCGGCAATGTCTCCACATCTAAGCTGAAT
GTTGCTCCGGCAGTCGCCAAGGGCGAGCCAGTCGTGAAGACAAGCTTGTTAAATATGAAGTTGAGGTACCCCCTG
ATGGGCGGTTGGAATTATACATTCACTGTGGGCTGGGATGCAGACTTGGCTGGTGTTGCCGGCTACAATTCGGCA
ACAGGAGAGTATAACGTTGAAATACCGATAATGACGACCATTCCCGGCGCTGTTGTAAACCAACACGAGCTCAAG
ATTGTGTTACCCGAAGGTGCAACTGACATCGAAGTCGTTACTCCCTACCCTTCTCTGACACTTTGGCTCGATAAA
CACACAGCCTACTTGGATACGATTGGTCGTCCAGCCATCATGTTCGAGTACAAAGATCTTACCCCTGCGCATGCA
AAGAATATCTATGTTCGCTATAAACTCAGCAGCGGGGACCATTTCAGAAAACCGGTGGCGGTATCCGCTGTTTTC
TTTGGGTTATTCTTCTTCACATTTGTTGTGAGGCGAATCGACCTAACAATCCCAAAAAAGCAAAAGGCGACATAG
Gene >Agabi119p4|072910
ATGCCACTTGGTTGGCGAACGCTCCCTCAACTTCTCTTCGTCGCTCTCGCCTCTATCATCCACACATCATGCTCC
GCAGCGGCGGCGGAAACAGGCGTAGCTTTTGAGAACAGCGCGATCGTGCGCACAGTAGCGTTAGGTGGTTCAGTC
GTCCACGTCACGACGACAATCGCAATCAAGAGTCTGGCCGACGAGCAAGATATATACACAGTCTCATTTCCTCGC
AGGGAGAGGGACGCTTCGAGTTTCCTAGAGGTTAGAGTAAAAAACCAAAAGGACCCGCTTCAGATCAGGGAGAAG
CCGTTCTATGGCAACGCGTGAGTCTAGTTATTATACGATTAAATCTCCCTGACCCGACTTGAACTCGTCGACAGT
AAGTTCACCGAAGTGGATGTTGTATTACCCGAGAAGTTGGCAGTGAATGCAACACTTAACCTTGTGGTGGAGACT
ATCCAGACTCATATGACAGACCCGTGGCCAGAATTTGCTAGTCAGACCGATCAACAGGCATTGAGGTATACCACC
GACCTCTATGTCATCAGCAGATACCCAACGTTGGTCCAGCGCACCAAAATCAAGTGAGTTTATTACGCCCATATG
CGATGAAATTATTCACAGGACCAGAGCTCTGGTTCCCCGCATCATCTCCTATACAACTCCTACAAATGTAGATGC
CTTTACAACGGGCAATGTGGTTGCGAAGTCTGGTGCTGTCGTTACCTATGGTCCTTTCAGTAGTATCCCGGTTTC
GACCAACAAGGACTTCCTCAAGACTTACCAGCAACCCGTTACCGTCCGTTATTACCACGAACAGCCCGTCTTAGA
GGTAACAAGCTACAAGCGTGCTGTGGAAATTAGTCACTGGGGATCGAATATCAATACTGAGGATCAAGTTGTCTT
GAAAAATGCCGGTCCCAAGTACGTTCTTCCCTCCGCTTCAGGCCTGCGAGTTGGCTGACGCGATATTTTCCTAGG
CTGAAAGGCCACTTTTCGCGTGTCGATTATCAAGGTCAACTTTACAAGGGCTCACAAGTACCTCATGTATTGCAT
TCCCTGTCTCTCGACCTCCCGCCGGGCATCGACAACGTTTATTACTACGACCAAATCGGCAATGTCTCCACATCT
AAGCTGAATGTTGCTCCGGCAGTCGCCAAGGGCGAGCCAGTCGTGAAGACAAGCTTGTTAAATATGAAGTTGAGG
TACCCCCTGATGGGCGGTTGGAATTATACATTCACTGTGGGCTGGGATGCAGACTTGGCTGGTGTTGCCGGCTAC
AATTCGGCAACAGGAGAGTATAACGTTGAAATACCGATAATGACGACCATTCCCGGCGCTGTTGTAAACCAACAC
GAGCTCAAGATTGTGTTACCCGAAGGTGCAACGTAAGGAGGTTCTTTCCACGCTCAAGTAATTTTTGTTTATCTA
ACAAAACTGCATTATAGTGACATCGAAGTCGTTACTCCCTACCCTTCTCTGACACTTTGGCTCGATAAACACACA
GCCTACTTGGATACGATTGGTCGTCCAGCCATCATGTTCGAGTACAAAGATCTTACCCCTGCGCATGCAAAGAAT
ATCTATGTAAGTTGACACCACTCGTTGTCGTTTATCGTATCTCATTCGAAAAAAAAAGGTTCGCTATAAACTCAG
CAGCGGGGACCATTTCAGAAAACCGGTGGCGGTATCCGCTGTTTTCTTTGGGTTATTCTTCTTCACATTTGTTGT
GAGGCGAATCGACCTAACAATCCCAAAAAAGCAAAAGGCGACATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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