Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|072770
Gene name
Locationscaffold_04:1692808..1694206
Strand-
Gene length (bp)1398
Transcript length (bp)1023
Coding sequence length (bp)1023
Protein length (aa) 341

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13621 Cupin_8 Cupin-like domain 1.9E-64 41 310

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|P0C872|JMJD7_MOUSE JmjC domain-containing protein 7 OS=Mus musculus GN=Jmjd7 PE=1 SV=1 13 327 1.0E-46
sp|P0C870|JMJD7_HUMAN JmjC domain-containing protein 7 OS=Homo sapiens GN=JMJD7 PE=1 SV=1 31 327 2.0E-43
sp|Q54CS7|JMJCE_DICDI JmjC domain-containing protein E OS=Dictyostelium discoideum GN=jcdE PE=3 SV=2 36 322 1.0E-36
sp|Q4IER0|TYW4_GIBZE tRNA wybutosine-synthesizing protein 4 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PPM2 PE=3 SV=1 39 309 6.0E-11
sp|Q54FM1|JMJCA_DICDI JmjC domain-containing protein A OS=Dictyostelium discoideum GN=jcdA PE=2 SV=1 51 305 1.0E-10
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P0C872|JMJD7_MOUSE JmjC domain-containing protein 7 OS=Mus musculus GN=Jmjd7 PE=1 SV=1 13 327 1.0E-46
sp|P0C870|JMJD7_HUMAN JmjC domain-containing protein 7 OS=Homo sapiens GN=JMJD7 PE=1 SV=1 31 327 2.0E-43
sp|Q54CS7|JMJCE_DICDI JmjC domain-containing protein E OS=Dictyostelium discoideum GN=jcdE PE=3 SV=2 36 322 1.0E-36
sp|Q4IER0|TYW4_GIBZE tRNA wybutosine-synthesizing protein 4 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PPM2 PE=3 SV=1 39 309 6.0E-11
sp|Q54FM1|JMJCA_DICDI JmjC domain-containing protein A OS=Dictyostelium discoideum GN=jcdA PE=2 SV=1 51 305 1.0E-10
sp|Q9VD28|JMJD6_DROME Bifunctional arginine demethylase and lysyl-hydroxylase PSR OS=Drosophila melanogaster GN=PSR PE=2 SV=1 36 303 5.0E-10
sp|Q8RWR1|JMJ30_ARATH Putative lysine-specific demethylase JMJD5 OS=Arabidopsis thaliana GN=JMJD5 PE=2 SV=1 157 309 1.0E-09
sp|Q2U6D4|TYW4_ASPOR tRNA wybutosine-synthesizing protein 4 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=ppm2 PE=3 SV=2 42 312 2.0E-09
sp|Q1JP61|KDM8_BOVIN Lysine-specific demethylase 8 OS=Bos taurus GN=KDM8 PE=2 SV=1 50 306 3.0E-08
sp|Q8N371|KDM8_HUMAN Lysine-specific demethylase 8 OS=Homo sapiens GN=KDM8 PE=1 SV=1 50 306 4.0E-08
sp|Q6GND3|JMD6A_XENLA Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-A OS=Xenopus laevis GN=jmjd6-a PE=2 SV=1 51 292 8.0E-08
sp|B5XF11|KDM8_SALSA Lysine-specific demethylase 8 OS=Salmo salar GN=kdm8 PE=2 SV=1 141 306 1.0E-07
sp|Q9CXT6|KDM8_MOUSE Lysine-specific demethylase 8 OS=Mus musculus GN=Kdm8 PE=2 SV=1 34 306 2.0E-07
sp|Q497B8|KDM8_RAT Lysine-specific demethylase 8 OS=Rattus norvegicus GN=Kdm8 PE=2 SV=1 34 306 4.0E-07
sp|Q7ZX37|JMD6B_XENLA Bifunctional arginine demethylase and lysyl-hydroxylase JMJD6-B OS=Xenopus laevis GN=jmjd6-b PE=2 SV=1 51 292 7.0E-07
[Show less]

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 46 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|072770
MTQQPHYVNKLKRKLAQWISDEYRDLNGNHIQILDQPPSSLEFSRLLHIARPVIIKGFDIPATRKWTNEYLVQKM
DDQQISVAITPNGRADAITRGADNELYFVEPQIEQMTIQNLVSKLVGQDAPSDIHYLQSQNGNLYSSDYFTDGNS
VSEYEHLREDVPDEVPWCTEALGRRPDAVNLWIGEGKSTTSIHSDPYENIYTVVKGEKRFTLLPPSDGWCLKERF
YPHAKFGRSSSSQPLEVIPSTDVPPVRWSSITDPSIPGSLPANIKPLHVCLKRGETLYLPAGWWHYVQQGKEMTI
AINWWYDMEMRGVHWVFLNLLRNEEGLYIDSEDRESDPDS*
Coding >Agabi119p4|072770
ATGACACAACAACCACATTATGTCAACAAGCTCAAGAGAAAACTCGCGCAATGGATTTCGGATGAGTACAGAGAT
CTGAATGGAAATCATATTCAGATACTAGATCAGCCACCAAGTTCACTCGAGTTTTCACGTCTCCTTCATATCGCA
CGACCTGTCATTATCAAAGGCTTTGATATCCCAGCCACACGAAAATGGACCAATGAATACCTCGTGCAAAAAATG
GATGACCAACAAATCTCCGTCGCCATCACACCCAACGGACGCGCCGATGCAATCACTCGAGGAGCAGACAATGAG
TTATACTTTGTCGAGCCTCAGATCGAACAGATGACTATACAGAATCTAGTATCAAAACTAGTTGGTCAAGATGCC
CCTTCAGACATTCATTACCTTCAGTCGCAAAACGGTAATTTGTATTCTTCGGATTACTTCACAGACGGTAATTCC
GTTTCGGAGTATGAACATTTAAGGGAAGACGTTCCGGATGAGGTCCCGTGGTGCACTGAAGCTCTTGGTCGTAGG
CCAGACGCTGTCAATTTGTGGATTGGCGAGGGGAAAAGTACGACTAGCATACACAGTGATCCCTATGAAAATATC
TATACAGTTGTGAAGGGAGAGAAACGTTTCACTTTGTTACCGCCTTCAGATGGCTGGTGTTTGAAAGAACGATTT
TATCCTCACGCCAAGTTTGGAAGATCTTCTTCATCACAACCTCTGGAAGTAATACCCTCGACAGATGTACCACCA
GTACGTTGGTCCTCTATCACGGACCCAAGTATACCGGGAAGTCTTCCAGCAAACATAAAACCCCTCCATGTTTGT
CTCAAACGGGGTGAAACGCTTTACCTCCCGGCAGGCTGGTGGCATTATGTCCAACAGGGAAAGGAGATGACGATC
GCTATCAATTGGTGGTACGACATGGAGATGCGTGGGGTACATTGGGTGTTTTTGAATCTCCTGAGGAACGAGGAA
GGCCTTTACATTGATAGCGAAGATAGGGAGTCGGATCCTGACAGTTGA
Transcript >Agabi119p4|072770
ATGACACAACAACCACATTATGTCAACAAGCTCAAGAGAAAACTCGCGCAATGGATTTCGGATGAGTACAGAGAT
CTGAATGGAAATCATATTCAGATACTAGATCAGCCACCAAGTTCACTCGAGTTTTCACGTCTCCTTCATATCGCA
CGACCTGTCATTATCAAAGGCTTTGATATCCCAGCCACACGAAAATGGACCAATGAATACCTCGTGCAAAAAATG
GATGACCAACAAATCTCCGTCGCCATCACACCCAACGGACGCGCCGATGCAATCACTCGAGGAGCAGACAATGAG
TTATACTTTGTCGAGCCTCAGATCGAACAGATGACTATACAGAATCTAGTATCAAAACTAGTTGGTCAAGATGCC
CCTTCAGACATTCATTACCTTCAGTCGCAAAACGGTAATTTGTATTCTTCGGATTACTTCACAGACGGTAATTCC
GTTTCGGAGTATGAACATTTAAGGGAAGACGTTCCGGATGAGGTCCCGTGGTGCACTGAAGCTCTTGGTCGTAGG
CCAGACGCTGTCAATTTGTGGATTGGCGAGGGGAAAAGTACGACTAGCATACACAGTGATCCCTATGAAAATATC
TATACAGTTGTGAAGGGAGAGAAACGTTTCACTTTGTTACCGCCTTCAGATGGCTGGTGTTTGAAAGAACGATTT
TATCCTCACGCCAAGTTTGGAAGATCTTCTTCATCACAACCTCTGGAAGTAATACCCTCGACAGATGTACCACCA
GTACGTTGGTCCTCTATCACGGACCCAAGTATACCGGGAAGTCTTCCAGCAAACATAAAACCCCTCCATGTTTGT
CTCAAACGGGGTGAAACGCTTTACCTCCCGGCAGGCTGGTGGCATTATGTCCAACAGGGAAAGGAGATGACGATC
GCTATCAATTGGTGGTACGACATGGAGATGCGTGGGGTACATTGGGTGTTTTTGAATCTCCTGAGGAACGAGGAA
GGCCTTTACATTGATAGCGAAGATAGGGAGTCGGATCCTGACAGTTGA
Gene >Agabi119p4|072770
ATGACACAACAACCACATTATGTCAACAAGCTCAAGAGAAAACTCGCGCAATGGATTTCGGATGAGTACAGAGGT
TGTATATTCACCTCTTAACTAACGTCCCTCTCGCTCATGTGATACCTTAGATCTGAATGGAAATCATATTCAGAT
ACTAGATCAGCCACCAAGTTCACTCGAGTTTTCACGTCTCCTTCATATCGCACGACCTGTCATTATCAAAGGTGC
GCAGCTTGTTGTTCTTTAGAAAACACCGTAATTAAATCTTGTACCTTGAGGCTTTGATATCCCAGCCACACGAAA
ATGGACCAATGAATACCTCGTGCAAAAAATGGATGACCAACAAATCTCCGTCGCCATCACACCCAACGGGTCAGC
TTGCGCCAATATTGACTACAGGACTCTCGACGGGAATGACATTTTAGACGCGCCGATGCAATCACTCGAGGAGCA
GACAATGAGTTATACTTTGTCGAGCCTCAGATCGAACAGATGACTATACAGAATCTAGTATCAAAACTAGTTGGT
CAAGGTAAGATGTATGATCCTTTGTTTAATGACCCCGAGTTAAATGACTTTAGATGCCCCTTCAGACATTCATTA
CCTTCAGTCGCAAAACGGTAATTTGTATTCTTCGGATTACTTCACAGACGGTAATTCCGTTTCGGAGTATGAACA
TTTAAGGGAAGACGTTCCGGATGAGGTCCCGTGGTGCACTGAAGCTCTTGGTTAGTTCACTATTTGGCATAAAGT
TGCCAATGTATGTTTGAACTTTATTGCAGGTCGTAGGCCAGACGCTGTCAATTTGTGGATTGGCGAGGGGAAAAG
TACGACTAGCATACACAGTGGTGGGTGCTTTGTGAAAACCGCTTCGCAGTCGAAAATGATTTCTAATCACAAGTA
TAGATCCCTATGAAAATATCTATACAGTTGTGAAGGGAGAGAAACGTTTCACTTTGTTACCGCCTTCAGATGGCT
GGTGTTTGAAAGGTCGGGTTCCCTTGCAAAACACTATCCGCGGTTGTTCATGAACGCCGTGCCATAGAACGATTT
TATCCTCACGCCAAGTTTGGAAGATCTTCTTCATCACAACCTCTGGAAGTAATACCCTCGACAGATGTACCACCA
GTACGTTGGTCCTCTATCACGGACCCAAGTATACCGGGAAGTCTTCCAGCAAACATAAAACCCCTCCATGTTTGT
CTCAAACGGGGTGAAACGCTTTACCTCCCGGCAGGCTGGTGGCATTATGTCCAACAGGGAAAGGAGATGACGATC
GCTATCAATTGGTGGTACGACATGGAGATGCGTGGGGTACATTGGGTGTTTTTGAATCTCCTGAGGAACGAGGAA
GGCCTTTACATTGATAGCGAAGATAGGGAGTCGGATCCTGACAGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail