Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|072450
Gene name
Locationscaffold_04:1618680..1621412
Strand+
Gene length (bp)2732
Transcript length (bp)2463
Coding sequence length (bp)2463
Protein length (aa) 821

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 1.1E-16 231 462
PF00172 Zn_clus Fungal Zn(2)-Cys(6) binuclear cluster domain 1.1E-04 57 83

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P87000|ACU15_NEUCR Transcriptional activator protein acu-15 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=acu-15 PE=1 SV=2 48 556 2.0E-14
sp|O59741|YN25_SCHPO Uncharacterized transcriptional regulatory protein C530.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC530.05 PE=3 SV=2 30 526 1.0E-08
sp|O14130|YF54_SCHPO Uncharacterized transcriptional regulatory protein C3C7.04 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC3C7.04 PE=3 SV=1 218 508 1.0E-07
sp|O60130|YH7G_SCHPO Putative transcriptional regulatory protein C16G5.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC16G5.16 PE=1 SV=1 217 557 1.0E-07
sp|C5DUX2|OAF3_ZYGRC Oleate activated transcription factor 3 OS=Zygosaccharomyces rouxii (strain ATCC 2623 / CBS 732 / NBRC 1130 / NCYC 568 / NRRL Y-229) GN=OAF3 PE=3 SV=1 40 184 7.0E-06

GO

GO Term Description Terminal node
GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific Yes
GO:0006355 regulation of transcription, DNA-templated Yes
GO:0008270 zinc ion binding Yes
GO:0003677 DNA binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0065007 biological regulation No
GO:0019222 regulation of metabolic process No
GO:0006807 nitrogen compound metabolic process No
GO:0009059 macromolecule biosynthetic process No
GO:1901576 organic substance biosynthetic process No
GO:0005488 binding No
GO:0009889 regulation of biosynthetic process No
GO:0140110 transcription regulator activity No
GO:0044238 primary metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:1901360 organic cyclic compound metabolic process No
GO:0046872 metal ion binding No
GO:0006725 cellular aromatic compound metabolic process No
GO:0019219 regulation of nucleobase-containing compound metabolic process No
GO:0031326 regulation of cellular biosynthetic process No
GO:0090304 nucleic acid metabolic process No
GO:0060255 regulation of macromolecule metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0003676 nucleic acid binding No
GO:0031323 regulation of cellular metabolic process No
GO:0097659 nucleic acid-templated transcription No
GO:0044249 cellular biosynthetic process No
GO:0008152 metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0003674 molecular_function No
GO:0018130 heterocycle biosynthetic process No
GO:0080090 regulation of primary metabolic process No
GO:0010468 regulation of gene expression No
GO:0008150 biological_process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0010556 regulation of macromolecule biosynthetic process No
GO:0046914 transition metal ion binding No
GO:0051171 regulation of nitrogen compound metabolic process No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0050789 regulation of biological process No
GO:0043170 macromolecule metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0043167 ion binding No
GO:0044237 cellular metabolic process No
GO:0003700 DNA-binding transcription factor activity No
GO:0019438 aromatic compound biosynthetic process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0050794 regulation of cellular process No
GO:0016070 RNA metabolic process No
GO:0009987 cellular process No
GO:0051252 regulation of RNA metabolic process No
GO:2001141 regulation of RNA biosynthetic process No
GO:0009058 biosynthetic process No
GO:0097159 organic cyclic compound binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0043169 cation binding No
GO:1903506 regulation of nucleic acid-templated transcription No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 46 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|072450
MTDDHSSVVSPTSARQKPSRSITSGTVRPRHSPPPGSAEQNADGRPPTKRARKAINCEPCRNSKLKCDRNRPCSS
CVLRGTSAMCYQDGKGHEGEIGRGDDHQYTRIDPAQELSRIRHSLSLVEAYIYPHHRASLPRRTTDVPSVITPKK
ELLEIDPKASSQGVVGTQTSGGFFAGPTSAVTHFLLDDAKEFEDTENRYSSQERVEEFGPAQYDRDLLAMLPPID
VIDGLINFYFEHCNWIYRHINQPSFTQQWERFKSGSSSDRIVLATACAMMALATQYLPAQHQLLEGFAESTEEIG
FKFWEISGMSLQRRLAESRSYTLELVELLLCRCHFLTMHKNDSEEIWSMRGDLVAIAMAMGLHRDPSKWRKRWDQ
QTTERRRWAWWHILLLERWQAFIFGRPLAFASHHFDTQLPSFCDPALDKSGRLYLPNIALFRLASILGDIVDDAL
SVRAVPYENVQANDRALVQWMENLPPELDLDEYRVARSLASPNIAVRRLGVQSIIIRTSYYHIRFTLHRPYASPN
IDSLTATGKPSNLDANKTAQSLEIAVSAAEKLITMVGQSRPDIIANVSLAVPAHMNWGPFHCFSAAMFFSFQLIA
SPDQPGAGLFRASIRKAMSTLEQCRGGAVADKAFNILQTLGPLYSPEFSQEASEAREQVRTQVFSRIAKLAFPYH
DSGSKRRNQESPNGRGMDSPTTSTSVSPPLNGVPPQYESLQPHIESATRQSATVYPHGSITGHMDSSGVLIQPNV
ESVYQTQGYTTSAQPIYDTRGYNQYNVHAIDDSTLWGPTSGFGQEWAQILLRPEVTGSSLPPNGRHMPAS*
Coding >Agabi119p4|072450
ATGACCGACGACCACTCCTCCGTCGTTTCCCCAACATCGGCAAGGCAAAAGCCCAGCAGATCAATAACCTCGGGC
ACCGTGCGTCCCAGACATTCTCCTCCCCCAGGCTCTGCAGAGCAGAACGCCGATGGACGGCCGCCCACAAAGCGT
GCGCGCAAGGCCATCAACTGTGAACCATGTCGAAATAGCAAGCTGAAATGCGACAGAAACCGACCCTGTTCGTCC
TGTGTACTGCGGGGCACCTCGGCAATGTGCTATCAGGATGGAAAAGGCCACGAGGGAGAAATTGGCCGCGGAGAC
GACCATCAATATACCCGTATCGATCCTGCGCAAGAGCTATCCAGAATCCGCCATTCTCTCTCTCTTGTCGAAGCA
TATATATACCCCCACCATCGCGCGTCCCTTCCCCGCCGCACTACAGATGTTCCCAGTGTCATCACGCCTAAAAAA
GAGCTACTTGAGATTGATCCAAAAGCCTCATCTCAAGGAGTGGTAGGAACGCAAACTTCTGGAGGGTTCTTTGCT
GGCCCAACGAGCGCTGTTACTCACTTTCTGCTGGATGACGCCAAAGAGTTCGAAGACACCGAAAATCGATACTCA
AGTCAAGAGCGTGTAGAGGAATTCGGCCCAGCTCAATATGATCGCGATTTACTTGCCATGCTCCCGCCAATAGAT
GTCATCGACGGTCTCATCAACTTTTATTTTGAGCATTGCAATTGGATATACCGTCATATCAACCAGCCATCTTTC
ACTCAGCAATGGGAGCGTTTCAAAAGTGGGAGTTCATCTGACCGTATAGTGCTTGCCACTGCTTGTGCTATGATG
GCATTAGCGACGCAGTACCTGCCAGCCCAACATCAGCTCCTTGAGGGTTTCGCTGAATCCACCGAAGAAATTGGC
TTCAAATTTTGGGAAATTTCTGGGATGTCTCTACAAAGGCGGCTGGCTGAATCACGATCGTATACTCTTGAGCTG
GTGGAACTGCTTTTGTGTCGCTGTCATTTCCTGACAATGCACAAAAATGACAGTGAAGAGATATGGTCTATGAGG
GGTGATCTCGTCGCCATTGCGATGGCAATGGGCCTCCACCGTGATCCTTCTAAGTGGAGAAAACGCTGGGATCAG
CAGACGACGGAAAGGCGTCGTTGGGCTTGGTGGCATATATTGCTATTAGAGCGCTGGCAAGCTTTCATATTCGGC
AGGCCGCTAGCGTTCGCATCACATCATTTTGACACGCAACTGCCATCATTTTGCGATCCCGCACTCGATAAAAGT
GGACGTTTGTACTTGCCGAACATCGCTCTCTTTCGTCTTGCTTCCATTCTTGGTGACATCGTTGACGATGCTCTC
TCAGTACGGGCAGTACCCTACGAAAATGTACAAGCCAACGATCGTGCCTTGGTCCAATGGATGGAAAACTTACCA
CCTGAACTTGACCTTGATGAATACCGTGTAGCACGGAGTTTGGCATCTCCCAATATAGCTGTACGCCGTCTCGGC
GTTCAGAGTATAATCATTCGCACTTCTTATTATCATATCCGTTTTACCCTCCATCGCCCTTACGCCAGCCCCAAC
ATCGATAGCCTTACTGCAACAGGCAAGCCCTCCAACCTCGATGCCAATAAAACCGCCCAAAGTCTTGAGATAGCG
GTTAGTGCTGCAGAAAAGCTGATCACTATGGTTGGCCAGTCACGCCCAGACATCATTGCAAACGTCTCCTTGGCA
GTGCCCGCACATATGAACTGGGGTCCTTTCCACTGTTTTTCTGCGGCCATGTTCTTTTCCTTCCAACTCATAGCA
AGTCCTGACCAACCTGGCGCAGGTCTCTTCCGTGCTAGCATACGGAAGGCCATGTCCACACTCGAGCAATGCAGG
GGCGGTGCTGTTGCTGACAAAGCGTTCAATATCTTACAGACTCTTGGACCCCTTTACTCCCCTGAATTTTCGCAG
GAAGCTTCTGAAGCTCGAGAGCAGGTACGAACACAAGTATTTAGTCGTATCGCCAAACTGGCATTCCCGTATCAT
GATTCTGGCAGTAAACGCCGAAACCAAGAATCACCGAATGGACGGGGGATGGATTCACCCACGACTTCGACTTCA
GTTAGTCCCCCACTCAACGGCGTACCTCCTCAGTACGAGTCCCTCCAACCCCATATCGAGTCCGCTACGAGACAA
TCGGCCACTGTGTACCCTCATGGTTCAATCACCGGCCACATGGACTCCTCAGGAGTCCTGATTCAGCCTAATGTC
GAATCGGTTTATCAGACCCAAGGGTATACAACATCGGCGCAGCCTATATATGATACACGAGGGTATAATCAATAC
AATGTCCATGCAATTGATGACTCAACTTTGTGGGGGCCAACTTCTGGTTTTGGGCAAGAATGGGCTCAGATCTTA
CTCCGTCCAGAGGTGACGGGTTCATCATTACCGCCGAATGGTCGACATATGCCAGCGTCATAG
Transcript >Agabi119p4|072450
ATGACCGACGACCACTCCTCCGTCGTTTCCCCAACATCGGCAAGGCAAAAGCCCAGCAGATCAATAACCTCGGGC
ACCGTGCGTCCCAGACATTCTCCTCCCCCAGGCTCTGCAGAGCAGAACGCCGATGGACGGCCGCCCACAAAGCGT
GCGCGCAAGGCCATCAACTGTGAACCATGTCGAAATAGCAAGCTGAAATGCGACAGAAACCGACCCTGTTCGTCC
TGTGTACTGCGGGGCACCTCGGCAATGTGCTATCAGGATGGAAAAGGCCACGAGGGAGAAATTGGCCGCGGAGAC
GACCATCAATATACCCGTATCGATCCTGCGCAAGAGCTATCCAGAATCCGCCATTCTCTCTCTCTTGTCGAAGCA
TATATATACCCCCACCATCGCGCGTCCCTTCCCCGCCGCACTACAGATGTTCCCAGTGTCATCACGCCTAAAAAA
GAGCTACTTGAGATTGATCCAAAAGCCTCATCTCAAGGAGTGGTAGGAACGCAAACTTCTGGAGGGTTCTTTGCT
GGCCCAACGAGCGCTGTTACTCACTTTCTGCTGGATGACGCCAAAGAGTTCGAAGACACCGAAAATCGATACTCA
AGTCAAGAGCGTGTAGAGGAATTCGGCCCAGCTCAATATGATCGCGATTTACTTGCCATGCTCCCGCCAATAGAT
GTCATCGACGGTCTCATCAACTTTTATTTTGAGCATTGCAATTGGATATACCGTCATATCAACCAGCCATCTTTC
ACTCAGCAATGGGAGCGTTTCAAAAGTGGGAGTTCATCTGACCGTATAGTGCTTGCCACTGCTTGTGCTATGATG
GCATTAGCGACGCAGTACCTGCCAGCCCAACATCAGCTCCTTGAGGGTTTCGCTGAATCCACCGAAGAAATTGGC
TTCAAATTTTGGGAAATTTCTGGGATGTCTCTACAAAGGCGGCTGGCTGAATCACGATCGTATACTCTTGAGCTG
GTGGAACTGCTTTTGTGTCGCTGTCATTTCCTGACAATGCACAAAAATGACAGTGAAGAGATATGGTCTATGAGG
GGTGATCTCGTCGCCATTGCGATGGCAATGGGCCTCCACCGTGATCCTTCTAAGTGGAGAAAACGCTGGGATCAG
CAGACGACGGAAAGGCGTCGTTGGGCTTGGTGGCATATATTGCTATTAGAGCGCTGGCAAGCTTTCATATTCGGC
AGGCCGCTAGCGTTCGCATCACATCATTTTGACACGCAACTGCCATCATTTTGCGATCCCGCACTCGATAAAAGT
GGACGTTTGTACTTGCCGAACATCGCTCTCTTTCGTCTTGCTTCCATTCTTGGTGACATCGTTGACGATGCTCTC
TCAGTACGGGCAGTACCCTACGAAAATGTACAAGCCAACGATCGTGCCTTGGTCCAATGGATGGAAAACTTACCA
CCTGAACTTGACCTTGATGAATACCGTGTAGCACGGAGTTTGGCATCTCCCAATATAGCTGTACGCCGTCTCGGC
GTTCAGAGTATAATCATTCGCACTTCTTATTATCATATCCGTTTTACCCTCCATCGCCCTTACGCCAGCCCCAAC
ATCGATAGCCTTACTGCAACAGGCAAGCCCTCCAACCTCGATGCCAATAAAACCGCCCAAAGTCTTGAGATAGCG
GTTAGTGCTGCAGAAAAGCTGATCACTATGGTTGGCCAGTCACGCCCAGACATCATTGCAAACGTCTCCTTGGCA
GTGCCCGCACATATGAACTGGGGTCCTTTCCACTGTTTTTCTGCGGCCATGTTCTTTTCCTTCCAACTCATAGCA
AGTCCTGACCAACCTGGCGCAGGTCTCTTCCGTGCTAGCATACGGAAGGCCATGTCCACACTCGAGCAATGCAGG
GGCGGTGCTGTTGCTGACAAAGCGTTCAATATCTTACAGACTCTTGGACCCCTTTACTCCCCTGAATTTTCGCAG
GAAGCTTCTGAAGCTCGAGAGCAGGTACGAACACAAGTATTTAGTCGTATCGCCAAACTGGCATTCCCGTATCAT
GATTCTGGCAGTAAACGCCGAAACCAAGAATCACCGAATGGACGGGGGATGGATTCACCCACGACTTCGACTTCA
GTTAGTCCCCCACTCAACGGCGTACCTCCTCAGTACGAGTCCCTCCAACCCCATATCGAGTCCGCTACGAGACAA
TCGGCCACTGTGTACCCTCATGGTTCAATCACCGGCCACATGGACTCCTCAGGAGTCCTGATTCAGCCTAATGTC
GAATCGGTTTATCAGACCCAAGGGTATACAACATCGGCGCAGCCTATATATGATACACGAGGGTATAATCAATAC
AATGTCCATGCAATTGATGACTCAACTTTGTGGGGGCCAACTTCTGGTTTTGGGCAAGAATGGGCTCAGATCTTA
CTCCGTCCAGAGGTGACGGGTTCATCATTACCGCCGAATGGTCGACATATGCCAGCGTCATAG
Gene >Agabi119p4|072450
ATGACCGACGACCACTCCTCCGTCGTTTCCCCAACATCGGCAAGGCAAAAGCCCAGCAGATCAATAACCTCGGGC
ACCGTGCGTCCCAGACATTCTCCTCCCCCAGGCTCTGCAGAGCAGAACGCCGATGGACGGCCGCCCACAAAGCGT
GCGCGCAAGGCCATCAACTGTGAACCATGTCGAAATAGCAAGCTGAAATGCGACAGGTAGCCGTTACACAAGCTT
TTCCTCCGTCCTTTCCTCACCATATCTGTGTATAGAAACCGACCCTGTTCGTCCTGTGTACTGCGGGGTAAGTAC
CTGATGGACGCCGCACAATCGCTATGCTCAATGTAGCTTCAAGGCACCTCGGCAATGTGCTATCAGGATGGAAAA
GGCCACGAGGGAGAAATTGGCCGCGGAGACGACCATCAGTGGGTTTCCTGCTTCACTCTTCATCCCAACAAAACT
TATTTTCTCGCAAGATATACCCGTATCGATCCTGCGCAAGAGCTATCCAGAATCCGCCATTCTCTCTCTCTTGTC
GAAGCATATATATACCCCCACCATCGCGCGTCCCTTCCCCGCCGCACTACAGATGTTCCCAGTGTCATCACGCCT
AAAAAAGAGCTACTTGAGATTGATCCAAAAGCCTCATCTCAAGGAGTGGTAGGAACGCAAACTTCTGGAGGGTTC
TTTGCTGGCCCAACGAGCGCTGTTACTCACTTTCTGCTGGTATATTTCCTTGATACATGAGTTTGTATGCGCCTC
ACGAACTTCTTCAGGATGACGCCAAAGAGTTCGAAGACACCGAAAATCGATACTCAAGTCAAGAGCGTGTAGAGG
AATTCGGCCCAGCTCAATATGATCGCGATTTACTTGCCATGCTCCCGCCAATAGATGTCATCGACGGTCTCATCA
ACTTTTATTTTGAGCATTGCAATTGGATATACCGTCATATCAACCAGCCATCTTTCACTCAGCAATGGGAGCGTT
TCAAAAGTGGGAGTTCATCTGACCGTATAGTGCTTGCCACTGCTTGTGCTATGATGGCATTAGCGACGCAGTACC
TGCCAGCCCAACATCAGCTCCTTGAGGGTTTCGCTGAATCCACCGAAGAAATTGGCTTCAAATTTTGGGAAATTT
CTGGGATGTCTCTACAAAGGCGGCTGGCTGAATCACGATCGTATACTCTTGAGCTGGTGGAACTGCTTTTGTGTC
GCTGTCATTTCCTGACAATGCACAAAAATGACAGTGAAGAGATATGGTCTATGAGGGGTGATCTCGTCGCCATTG
CGATGGCAATGGGCCTCCACCGTGATCCTTCTAAGTGGAGAAAACGCTGGGATCAGCAGACGACGGAAAGGCGTC
GTTGGGCTTGGTGGCATATATTGCTATTAGAGCGGTAAGCATTGATTTCGGTTGCTTTGTCATTGTCTGATACAC
CTCATATTAATGGAATCTGCAGCTGGCAAGCTTTCATATTCGGCAGGCCGCTAGCGTTCGCATCACATCATTTTG
ACACGCAACTGCCATCATTTTGCGATCCCGCACTCGATAAAAGTGGACGTTTGTACTTGCCGAACATCGCTCTCT
TTCGTCTTGCTTCCATTCTTGGTGACATCGTTGACGATGCTCTCTCAGTACGGGCAGTACCCTACGAAAATGTAC
AAGCCAACGATCGTGCCTTGGTCCAATGGATGGAAAACTTACCACCTGAACTTGACCTTGATGAATACCGTGTAG
CACGGAGTTTGGCATCTCCCAATATAGCTGTACGCCGTCTCGGCGTTCAGAGTATAATCATTCGCACTTCTTATT
ATCATATCCGTTTTACCCTCCATCGCCCTTACGCCAGCCCCAACATCGATAGCCTTACTGCAACAGGCAAGCCCT
CCAACCTCGATGCCAATAAAACCGCCCAAAGTCTTGAGATAGCGGTTAGTGCTGCAGAAAAGCTGATCACTATGG
TTGGCCAGTCACGCCCAGACATCATTGCAAACGTCTCCTTGGCAGTGCCCGCACATATGAACTGGGGTCCTTTCC
ACTGTTTTTCTGCGGCCATGTTCTTTTCCTTCCAACTCATAGCAAGTCCTGACCAACCTGGCGCAGGTCTCTTCC
GTGCTAGCATACGGAAGGCCATGTCCACACTCGAGCAATGCAGGGGCGGTGCTGTTGCTGACAAAGCGTTCAATA
TCTTACAGACTCTTGGACCCCTTTACTCCCCTGAATTTTCGCAGGAAGCTTCTGAAGCTCGAGAGCAGGTACGAA
CACAAGTATTTAGTCGTATCGCCAAACTGGCATTCCCGTATCATGATTCTGGCAGTAAACGCCGAAACCAAGAAT
CACCGAATGGACGGGGGATGGATTCACCCACGACTTCGACTTCAGTTAGTCCCCCACTCAACGGCGTACCTCCTC
AGTACGAGTCCCTCCAACCCCATATCGAGTCCGCTACGAGACAATCGGCCACTGTGTACCCTCATGGTTCAATCA
CCGGCCACATGGACTCCTCAGGAGTCCTGATTCAGCCTAATGTCGAATCGGTTTATCAGACCCAAGGGTATACAA
CATCGGCGCAGCCTATATATGATACACGAGGGTATAATCAATACAATGTCCATGCAATTGATGACTCAACTTTGT
GGGGGCCAACTTCTGGTTTTGGGCAAGAATGGGCTCAGATCTTACTCCGTCCAGAGGTGACGGGTTCATCATTAC
CGCCGAATGGTCGACATATGCCAGCGTCATAG

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