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| Protein ID | Agabi119p4|072090 |
| Gene name | |
| Location | scaffold_04:1541206..1542451 |
| Strand | + |
| Gene length (bp) | 1245 |
| Transcript length (bp) | 1026 |
| Coding sequence length (bp) | 1026 |
| Protein length (aa) | 342 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF11790 | Glyco_hydro_cc | Glycosyl hydrolase catalytic core | 4.2E-64 | 105 | 338 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q09788|ASL1_SCHPO | Alkali-sensitive linkage protein 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=asl1 PE=1 SV=1 | 167 | 339 | 1.0E-23 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 29 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|072090 MAVTKLLNLLAISCLAIIASFGPVPVSALSVESVHHARRDHHVLAAKKRGNSSKRCKPRSTTPAPSPSPTTSKKP APKPTSSKDVAPPSPTPPSGGGDSGARKVGIAFTGGDESAITQFWSWKTQFYYTWSPWCIDAADKVGFQCCRMLW GFKQIDDFTKNARPGHGNCAMGPNEPNEPSQSNMSPQDAAGLWKQYLEPLHDNGYTLISPACTNAPSGKTWMQDF FKACDGCHVDRLAVHFYGTDAQDLIDYVEDMHATFGKQVWVTEFACQDFSGGQQSNQQQVTEFMQKVTAYMDHTD KVGQYFAFGALTNMGNVNPKNQLLNPSGSGLTSLGKLYIGE* |
| Coding | >Agabi119p4|072090 ATGGCAGTCACCAAATTACTCAACCTCCTCGCCATTTCCTGCCTTGCCATCATCGCATCTTTCGGCCCTGTCCCG GTTTCAGCCCTCTCCGTTGAATCGGTCCACCATGCGCGTCGCGATCACCACGTTTTAGCTGCAAAGAAACGTGGT AATTCTTCCAAGCGATGCAAGCCCCGTTCCACCACCCCTGCACCCAGCCCTTCCCCTACCACTTCGAAGAAGCCG GCACCCAAGCCCACTTCGTCCAAAGATGTTGCTCCCCCTAGCCCGACCCCACCTAGTGGCGGTGGAGACAGTGGC GCTCGCAAAGTCGGTATTGCTTTTACAGGGGGCGATGAGAGTGCTATCACACAATTCTGGTCCTGGAAAACTCAA TTTTATTACACTTGGAGCCCCTGGTGCATTGATGCCGCTGACAAAGTCGGCTTCCAATGCTGTCGCATGTTGTGG GGCTTCAAGCAGATCGACGACTTCACCAAGAATGCTCGGCCTGGTCATGGCAATTGTGCCATGGGTCCGAATGAG CCCAACGAACCCAGCCAATCCAATATGAGTCCTCAAGACGCCGCTGGCCTCTGGAAACAATACCTAGAACCTCTT CATGATAATGGATACACTCTGATTAGCCCTGCTTGTACGAATGCTCCTTCCGGCAAGACTTGGATGCAAGACTTC TTCAAGGCCTGTGATGGCTGTCACGTCGATCGTCTGGCGGTACACTTCTACGGGACTGATGCGCAGGATCTTATT GACTATGTCGAAGACATGCATGCCACCTTCGGCAAACAGGTTTGGGTTACCGAGTTTGCCTGCCAAGACTTCTCT GGTGGTCAACAAAGTAATCAGCAACAGGTCACTGAATTCATGCAGAAAGTCACTGCGTACATGGATCACACCGAT AAAGTCGGCCAATACTTCGCGTTTGGTGCCTTAACAAACATGGGCAACGTGAACCCGAAAAATCAGTTATTGAAT CCTAGTGGCAGCGGACTCACGTCCCTTGGTAAACTCTATATCGGAGAGTAG |
| Transcript | >Agabi119p4|072090 ATGGCAGTCACCAAATTACTCAACCTCCTCGCCATTTCCTGCCTTGCCATCATCGCATCTTTCGGCCCTGTCCCG GTTTCAGCCCTCTCCGTTGAATCGGTCCACCATGCGCGTCGCGATCACCACGTTTTAGCTGCAAAGAAACGTGGT AATTCTTCCAAGCGATGCAAGCCCCGTTCCACCACCCCTGCACCCAGCCCTTCCCCTACCACTTCGAAGAAGCCG GCACCCAAGCCCACTTCGTCCAAAGATGTTGCTCCCCCTAGCCCGACCCCACCTAGTGGCGGTGGAGACAGTGGC GCTCGCAAAGTCGGTATTGCTTTTACAGGGGGCGATGAGAGTGCTATCACACAATTCTGGTCCTGGAAAACTCAA TTTTATTACACTTGGAGCCCCTGGTGCATTGATGCCGCTGACAAAGTCGGCTTCCAATGCTGTCGCATGTTGTGG GGCTTCAAGCAGATCGACGACTTCACCAAGAATGCTCGGCCTGGTCATGGCAATTGTGCCATGGGTCCGAATGAG CCCAACGAACCCAGCCAATCCAATATGAGTCCTCAAGACGCCGCTGGCCTCTGGAAACAATACCTAGAACCTCTT CATGATAATGGATACACTCTGATTAGCCCTGCTTGTACGAATGCTCCTTCCGGCAAGACTTGGATGCAAGACTTC TTCAAGGCCTGTGATGGCTGTCACGTCGATCGTCTGGCGGTACACTTCTACGGGACTGATGCGCAGGATCTTATT GACTATGTCGAAGACATGCATGCCACCTTCGGCAAACAGGTTTGGGTTACCGAGTTTGCCTGCCAAGACTTCTCT GGTGGTCAACAAAGTAATCAGCAACAGGTCACTGAATTCATGCAGAAAGTCACTGCGTACATGGATCACACCGAT AAAGTCGGCCAATACTTCGCGTTTGGTGCCTTAACAAACATGGGCAACGTGAACCCGAAAAATCAGTTATTGAAT CCTAGTGGCAGCGGACTCACGTCCCTTGGTAAACTCTATATCGGAGAGTAG |
| Gene | >Agabi119p4|072090 ATGGCAGTCACCAAATTACTCAACCTCCTCGCCATTTCCTGCCTTGCCATCATCGCATCTTTCGGCCCTGTCCCG GTTTCAGCCCTCTCCGTTGAATCGGTCCACCATGCGCGTCGCGATCACCACGTTTTAGCTGCAAAGAAACGTGGT AATTCTTCCAAGCGATGCAAGCCCCGTTCCACCACCCCTGCACCCAGCCCTTCCCCTACCACTTCGAAGAAGCCG GCACCCAAGCCCACTTCGTCCAAAGATGTTGCTCCCCCTAGCCCGACCCCACCTAGTGGCGGTGGAGACAGTGGC GCTCGCAAAGTCGGTATTGCTTTTACAGGGGGCGATGAGAGTGCTATCACACAATTCTGGTCCTGGAAAACTCAA TTGTAGGTGTTCCAAACTTTGATAGATGTGCTCGTCAAAGTCTTAACCTTATTCTTCAGTTATTACACTTGGAGC CCCTGGTGCATTGATGCCGCTGACAAAGTCGGCTTCCAATGCTGTCGCATGTTGTGGGGCTTCAAGCAGATCGAC GACTTCACCAAGAATGCTCGGCCTGGTCATGGCAATTGTGCCATGGGTCCGAATGAGTATGTGTGGTGTTTTGAC AACTTAATCGAGTCTCATTGTATCTCGCAGGCCCAACGAACCCAGCCAATCCAATATGAGTCCTCAAGACGCCGC TGGCCTCTGGAAACAATACCTAGAACCTCTTCATGATAATGGATACACTCTGATTAGCCCTGCTTGTACGAATGC TCCTTCCGGCAAGACTTGGATGCAAGACTTCTTCAAGGCCTGTGATGGCTGTCACGTATGCTTTTTTTACATCCG TCTCTTGCAGAATTCACTCAGAGACTGTTTTAACAGGTCGATCGTCTGGCGGTACACTTCTACGGGACTGATGCG CAGGATCTTATTGACTATGTCGAAGACATGCATGCCACCTTCGGCAAACAGGTTTGGGTTACCGAGTTTGCCTGC CAAGACTTCTCTGGTGGTCAACAAAGTAATCAGCAACAGGTCACTGAATTCATGCAGAAAGTCACTGCGTACATG GATCACACCGATAAAGTCGGCCAATACTTCGCGTTTGGTGAGTATAATTCTTGAACTAGAAAATAGCTACGGTTG TTGACTTTTTTTTCTTCAGGTGCCTTAACAAACATGGGCAACGTGAACCCGAAAAATCAGTTATTGAATCCTAGT GGCAGCGGACTCACGTCCCTTGGTAAACTCTATATCGGAGAGTAG |