© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|071030 |
| Gene name | |
| Location | scaffold_04:1307694..1308994 |
| Strand | - |
| Gene length (bp) | 1300 |
| Transcript length (bp) | 1032 |
| Coding sequence length (bp) | 1032 |
| Protein length (aa) | 344 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13460 | NAD_binding_10 | NAD(P)H-binding | 5.3E-09 | 11 | 88 |
| PF05368 | NmrA | NmrA-like family | 5.4E-07 | 9 | 77 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|Q9Y7K4|YGI2_SCHPO | Uncharacterized protein C2A9.02 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC2A9.02 PE=3 SV=1 | 5 | 323 | 8.0E-15 |
| sp|Q12177|YL056_YEAST | Uncharacterized protein YLL056C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLL056C PE=2 SV=1 | 5 | 321 | 4.0E-06 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 11 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|071030 MSPTLKFFFVGATGYIGSSVLERFLDHPDASNFEFTALVRDPRKAEKFKQFGINATVGSFDDAQLVEDLTAAADV VVDAGNADDLGLTKSMLRGFKRGFQKTGKPSTFIHTSGTGVLIDDAAGLRTTDVIWNDADPDQIEQLPPTAPHRD VDLEILQADKEGYVRAYFVLPSTIYGMASGKFVDAGLANKHSVQVPALIKTSLDRGQAGMIGKGLNIWPNVHIDE AADFYIELFNAIKANPDAVGHGRGGFYILLNGEHTLYDVSKEIGRALVALGKATTEVPSTYTQEEVNKYFGGSNY LGTNSRGLANHSRSIGWKPKKTTQDFLASIGPEVEEIAKSKHL* |
| Coding | >Agabi119p4|071030 ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGCTATATCGGCAGCTCCGTTCTAGAGCGTTTCCTC GATCATCCGGACGCCAGTAACTTTGAATTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAAAATTCAAGCAA TTCGGCATAAATGCTACTGTCGGTTCTTTTGATGATGCTCAGCTCGTCGAGGATTTGACTGCCGCTGCAGACGTT GTCGTAGACGCAGGAAATGCAGATGATCTTGGACTCACCAAAAGTATGCTTCGCGGCTTCAAAAGAGGGTTCCAA AAAACTGGGAAACCTTCGACTTTTATTCACACCTCCGGAACCGGCGTCTTAATTGATGATGCTGCGGGCCTTCGC ACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACCGCACCCCATCGTGAC GTAGACCTTGAGATCCTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTACAATATAT GGAATGGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTGTTCAAGTACCTGCCCTCATCAAG ACCTCACTTGACAGAGGACAGGCTGGGATGATCGGTAAAGGATTGAACATCTGGCCAAACGTTCATATTGATGAA GCCGCCGATTTCTATATCGAGCTCTTTAACGCAATCAAAGCCAACCCCGACGCCGTTGGTCATGGCCGCGGCGGT TTTTATATTCTGTTGAATGGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTT GGAAAGGCGACCACCGAAGTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTTGGAGGTTCAAATTAC TTGGGCACAAACTCGAGGGGGTTGGCCAATCATTCTAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGAC TTTTTAGCGAGCATCGGGCCTGAAGTAGAGGAGATTGCGAAATCAAAGCATTTGTAA |
| Transcript | >Agabi119p4|071030 ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGCTATATCGGCAGCTCCGTTCTAGAGCGTTTCCTC GATCATCCGGACGCCAGTAACTTTGAATTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAAAATTCAAGCAA TTCGGCATAAATGCTACTGTCGGTTCTTTTGATGATGCTCAGCTCGTCGAGGATTTGACTGCCGCTGCAGACGTT GTCGTAGACGCAGGAAATGCAGATGATCTTGGACTCACCAAAAGTATGCTTCGCGGCTTCAAAAGAGGGTTCCAA AAAACTGGGAAACCTTCGACTTTTATTCACACCTCCGGAACCGGCGTCTTAATTGATGATGCTGCGGGCCTTCGC ACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACCGCACCCCATCGTGAC GTAGACCTTGAGATCCTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTACAATATAT GGAATGGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTGTTCAAGTACCTGCCCTCATCAAG ACCTCACTTGACAGAGGACAGGCTGGGATGATCGGTAAAGGATTGAACATCTGGCCAAACGTTCATATTGATGAA GCCGCCGATTTCTATATCGAGCTCTTTAACGCAATCAAAGCCAACCCCGACGCCGTTGGTCATGGCCGCGGCGGT TTTTATATTCTGTTGAATGGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTT GGAAAGGCGACCACCGAAGTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTTGGAGGTTCAAATTAC TTGGGCACAAACTCGAGGGGGTTGGCCAATCATTCTAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGAC TTTTTAGCGAGCATCGGGCCTGAAGTAGAGGAGATTGCGAAATCAAAGCATTTGTAA |
| Gene | >Agabi119p4|071030 ATGTCTCCTACCCTCAAATTCTTTTTCGTCGGTGCTACTGGTCAGCTTAAATCCACATTTCTTTGCATGAGTTCA TCTCAGACTATCATCTTCAGGCTATATCGGCAGCTCCGTTCTAGAGCGTTTCCTCGATCATCCGGACGCCAGTAA CTTTGAATTTACAGCCCTTGTAAGAGACCCTCGGAAAGCGGAAAAATTCAAGCAATTCGGCATAAATGCTACTGT CGGTTCTTTTGATGATGCTCAGCTCGTCGAGGATTTGACTGCCGCTGCAGACGTTGTCGTAGACGCAGTATGTCA GAAAATCTTGGGTTACATTCATTAAACATACGTGCTTCAGGGAAATGCAGATGATCTTGGACTCACCAAAAGTAT GCTTCGCGGCTTCAAAAGAGGGTTCCAAAAAACTGGGAAACCTTCGACTTTTATTCACACCGTGAGTCTTCGTAC ATATCTACTTGGAGCTAGCTAACTTCAACTCAACTTTCTAGTCCGGAACCGGCGTCTTAATTGATGATGCTGCGG GCCTTCGCACCACTGATGTCATCTGGAACGATGCAGATCCCGACCAGATAGAGCAACTGCCACCAACCGCACCCC ATCGTGACGTAGACCTTGAGATCCTTCAAGCCGATAAGGAGGGTTATGTTCGCGCTTACTTCGTGCTTCCCAGTA CAATATATGGAATGGCCTCTGGAAAGTTCGTAGATGCCGGTCTCGCTAATAAGCATTCTGTTCAAGTACCTGCCC TCATCAAGACCTCACTTGACAGAGGACAGGCTGGGATGATCGGTAAAGGATTGAACATCTGGCCAAACGTTCATA TTGATGAAGGTCAGCTCACTGACTCCCTTGGTCCGAGTCCGTTCATTTATTTGGAAATTAGCCGCCGATTTCTAT ATCGAGCTCTTTAACGCAATCAAAGCCAACCCCGACGCCGTTGGTCATGGCCGCGGCGGTTTTTATATTCTGTTG AATGGAGAGCACACTCTCTATGATGTTAGCAAAGAGATCGGCCGTGCACTAGTTGCCCTTGGAAAGGCGACCACC GAAGTGCCCTCCACATACACCCAGGAAGAAGTGAACAAGTATTTTGGAGTGAGTTTTGATCATTCTTGGGCTCAT TGAGGGCGGGTCGAACCTGACGTCTCCATAGGGTTCAAATTACTTGGGCACAAACTCGAGGGGGTTGGCCAATCA TTCTAGATCCATCGGATGGAAACCGAAGAAAACAACTCAGGACTTTTTAGCGAGCATCGGGCCTGAAGTAGAGGA GATTGCGAAATCAAAGCATTTGTAA |