Protein ID | Agabi119p4|068540 |
Gene name | |
Location | scaffold_04:970730..972181 |
Strand | - |
Gene length (bp) | 1451 |
Transcript length (bp) | 1230 |
Coding sequence length (bp) | 1230 |
Protein length (aa) | 410 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF18388 | ATG29_N | Atg29 N-terminal domain | 6.5E-15 | 9 | 65 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 23 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Agabi119p4|068540 MPQNTPSVRVVVRLPWNRPENAEPDPPHIEWTQEKADILWKVIEKSRSSDSSGADWKGLAAHLEVPLPYLLYRVN ARFQEEIRGLKDIQGALSPSSVTSPNPKVEVPAQADKPVLAIRTGLNSKLSSSRLSTPRDVHARLNSLVTNSPRP KKVISSSTITVQGIKRSPGFIRTHSPLSSDDGVLSDEDETILKEEEAERNAEEQETVDRKLEELTRLINADTLGL VRTHRPRRSLDRERTSASPSNSSKSNSTSNANSAAASFRGDSLSSVRSDKSENQSLSSAISSPPGSIPEIPSPRS DSQSHSPMYPGRQNDSPEKSASPAAVSSRSALSHSHNRRHAQLLSEHESSEASSFSDLSDASLSASALESALMSN IAGMRTTPAASRLTPQFNSRSRIDHNTHNPSRPF* |
Coding | >Agabi119p4|068540 ATGCCACAAAACACTCCCTCCGTCCGAGTCGTCGTTCGGCTGCCTTGGAACAGGCCCGAAAACGCCGAACCTGAT CCTCCACACATAGAATGGACTCAGGAAAAAGCTGACATATTATGGAAAGTGATAGAGAAATCGCGTTCCAGCGAC AGCAGTGGTGCTGACTGGAAAGGACTTGCGGCACATCTCGAAGTCCCATTACCGTACCTACTTTATCGAGTCAAT GCTCGGTTTCAAGAAGAGATTCGCGGGCTCAAGGACATTCAAGGCGCCCTTAGTCCCTCTTCTGTGACATCCCCA AACCCGAAAGTCGAAGTCCCCGCCCAGGCCGACAAGCCCGTACTAGCGATACGAACAGGACTCAATTCGAAACTC TCATCTTCTAGATTGAGTACACCTCGCGACGTGCACGCGCGGTTGAACTCCCTCGTCACCAACTCCCCAAGGCCG AAGAAAGTCATATCATCATCCACAATAACCGTTCAAGGTATCAAGCGTAGTCCAGGTTTCATTCGTACACACTCC CCTCTGTCTTCCGATGACGGCGTCCTATCCGACGAAGACGAAACCATACTCAAAGAAGAGGAAGCAGAACGCAAT GCAGAAGAACAAGAAACTGTTGACCGCAAACTCGAGGAGCTAACGCGACTTATTAACGCGGATACTCTCGGACTT GTACGCACTCACAGGCCTAGACGTAGTTTGGATCGCGAACGAACAAGCGCCTCTCCTTCAAATTCATCTAAATCA AATTCCACATCAAACGCAAACTCAGCCGCTGCTAGTTTCAGAGGGGACTCTTTATCAAGTGTGAGGAGCGACAAG AGTGAGAATCAAAGTCTCTCAAGTGCTATCAGTTCTCCGCCGGGGTCAATACCCGAAATTCCATCTCCTCGATCA GATTCACAATCTCATTCGCCGATGTATCCGGGAAGGCAAAACGACTCGCCTGAGAAATCTGCTAGTCCAGCTGCT GTGAGTTCCAGAAGTGCGCTGAGCCATTCACACAACAGGAGGCATGCTCAATTGTTGAGTGAACACGAGAGTTCT GAGGCATCGAGTTTCAGTGATCTTAGCGACGCCAGCCTATCGGCTTCTGCGCTCGAGAGTGCTCTCATGTCAAAT ATTGCTGGCATGCGTACTACGCCTGCGGCTTCTAGACTAACCCCACAATTCAATTCTCGTAGTCGCATTGATCAC AATACTCACAATCCGTCGAGACCTTTCTAG |
Transcript | >Agabi119p4|068540 ATGCCACAAAACACTCCCTCCGTCCGAGTCGTCGTTCGGCTGCCTTGGAACAGGCCCGAAAACGCCGAACCTGAT CCTCCACACATAGAATGGACTCAGGAAAAAGCTGACATATTATGGAAAGTGATAGAGAAATCGCGTTCCAGCGAC AGCAGTGGTGCTGACTGGAAAGGACTTGCGGCACATCTCGAAGTCCCATTACCGTACCTACTTTATCGAGTCAAT GCTCGGTTTCAAGAAGAGATTCGCGGGCTCAAGGACATTCAAGGCGCCCTTAGTCCCTCTTCTGTGACATCCCCA AACCCGAAAGTCGAAGTCCCCGCCCAGGCCGACAAGCCCGTACTAGCGATACGAACAGGACTCAATTCGAAACTC TCATCTTCTAGATTGAGTACACCTCGCGACGTGCACGCGCGGTTGAACTCCCTCGTCACCAACTCCCCAAGGCCG AAGAAAGTCATATCATCATCCACAATAACCGTTCAAGGTATCAAGCGTAGTCCAGGTTTCATTCGTACACACTCC CCTCTGTCTTCCGATGACGGCGTCCTATCCGACGAAGACGAAACCATACTCAAAGAAGAGGAAGCAGAACGCAAT GCAGAAGAACAAGAAACTGTTGACCGCAAACTCGAGGAGCTAACGCGACTTATTAACGCGGATACTCTCGGACTT GTACGCACTCACAGGCCTAGACGTAGTTTGGATCGCGAACGAACAAGCGCCTCTCCTTCAAATTCATCTAAATCA AATTCCACATCAAACGCAAACTCAGCCGCTGCTAGTTTCAGAGGGGACTCTTTATCAAGTGTGAGGAGCGACAAG AGTGAGAATCAAAGTCTCTCAAGTGCTATCAGTTCTCCGCCGGGGTCAATACCCGAAATTCCATCTCCTCGATCA GATTCACAATCTCATTCGCCGATGTATCCGGGAAGGCAAAACGACTCGCCTGAGAAATCTGCTAGTCCAGCTGCT GTGAGTTCCAGAAGTGCGCTGAGCCATTCACACAACAGGAGGCATGCTCAATTGTTGAGTGAACACGAGAGTTCT GAGGCATCGAGTTTCAGTGATCTTAGCGACGCCAGCCTATCGGCTTCTGCGCTCGAGAGTGCTCTCATGTCAAAT ATTGCTGGCATGCGTACTACGCCTGCGGCTTCTAGACTAACCCCACAATTCAATTCTCGTAGTCGCATTGATCAC AATACTCACAATCCGTCGAGACCTTTCTAG |
Gene | >Agabi119p4|068540 ATGCCACAAAACACTCCCTCCGTCCGAGTCGTCGTTCGGCTGCCTTGGAACAGGCCCGAAAACGCCGAACCTGAT CCTCCACACGTGCGTGCTGTGTTTTTCTACATTCCTTAGGCGTTAGTGACCTTTCTATTCCCTCAGATAGAATGG ACTCAGGAAAAAGCTGACATATTATGGAAAGTGATAGAGAAATCGCGTTCCAGCGACAGCAGTGGTGCTGACTGT ATGTAACCGTCGTTTTCGTGTCGTATGACCTTGAATTCTCATATGATAGTGCAGGGAAAGGACTTGCGGCACATC TCGAAGTCCCATTACCGTACCTACTTTATCGAGTCAATGCTCGGTTTCAAGAAGAGATTCGCGGGCTCAAGGACA TTCAAGGCGCCCTTAGTCCCTCTTCTGTGACATCCCCAAACCCGAAAGTCGAAGTCCCCGCCCAGGCCGACAAGC CCGTACTAGCGATACGAACAGGACTCAATTCGAAACTCTCATCTTCTAGATTGAGTACACCTCGCGACGTGCACG CGCGGTTGAACTCCCTCGTCACCAACTCCCCAAGGCCGAAGAAAGTCATATCATCATCCACAATAACCGTTCAAG GTATCAAGCGTAGTCCAGGTTTCATTCGTACACACTCCCCTCTGTCTTCCGATGACGGCGTCCTATCCGACGAAG ACGAAACCATACTCAAAGAAGAGGAAGCAGAACGCAATGCAGAAGAACAAGAAACTGTTGACCGCAAACTCGAGG AGCTAACGCGACTTATTAACGCGGATACTCTCGGACTTGTACGCACTCACAGGCCTAGACGTAGTTTGGATCGCG AACGAACAAGCGCCTCTCCTTCAAATTCATCTAAATCAAATTCCACATCAAACGCAAACTCAGCCGCTGCTAGTT TCAGAGGGGACTCTTTATCAAGTGTGAGGAGCGACAAGAGTGAGAATCAAAGTCTCTCAAGTGCTATCAGTTCTC CGCCGGGGTCAATACCCGAAATTCCATCTCCTCGATCAGATTCACAATCTCATTCGCCGATGTATCCGGGAAGGC AAAACGACTCGCCTGAGAAATCTGCTAGTCCAGCTGCTGTGAGTTCCAGAAGTGCGCTGAGCCATTCACACAACA GGAGGCATGCTCAATTGTTGAGTGAACACGAGAGTTCTGAGGCATCGAGTTTCAGTGATCTTAGCGGTAAGTGAT ACTGGTGTTTTATTGTGCAATGCGATTAAAGGCTTTACTAGACGCCAGCCTATCGGCTTCTGCGCTCGAGAGTGC TCTCATGTCAAATATTGCTGGCATGCGTACTACGCCTGCGGCTTCTAGACTGTAAATCTGCTGCGATTTGTTGAT TATCTTGGACATGGCTTCTCATATCGTTTTCTAGAACCCCACAATTCAATTCTCGTAGTCGCATTGATCACAATA CTCACAATCCGTCGAGACCTTTCTAG |