Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|068540
Gene name
Locationscaffold_04:970730..972181
Strand-
Gene length (bp)1451
Transcript length (bp)1230
Coding sequence length (bp)1230
Protein length (aa) 410

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18388 ATG29_N Atg29 N-terminal domain 6.5E-15 9 65

Swissprot hits

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|068540
MPQNTPSVRVVVRLPWNRPENAEPDPPHIEWTQEKADILWKVIEKSRSSDSSGADWKGLAAHLEVPLPYLLYRVN
ARFQEEIRGLKDIQGALSPSSVTSPNPKVEVPAQADKPVLAIRTGLNSKLSSSRLSTPRDVHARLNSLVTNSPRP
KKVISSSTITVQGIKRSPGFIRTHSPLSSDDGVLSDEDETILKEEEAERNAEEQETVDRKLEELTRLINADTLGL
VRTHRPRRSLDRERTSASPSNSSKSNSTSNANSAAASFRGDSLSSVRSDKSENQSLSSAISSPPGSIPEIPSPRS
DSQSHSPMYPGRQNDSPEKSASPAAVSSRSALSHSHNRRHAQLLSEHESSEASSFSDLSDASLSASALESALMSN
IAGMRTTPAASRLTPQFNSRSRIDHNTHNPSRPF*
Coding >Agabi119p4|068540
ATGCCACAAAACACTCCCTCCGTCCGAGTCGTCGTTCGGCTGCCTTGGAACAGGCCCGAAAACGCCGAACCTGAT
CCTCCACACATAGAATGGACTCAGGAAAAAGCTGACATATTATGGAAAGTGATAGAGAAATCGCGTTCCAGCGAC
AGCAGTGGTGCTGACTGGAAAGGACTTGCGGCACATCTCGAAGTCCCATTACCGTACCTACTTTATCGAGTCAAT
GCTCGGTTTCAAGAAGAGATTCGCGGGCTCAAGGACATTCAAGGCGCCCTTAGTCCCTCTTCTGTGACATCCCCA
AACCCGAAAGTCGAAGTCCCCGCCCAGGCCGACAAGCCCGTACTAGCGATACGAACAGGACTCAATTCGAAACTC
TCATCTTCTAGATTGAGTACACCTCGCGACGTGCACGCGCGGTTGAACTCCCTCGTCACCAACTCCCCAAGGCCG
AAGAAAGTCATATCATCATCCACAATAACCGTTCAAGGTATCAAGCGTAGTCCAGGTTTCATTCGTACACACTCC
CCTCTGTCTTCCGATGACGGCGTCCTATCCGACGAAGACGAAACCATACTCAAAGAAGAGGAAGCAGAACGCAAT
GCAGAAGAACAAGAAACTGTTGACCGCAAACTCGAGGAGCTAACGCGACTTATTAACGCGGATACTCTCGGACTT
GTACGCACTCACAGGCCTAGACGTAGTTTGGATCGCGAACGAACAAGCGCCTCTCCTTCAAATTCATCTAAATCA
AATTCCACATCAAACGCAAACTCAGCCGCTGCTAGTTTCAGAGGGGACTCTTTATCAAGTGTGAGGAGCGACAAG
AGTGAGAATCAAAGTCTCTCAAGTGCTATCAGTTCTCCGCCGGGGTCAATACCCGAAATTCCATCTCCTCGATCA
GATTCACAATCTCATTCGCCGATGTATCCGGGAAGGCAAAACGACTCGCCTGAGAAATCTGCTAGTCCAGCTGCT
GTGAGTTCCAGAAGTGCGCTGAGCCATTCACACAACAGGAGGCATGCTCAATTGTTGAGTGAACACGAGAGTTCT
GAGGCATCGAGTTTCAGTGATCTTAGCGACGCCAGCCTATCGGCTTCTGCGCTCGAGAGTGCTCTCATGTCAAAT
ATTGCTGGCATGCGTACTACGCCTGCGGCTTCTAGACTAACCCCACAATTCAATTCTCGTAGTCGCATTGATCAC
AATACTCACAATCCGTCGAGACCTTTCTAG
Transcript >Agabi119p4|068540
ATGCCACAAAACACTCCCTCCGTCCGAGTCGTCGTTCGGCTGCCTTGGAACAGGCCCGAAAACGCCGAACCTGAT
CCTCCACACATAGAATGGACTCAGGAAAAAGCTGACATATTATGGAAAGTGATAGAGAAATCGCGTTCCAGCGAC
AGCAGTGGTGCTGACTGGAAAGGACTTGCGGCACATCTCGAAGTCCCATTACCGTACCTACTTTATCGAGTCAAT
GCTCGGTTTCAAGAAGAGATTCGCGGGCTCAAGGACATTCAAGGCGCCCTTAGTCCCTCTTCTGTGACATCCCCA
AACCCGAAAGTCGAAGTCCCCGCCCAGGCCGACAAGCCCGTACTAGCGATACGAACAGGACTCAATTCGAAACTC
TCATCTTCTAGATTGAGTACACCTCGCGACGTGCACGCGCGGTTGAACTCCCTCGTCACCAACTCCCCAAGGCCG
AAGAAAGTCATATCATCATCCACAATAACCGTTCAAGGTATCAAGCGTAGTCCAGGTTTCATTCGTACACACTCC
CCTCTGTCTTCCGATGACGGCGTCCTATCCGACGAAGACGAAACCATACTCAAAGAAGAGGAAGCAGAACGCAAT
GCAGAAGAACAAGAAACTGTTGACCGCAAACTCGAGGAGCTAACGCGACTTATTAACGCGGATACTCTCGGACTT
GTACGCACTCACAGGCCTAGACGTAGTTTGGATCGCGAACGAACAAGCGCCTCTCCTTCAAATTCATCTAAATCA
AATTCCACATCAAACGCAAACTCAGCCGCTGCTAGTTTCAGAGGGGACTCTTTATCAAGTGTGAGGAGCGACAAG
AGTGAGAATCAAAGTCTCTCAAGTGCTATCAGTTCTCCGCCGGGGTCAATACCCGAAATTCCATCTCCTCGATCA
GATTCACAATCTCATTCGCCGATGTATCCGGGAAGGCAAAACGACTCGCCTGAGAAATCTGCTAGTCCAGCTGCT
GTGAGTTCCAGAAGTGCGCTGAGCCATTCACACAACAGGAGGCATGCTCAATTGTTGAGTGAACACGAGAGTTCT
GAGGCATCGAGTTTCAGTGATCTTAGCGACGCCAGCCTATCGGCTTCTGCGCTCGAGAGTGCTCTCATGTCAAAT
ATTGCTGGCATGCGTACTACGCCTGCGGCTTCTAGACTAACCCCACAATTCAATTCTCGTAGTCGCATTGATCAC
AATACTCACAATCCGTCGAGACCTTTCTAG
Gene >Agabi119p4|068540
ATGCCACAAAACACTCCCTCCGTCCGAGTCGTCGTTCGGCTGCCTTGGAACAGGCCCGAAAACGCCGAACCTGAT
CCTCCACACGTGCGTGCTGTGTTTTTCTACATTCCTTAGGCGTTAGTGACCTTTCTATTCCCTCAGATAGAATGG
ACTCAGGAAAAAGCTGACATATTATGGAAAGTGATAGAGAAATCGCGTTCCAGCGACAGCAGTGGTGCTGACTGT
ATGTAACCGTCGTTTTCGTGTCGTATGACCTTGAATTCTCATATGATAGTGCAGGGAAAGGACTTGCGGCACATC
TCGAAGTCCCATTACCGTACCTACTTTATCGAGTCAATGCTCGGTTTCAAGAAGAGATTCGCGGGCTCAAGGACA
TTCAAGGCGCCCTTAGTCCCTCTTCTGTGACATCCCCAAACCCGAAAGTCGAAGTCCCCGCCCAGGCCGACAAGC
CCGTACTAGCGATACGAACAGGACTCAATTCGAAACTCTCATCTTCTAGATTGAGTACACCTCGCGACGTGCACG
CGCGGTTGAACTCCCTCGTCACCAACTCCCCAAGGCCGAAGAAAGTCATATCATCATCCACAATAACCGTTCAAG
GTATCAAGCGTAGTCCAGGTTTCATTCGTACACACTCCCCTCTGTCTTCCGATGACGGCGTCCTATCCGACGAAG
ACGAAACCATACTCAAAGAAGAGGAAGCAGAACGCAATGCAGAAGAACAAGAAACTGTTGACCGCAAACTCGAGG
AGCTAACGCGACTTATTAACGCGGATACTCTCGGACTTGTACGCACTCACAGGCCTAGACGTAGTTTGGATCGCG
AACGAACAAGCGCCTCTCCTTCAAATTCATCTAAATCAAATTCCACATCAAACGCAAACTCAGCCGCTGCTAGTT
TCAGAGGGGACTCTTTATCAAGTGTGAGGAGCGACAAGAGTGAGAATCAAAGTCTCTCAAGTGCTATCAGTTCTC
CGCCGGGGTCAATACCCGAAATTCCATCTCCTCGATCAGATTCACAATCTCATTCGCCGATGTATCCGGGAAGGC
AAAACGACTCGCCTGAGAAATCTGCTAGTCCAGCTGCTGTGAGTTCCAGAAGTGCGCTGAGCCATTCACACAACA
GGAGGCATGCTCAATTGTTGAGTGAACACGAGAGTTCTGAGGCATCGAGTTTCAGTGATCTTAGCGGTAAGTGAT
ACTGGTGTTTTATTGTGCAATGCGATTAAAGGCTTTACTAGACGCCAGCCTATCGGCTTCTGCGCTCGAGAGTGC
TCTCATGTCAAATATTGCTGGCATGCGTACTACGCCTGCGGCTTCTAGACTGTAAATCTGCTGCGATTTGTTGAT
TATCTTGGACATGGCTTCTCATATCGTTTTCTAGAACCCCACAATTCAATTCTCGTAGTCGCATTGATCACAATA
CTCACAATCCGTCGAGACCTTTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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