Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|068540
Gene name
Locationscaffold_04:970730..972181
Strand-
Gene length (bp)1451
Transcript length (bp)1230
Coding sequence length (bp)1230
Protein length (aa) 410

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF18388 ATG29_N Atg29 N-terminal domain 6.5E-15 9 65

Swissprot hits

(None)

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID5
Orthogroup4761
Change Orthofinder run
Species Protein ID
Agaricus bisporus var bisporus H39 AgabiH39|068540
Agaricus bisporus var bisporus H97 AgabiH97|068540
Agaricus bisporus var burnettii H119p4 Agabi119p4|068540 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|068540
MPQNTPSVRVVVRLPWNRPENAEPDPPHIEWTQEKADILWKVIEKSRSSDSSGADWKGLAAHLEVPLPYLLYRVN
ARFQEEIRGLKDIQGALSPSSVTSPNPKVEVPAQADKPVLAIRTGLNSKLSSSRLSTPRDVHARLNSLVTNSPRP
KKVISSSTITVQGIKRSPGFIRTHSPLSSDDGVLSDEDETILKEEEAERNAEEQETVDRKLEELTRLINADTLGL
VRTHRPRRSLDRERTSASPSNSSKSNSTSNANSAAASFRGDSLSSVRSDKSENQSLSSAISSPPGSIPEIPSPRS
DSQSHSPMYPGRQNDSPEKSASPAAVSSRSALSHSHNRRHAQLLSEHESSEASSFSDLSDASLSASALESALMSN
IAGMRTTPAASRLTPQFNSRSRIDHNTHNPSRPF*
Coding >Agabi119p4|068540
ATGCCACAAAACACTCCCTCCGTCCGAGTCGTCGTTCGGCTGCCTTGGAACAGGCCCGAAAACGCCGAACCTGAT
CCTCCACACATAGAATGGACTCAGGAAAAAGCTGACATATTATGGAAAGTGATAGAGAAATCGCGTTCCAGCGAC
AGCAGTGGTGCTGACTGGAAAGGACTTGCGGCACATCTCGAAGTCCCATTACCGTACCTACTTTATCGAGTCAAT
GCTCGGTTTCAAGAAGAGATTCGCGGGCTCAAGGACATTCAAGGCGCCCTTAGTCCCTCTTCTGTGACATCCCCA
AACCCGAAAGTCGAAGTCCCCGCCCAGGCCGACAAGCCCGTACTAGCGATACGAACAGGACTCAATTCGAAACTC
TCATCTTCTAGATTGAGTACACCTCGCGACGTGCACGCGCGGTTGAACTCCCTCGTCACCAACTCCCCAAGGCCG
AAGAAAGTCATATCATCATCCACAATAACCGTTCAAGGTATCAAGCGTAGTCCAGGTTTCATTCGTACACACTCC
CCTCTGTCTTCCGATGACGGCGTCCTATCCGACGAAGACGAAACCATACTCAAAGAAGAGGAAGCAGAACGCAAT
GCAGAAGAACAAGAAACTGTTGACCGCAAACTCGAGGAGCTAACGCGACTTATTAACGCGGATACTCTCGGACTT
GTACGCACTCACAGGCCTAGACGTAGTTTGGATCGCGAACGAACAAGCGCCTCTCCTTCAAATTCATCTAAATCA
AATTCCACATCAAACGCAAACTCAGCCGCTGCTAGTTTCAGAGGGGACTCTTTATCAAGTGTGAGGAGCGACAAG
AGTGAGAATCAAAGTCTCTCAAGTGCTATCAGTTCTCCGCCGGGGTCAATACCCGAAATTCCATCTCCTCGATCA
GATTCACAATCTCATTCGCCGATGTATCCGGGAAGGCAAAACGACTCGCCTGAGAAATCTGCTAGTCCAGCTGCT
GTGAGTTCCAGAAGTGCGCTGAGCCATTCACACAACAGGAGGCATGCTCAATTGTTGAGTGAACACGAGAGTTCT
GAGGCATCGAGTTTCAGTGATCTTAGCGACGCCAGCCTATCGGCTTCTGCGCTCGAGAGTGCTCTCATGTCAAAT
ATTGCTGGCATGCGTACTACGCCTGCGGCTTCTAGACTAACCCCACAATTCAATTCTCGTAGTCGCATTGATCAC
AATACTCACAATCCGTCGAGACCTTTCTAG
Transcript >Agabi119p4|068540
ATGCCACAAAACACTCCCTCCGTCCGAGTCGTCGTTCGGCTGCCTTGGAACAGGCCCGAAAACGCCGAACCTGAT
CCTCCACACATAGAATGGACTCAGGAAAAAGCTGACATATTATGGAAAGTGATAGAGAAATCGCGTTCCAGCGAC
AGCAGTGGTGCTGACTGGAAAGGACTTGCGGCACATCTCGAAGTCCCATTACCGTACCTACTTTATCGAGTCAAT
GCTCGGTTTCAAGAAGAGATTCGCGGGCTCAAGGACATTCAAGGCGCCCTTAGTCCCTCTTCTGTGACATCCCCA
AACCCGAAAGTCGAAGTCCCCGCCCAGGCCGACAAGCCCGTACTAGCGATACGAACAGGACTCAATTCGAAACTC
TCATCTTCTAGATTGAGTACACCTCGCGACGTGCACGCGCGGTTGAACTCCCTCGTCACCAACTCCCCAAGGCCG
AAGAAAGTCATATCATCATCCACAATAACCGTTCAAGGTATCAAGCGTAGTCCAGGTTTCATTCGTACACACTCC
CCTCTGTCTTCCGATGACGGCGTCCTATCCGACGAAGACGAAACCATACTCAAAGAAGAGGAAGCAGAACGCAAT
GCAGAAGAACAAGAAACTGTTGACCGCAAACTCGAGGAGCTAACGCGACTTATTAACGCGGATACTCTCGGACTT
GTACGCACTCACAGGCCTAGACGTAGTTTGGATCGCGAACGAACAAGCGCCTCTCCTTCAAATTCATCTAAATCA
AATTCCACATCAAACGCAAACTCAGCCGCTGCTAGTTTCAGAGGGGACTCTTTATCAAGTGTGAGGAGCGACAAG
AGTGAGAATCAAAGTCTCTCAAGTGCTATCAGTTCTCCGCCGGGGTCAATACCCGAAATTCCATCTCCTCGATCA
GATTCACAATCTCATTCGCCGATGTATCCGGGAAGGCAAAACGACTCGCCTGAGAAATCTGCTAGTCCAGCTGCT
GTGAGTTCCAGAAGTGCGCTGAGCCATTCACACAACAGGAGGCATGCTCAATTGTTGAGTGAACACGAGAGTTCT
GAGGCATCGAGTTTCAGTGATCTTAGCGACGCCAGCCTATCGGCTTCTGCGCTCGAGAGTGCTCTCATGTCAAAT
ATTGCTGGCATGCGTACTACGCCTGCGGCTTCTAGACTAACCCCACAATTCAATTCTCGTAGTCGCATTGATCAC
AATACTCACAATCCGTCGAGACCTTTCTAG
Gene >Agabi119p4|068540
ATGCCACAAAACACTCCCTCCGTCCGAGTCGTCGTTCGGCTGCCTTGGAACAGGCCCGAAAACGCCGAACCTGAT
CCTCCACACGTGCGTGCTGTGTTTTTCTACATTCCTTAGGCGTTAGTGACCTTTCTATTCCCTCAGATAGAATGG
ACTCAGGAAAAAGCTGACATATTATGGAAAGTGATAGAGAAATCGCGTTCCAGCGACAGCAGTGGTGCTGACTGT
ATGTAACCGTCGTTTTCGTGTCGTATGACCTTGAATTCTCATATGATAGTGCAGGGAAAGGACTTGCGGCACATC
TCGAAGTCCCATTACCGTACCTACTTTATCGAGTCAATGCTCGGTTTCAAGAAGAGATTCGCGGGCTCAAGGACA
TTCAAGGCGCCCTTAGTCCCTCTTCTGTGACATCCCCAAACCCGAAAGTCGAAGTCCCCGCCCAGGCCGACAAGC
CCGTACTAGCGATACGAACAGGACTCAATTCGAAACTCTCATCTTCTAGATTGAGTACACCTCGCGACGTGCACG
CGCGGTTGAACTCCCTCGTCACCAACTCCCCAAGGCCGAAGAAAGTCATATCATCATCCACAATAACCGTTCAAG
GTATCAAGCGTAGTCCAGGTTTCATTCGTACACACTCCCCTCTGTCTTCCGATGACGGCGTCCTATCCGACGAAG
ACGAAACCATACTCAAAGAAGAGGAAGCAGAACGCAATGCAGAAGAACAAGAAACTGTTGACCGCAAACTCGAGG
AGCTAACGCGACTTATTAACGCGGATACTCTCGGACTTGTACGCACTCACAGGCCTAGACGTAGTTTGGATCGCG
AACGAACAAGCGCCTCTCCTTCAAATTCATCTAAATCAAATTCCACATCAAACGCAAACTCAGCCGCTGCTAGTT
TCAGAGGGGACTCTTTATCAAGTGTGAGGAGCGACAAGAGTGAGAATCAAAGTCTCTCAAGTGCTATCAGTTCTC
CGCCGGGGTCAATACCCGAAATTCCATCTCCTCGATCAGATTCACAATCTCATTCGCCGATGTATCCGGGAAGGC
AAAACGACTCGCCTGAGAAATCTGCTAGTCCAGCTGCTGTGAGTTCCAGAAGTGCGCTGAGCCATTCACACAACA
GGAGGCATGCTCAATTGTTGAGTGAACACGAGAGTTCTGAGGCATCGAGTTTCAGTGATCTTAGCGGTAAGTGAT
ACTGGTGTTTTATTGTGCAATGCGATTAAAGGCTTTACTAGACGCCAGCCTATCGGCTTCTGCGCTCGAGAGTGC
TCTCATGTCAAATATTGCTGGCATGCGTACTACGCCTGCGGCTTCTAGACTGTAAATCTGCTGCGATTTGTTGAT
TATCTTGGACATGGCTTCTCATATCGTTTTCTAGAACCCCACAATTCAATTCTCGTAGTCGCATTGATCACAATA
CTCACAATCCGTCGAGACCTTTCTAG

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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