Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|067670
Gene name
Location	scaffold_04:754822..756715
Strand	-
Gene length (bp)	1893
Transcript length (bp)	1677
Coding sequence length (bp)	1677
Protein length (aa)	559

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF05783	DLIC	Dynein light intermediate chain (DLIC)	1.4E-32	14	271
PF05783	DLIC	Dynein light intermediate chain (DLIC)	4.2E-02	312	347

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9QXU8\|DC1L1_RAT	Cytoplasmic dynein 1 light intermediate chain 1 OS=Rattus norvegicus GN=Dync1li1 PE=1 SV=1	14	345	5.0E-30
sp\|Q8R1Q8\|DC1L1_MOUSE	Cytoplasmic dynein 1 light intermediate chain 1 OS=Mus musculus GN=Dync1li1 PE=1 SV=1	14	345	5.0E-30
sp\|Q9Y6G9\|DC1L1_HUMAN	Cytoplasmic dynein 1 light intermediate chain 1 OS=Homo sapiens GN=DYNC1LI1 PE=1 SV=3	14	345	3.0E-29
sp\|Q90828\|DC1L1_CHICK	Cytoplasmic dynein 1 light intermediate chain 1 OS=Gallus gallus GN=DYNC1LI1 PE=1 SV=1	14	360	4.0E-29
sp\|Q62698\|DC1L2_RAT	Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus GN=Dync1li2 PE=1 SV=1	7	356	9.0E-29

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|Q9QXU8\|DC1L1_RAT	Cytoplasmic dynein 1 light intermediate chain 1 OS=Rattus norvegicus GN=Dync1li1 PE=1 SV=1	14	345	5.0E-30
sp\|Q8R1Q8\|DC1L1_MOUSE	Cytoplasmic dynein 1 light intermediate chain 1 OS=Mus musculus GN=Dync1li1 PE=1 SV=1	14	345	5.0E-30
sp\|Q9Y6G9\|DC1L1_HUMAN	Cytoplasmic dynein 1 light intermediate chain 1 OS=Homo sapiens GN=DYNC1LI1 PE=1 SV=3	14	345	3.0E-29
sp\|Q90828\|DC1L1_CHICK	Cytoplasmic dynein 1 light intermediate chain 1 OS=Gallus gallus GN=DYNC1LI1 PE=1 SV=1	14	360	4.0E-29
sp\|Q62698\|DC1L2_RAT	Cytoplasmic dynein 1 light intermediate chain 2 OS=Rattus norvegicus GN=Dync1li2 PE=1 SV=1	7	356	9.0E-29
sp\|O43237\|DC1L2_HUMAN	Cytoplasmic dynein 1 light intermediate chain 2 OS=Homo sapiens GN=DYNC1LI2 PE=1 SV=1	7	356	3.0E-28
sp\|Q4R5P6\|DC1L2_MACFA	Cytoplasmic dynein 1 light intermediate chain 2 OS=Macaca fascicularis GN=DYNC1LI2 PE=2 SV=1	7	356	3.0E-28
sp\|Q5RE09\|DC1L2_PONAB	Cytoplasmic dynein 1 light intermediate chain 2 OS=Pongo abelii GN=DYNC1LI2 PE=2 SV=1	7	356	4.0E-28
sp\|Q6PDL0\|DC1L2_MOUSE	Cytoplasmic dynein 1 light intermediate chain 2 OS=Mus musculus GN=Dync1li2 PE=1 SV=2	7	356	6.0E-28
sp\|Q54CI8\|DC1L1_DICDI	Cytoplasmic dynein 1 light intermediate chain 1 OS=Dictyostelium discoideum GN=dync1li1 PE=3 SV=1	14	340	5.0E-24

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GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	4697
Change Orthofinder run

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39\|067670
Agaricus bisporus var bisporus H97	AgabiH97\|067670
Agaricus bisporus var burnettii H119p4	Agabi119p4\|067670 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|067670 MDNSRSTTPEALPENLWSSILDSVSTSRSLPSKQILLLGQPSTGKSTIASALLQRPVSSEESQDDKRVDFAVGYE FADVRDDGDEDTIARLSVYTVPSSNSSYTTLLPHFLHPRTALTHSLVMIVLDWTRPWSFVEELQTWLLWIERWVK GDGSRELEMVREECRERLQSYLQHYSEPSTDLLPASTSALSNTVLPLGPGTLTHNTAGVPIIVVCSKADLIDEEN DVVASAAGMGGMVKGKGGEWEERTDGIMQVLRTICLKYGASLFYTTPQPTTLQVLRQHALHLLFVPSPPSPAMGG GSDAPAPVRNPFPFQHKPNTLDRDRIVVPVGWDSWGKISVLREGFDAKFWGEAWENDLEEVEGQSSGETGAKKLF TVLVPDQGEKPRILPPINNPMPEQTFLMKHYDENSKKADRDPRASFRNPTDLTTGAPVGIVGPLGSSSFSMPNVE RVLNDMENSTIAASNAANQAAEARKFPNRPTGRPGGIAGLNASTNATPSARTPTSPPTTSPTGGQPSQHEVLQHF FQSLLSSKDRAGGKDRNAANTSPPAKTNGQTEE*
Coding	>Agabi119p4\|067670 ATGGATAATTCGCGTTCAACAACGCCGGAAGCACTACCCGAAAATCTCTGGTCATCTATCTTAGATTCTGTGTCG ACATCCCGCTCTCTTCCCTCAAAACAAATCCTGCTTCTTGGACAACCCTCAACCGGAAAGTCGACAATCGCATCT GCACTGCTACAGAGACCTGTATCTTCTGAAGAAAGTCAGGATGATAAGAGGGTGGACTTTGCCGTTGGTTATGAA TTTGCTGACGTTAGGGACGACGGTGATGAAGATACTATAGCGCGGTTATCGGTCTATACCGTGCCGTCGTCAAAT TCATCATATACAACACTGTTGCCACATTTTCTGCATCCAAGAACGGCACTAACACACTCGTTGGTGATGATCGTA CTAGATTGGACGCGACCATGGTCGTTTGTGGAGGAACTACAGACTTGGTTACTATGGATTGAACGATGGGTTAAA GGAGATGGCTCCAGAGAACTTGAGATGGTGCGCGAAGAGTGCCGTGAGCGATTACAGTCATATCTGCAACATTAT TCTGAGCCGTCTACTGATCTGCTGCCTGCATCTACCTCTGCATTGAGTAACACCGTCTTACCCCTTGGCCCAGGT ACATTGACACACAATACTGCGGGCGTGCCAATAATTGTTGTGTGTAGCAAGGCAGATTTGATAGACGAAGAAAAT GATGTGGTTGCTAGTGCTGCAGGTATGGGTGGCATGGTCAAAGGGAAGGGTGGTGAGTGGGAGGAGCGAACGGAC GGGATCATGCAGGTTCTACGGACGATCTGCCTTAAGTATGGTGCATCACTATTCTACACGACCCCTCAACCCACC ACTCTCCAGGTTCTACGACAGCATGCTTTACACTTACTCTTCGTGCCATCACCACCTTCACCTGCAATGGGTGGT GGATCGGATGCTCCAGCTCCAGTCCGAAATCCCTTCCCTTTCCAGCATAAACCAAACACGCTTGATCGCGACCGC ATTGTAGTGCCTGTCGGATGGGACAGCTGGGGTAAAATATCCGTCTTGAGAGAGGGCTTTGATGCCAAATTCTGG GGCGAGGCTTGGGAAAATGATCTTGAGGAAGTAGAGGGGCAAAGTAGTGGGGAAACAGGTGCCAAGAAGCTCTTC ACAGTTTTAGTCCCGGACCAAGGCGAAAAGCCTCGCATTCTTCCACCCATCAACAATCCAATGCCAGAACAAACG TTCCTTATGAAGCACTACGACGAAAACTCTAAGAAAGCCGATAGAGACCCTCGCGCTTCGTTCAGGAATCCGACG GATCTAACCACAGGTGCTCCTGTGGGTATCGTTGGCCCTCTTGGAAGCAGCAGCTTCAGCATGCCCAATGTCGAA CGTGTACTCAATGATATGGAGAACTCGACGATTGCGGCTTCGAATGCGGCCAATCAGGCTGCCGAAGCGCGCAAA TTCCCTAATCGGCCTACGGGAAGGCCGGGTGGGATTGCGGGGCTCAATGCATCCACCAACGCGACGCCATCTGCT CGTACTCCCACATCGCCTCCCACAACGAGTCCTACTGGTGGACAACCAAGTCAACATGAAGTTTTGCAGCATTTC TTCCAGAGCCTACTGAGCTCCAAAGACCGTGCTGGAGGAAAAGATCGCAACGCGGCCAATACGTCGCCGCCAGCG AAGACCAATGGGCAGACAGAAGAATAG
Transcript	>Agabi119p4\|067670 ATGGATAATTCGCGTTCAACAACGCCGGAAGCACTACCCGAAAATCTCTGGTCATCTATCTTAGATTCTGTGTCG ACATCCCGCTCTCTTCCCTCAAAACAAATCCTGCTTCTTGGACAACCCTCAACCGGAAAGTCGACAATCGCATCT GCACTGCTACAGAGACCTGTATCTTCTGAAGAAAGTCAGGATGATAAGAGGGTGGACTTTGCCGTTGGTTATGAA TTTGCTGACGTTAGGGACGACGGTGATGAAGATACTATAGCGCGGTTATCGGTCTATACCGTGCCGTCGTCAAAT TCATCATATACAACACTGTTGCCACATTTTCTGCATCCAAGAACGGCACTAACACACTCGTTGGTGATGATCGTA CTAGATTGGACGCGACCATGGTCGTTTGTGGAGGAACTACAGACTTGGTTACTATGGATTGAACGATGGGTTAAA GGAGATGGCTCCAGAGAACTTGAGATGGTGCGCGAAGAGTGCCGTGAGCGATTACAGTCATATCTGCAACATTAT TCTGAGCCGTCTACTGATCTGCTGCCTGCATCTACCTCTGCATTGAGTAACACCGTCTTACCCCTTGGCCCAGGT ACATTGACACACAATACTGCGGGCGTGCCAATAATTGTTGTGTGTAGCAAGGCAGATTTGATAGACGAAGAAAAT GATGTGGTTGCTAGTGCTGCAGGTATGGGTGGCATGGTCAAAGGGAAGGGTGGTGAGTGGGAGGAGCGAACGGAC GGGATCATGCAGGTTCTACGGACGATCTGCCTTAAGTATGGTGCATCACTATTCTACACGACCCCTCAACCCACC ACTCTCCAGGTTCTACGACAGCATGCTTTACACTTACTCTTCGTGCCATCACCACCTTCACCTGCAATGGGTGGT GGATCGGATGCTCCAGCTCCAGTCCGAAATCCCTTCCCTTTCCAGCATAAACCAAACACGCTTGATCGCGACCGC ATTGTAGTGCCTGTCGGATGGGACAGCTGGGGTAAAATATCCGTCTTGAGAGAGGGCTTTGATGCCAAATTCTGG GGCGAGGCTTGGGAAAATGATCTTGAGGAAGTAGAGGGGCAAAGTAGTGGGGAAACAGGTGCCAAGAAGCTCTTC ACAGTTTTAGTCCCGGACCAAGGCGAAAAGCCTCGCATTCTTCCACCCATCAACAATCCAATGCCAGAACAAACG TTCCTTATGAAGCACTACGACGAAAACTCTAAGAAAGCCGATAGAGACCCTCGCGCTTCGTTCAGGAATCCGACG GATCTAACCACAGGTGCTCCTGTGGGTATCGTTGGCCCTCTTGGAAGCAGCAGCTTCAGCATGCCCAATGTCGAA CGTGTACTCAATGATATGGAGAACTCGACGATTGCGGCTTCGAATGCGGCCAATCAGGCTGCCGAAGCGCGCAAA TTCCCTAATCGGCCTACGGGAAGGCCGGGTGGGATTGCGGGGCTCAATGCATCCACCAACGCGACGCCATCTGCT CGTACTCCCACATCGCCTCCCACAACGAGTCCTACTGGTGGACAACCAAGTCAACATGAAGTTTTGCAGCATTTC TTCCAGAGCCTACTGAGCTCCAAAGACCGTGCTGGAGGAAAAGATCGCAACGCGGCCAATACGTCGCCGCCAGCG AAGACCAATGGGCAGACAGAAGAATAG
Gene	>Agabi119p4\|067670 ATGGATAATTCGCGTTCAACAACGCCGGAAGCACTACCCGAAAATCTCTGGTCATCTATCTTAGATTCTGTGTCG ACATCCCGCTCTCTTCCCTCAAAACAAATCCTGCTTCTTGGACAACCCTCAACCGGAAAGTCGACAATCGCATCT GCACTGCTACAGAGACCTGTATCTTCTGAAGAAAGTCAGGATGATAAGAGGGTGGACTTTGCCGTTGGTTATGAA TTTGCTGACGTTAGGGACGACGGTGATGAAGGTGCGTCGCGGCTGCACGATCGGGTCAGACGGGATTTTGCAGCT CAAACATCAGTACAGATACTATAGCGCGGTTATCGGTCTATACCGTGCCGTCGTCAAATTCATCATATACAACAC TGTTGCCACATTTTCTGCATCCAAGAACGGCACTAACACACTCGTTGGTGATGATCGTACTAGATTGGACGCGAC CATGGTCGTTTGTGGAGGAACTACAGACTTGGTTACTATGGATTGAACGATGGGTTAAAGGAGATGGCTCCAGAG AACTTGAGATGGTGCGCGAAGAGTGCCGTGAGCGATGTAAGTACAAATGTGATGGTGTCCTGTTACCGAGAAAGA TTAATGAGGCCACAGTACAGTCATATCTGCAACATTATTCTGAGCCGTCTACTGATCTGCTGCCTGCATCTACCT CTGCATTGAGTAACACCGTCTTACCCCTTGGCCCAGGTACATTGACACACAATACTGCGGGCGTGCCAATAATTG TTGTGTGTAGCAAGGCAGATTTGATAGACGAAGAAAATGATGTGGTTGCTAGTGCTGCAGGTATGGGTGGCATGG TCAAAGGGAAGGGTGGTGAGTGGGAGGAGCGAACGGACGGGATCATGCAGGTTCTACGGACGATCTGCCTTAAGT GTAAGCAGCCCCTCTTTCGCACCCGAACGGTTACTGACTTTATGTTTACAGATGGTGCATCACTATTCTACACGA CCCCTCAACCCACCACTCTCCAGGTTCTACGACAGCATGCTTTACACTTACTCTTCGTGCCATCACCACCTTCAC CTGCAATGGGTGGTGGATCGGATGCTCCAGCTCCAGTCCGAAATCCCTTCCCTTTCCAGCATAAACCAAACACGC TTGATCGCGACCGCATTGTAGTGCCTGTCGGATGGGACAGCTGGGGTAAAATATCCGTCTTGAGAGAGGGCTTTG ATGCCAAATTCTGGGGCGAGGCTTGGGAAAATGATCTTGAGGAAGTAGAGGGGCAAAGTAGTGGGGAAACAGGTG CCAAGAAGCTCTTCACAGTTTTAGTCCCGGACCAAGGCGAAAAGGTACATTTTAAGAATTGTTTCTTTACTATTG CTTAACGATGCCTCTGTGTAGCCTCGCATTCTTCCACCCATCAACAATCCAATGCCAGAACAAACGTTCCTTATG AAGCACTACGACGAAAACTCTAAGAAAGCCGATAGAGACCCTCGCGCTTCGTTCAGGAATCCGACGGATCTAACC ACAGGTGCTCCTGTGGGTATCGTTGGCCCTCTTGGAAGCAGCAGCTTCAGCATGCCCAATGTCGAACGTGTACTC AATGATATGGAGAACTCGACGATTGCGGCTTCGAATGCGGCCAATCAGGCTGCCGAAGCGCGCAAATTCCCTAAT CGGCCTACGGGAAGGCCGGGTGGGATTGCGGGGCTCAATGCATCCACCAACGCGACGCCATCTGCTCGTACTCCC ACATCGCCTCCCACAACGAGTCCTACTGGTGGACAACCAAGTCAACATGAAGTTTTGCAGCATTTCTTCCAGAGC CTACTGAGCTCCAAAGACCGTGCTGGAGGAAAAGATCGCAACGCGGCCAATACGTCGCCGCCAGCGAAGACCAAT GGGCAGACAGAAGAATAG

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