Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|067340
Gene name
Locationscaffold_04:663434..666065
Strand+
Gene length (bp)2631
Transcript length (bp)1662
Coding sequence length (bp)1662
Protein length (aa) 554

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03935 SKN1_KRE6_Sbg1 Beta-glucan synthesis-associated protein SKN1/KRE6/Sbg1 7.1E-161 73 553

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P87024|SKN1_CANAX Beta-glucan synthesis-associated protein SKN1 OS=Candida albicans GN=SKN1 PE=2 SV=1 71 550 2.0E-106
sp|P32486|KRE6_YEAST Beta-glucan synthesis-associated protein KRE6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRE6 PE=1 SV=2 74 553 4.0E-99
sp|P87023|KRE6_CANAX Beta-glucan synthesis-associated protein KRE6 OS=Candida albicans GN=KRE6 PE=2 SV=1 71 550 2.0E-97
sp|O13941|YEPB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C23H3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.11c PE=3 SV=1 77 553 4.0E-97
sp|P33336|SKN1_YEAST Beta-glucan synthesis-associated protein SKN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKN1 PE=1 SV=1 158 553 1.0E-90
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|P87024|SKN1_CANAX Beta-glucan synthesis-associated protein SKN1 OS=Candida albicans GN=SKN1 PE=2 SV=1 71 550 2.0E-106
sp|P32486|KRE6_YEAST Beta-glucan synthesis-associated protein KRE6 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=KRE6 PE=1 SV=2 74 553 4.0E-99
sp|P87023|KRE6_CANAX Beta-glucan synthesis-associated protein KRE6 OS=Candida albicans GN=KRE6 PE=2 SV=1 71 550 2.0E-97
sp|O13941|YEPB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C23H3.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC23H3.11c PE=3 SV=1 77 553 4.0E-97
sp|P33336|SKN1_YEAST Beta-glucan synthesis-associated protein SKN1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SKN1 PE=1 SV=1 158 553 1.0E-90
sp|O13789|YEOB_SCHPO Uncharacterized beta-glucan synthesis-associated protein C17G6.11c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC17G6.11c PE=3 SV=1 70 553 5.0E-87
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

Domain # Start End Length
1 103 125 22

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|067340
MSSPSTSPLRPGFMTTDSLSVFNHSSSFGELRRGSGTGSDSPYSFAFSARYSTLSEKYSLSPDPRSWGSNLSPDV
VEPDDSLHNPENSFNANGTRFAFSARGIANLGCLAMLSTVFLVLFIGYPIGMYATSKWPRSPGFNIGGINSTGQV
PSLGNFGLIDLDTPQDALFRKSLRDGEDWMLVFSDEFNTDGRSFYPGDDPYWEAADLHYWATNNLEWYDPAAVTT
VNGSLVITFSEIPSHGLDFQGGLISSWNKFCFTGGLFEAAVQLPGINNVVGMWPAIWTMGNLGRAGYGATLEGMW
PYTYDTCDVGTAPNQTINGLPIAATINGVHVMVMTTPDQNILMDRGIPLSGEVSQSAQWAPFDESYLWDNSTANL
VITDPSISAINGFVGNVIQEASSVVTKTNQRCYELVEDCYSIYAFEYRPGYDDAYITWVSDSQISWTLNSGGVGA
NAAVEISARPVPQEPMYMIINLGMSKNFGTVDFSHLTFPNHLRVDYVRVYQPMNKVNIGCNPPEFPTQNYIDAHL
EAYSNPNLTTWRGDYGKPFPRNKLLETC*
Coding >Agabi119p4|067340
ATGTCCTCCCCCTCCACCTCCCCCCTCCGTCCCGGCTTCATGACCACCGACTCTCTCAGCGTCTTCAATCACAGC
TCCAGCTTTGGCGAGCTACGACGCGGCAGCGGCACCGGCAGTGACTCGCCGTATTCCTTTGCCTTCAGCGCACGC
TACAGCACTCTTTCAGAAAAATACTCTCTTTCACCAGATCCCCGGTCGTGGGGCTCAAATTTATCGCCAGACGTT
GTTGAACCGGACGACTCGCTCCACAACCCAGAAAACTCATTCAACGCCAATGGCACACGCTTTGCATTTTCGGCG
CGAGGCATCGCCAATCTCGGCTGTCTTGCCATGCTCAGTACTGTCTTTCTCGTTCTCTTTATTGGGTATCCCATA
GGCATGTATGCCACCTCCAAGTGGCCCAGAAGTCCAGGCTTTAATATTGGCGGCATTAACTCAACGGGGCAGGTC
CCCTCCTTGGGTAATTTCGGTCTCATAGACCTAGACACTCCCCAAGACGCTCTTTTCAGAAAGTCACTTCGAGAC
GGAGAGGACTGGATGCTTGTATTTTCCGATGAATTTAATACTGATGGCCGATCATTTTATCCCGGCGATGACCCA
TATTGGGAGGCCGCGGATTTGCATTATTGGGCGACCAACAACTTGGAGTGGTATGACCCCGCTGCTGTCACAACT
GTCAATGGCTCCTTGGTTATCACTTTCTCCGAAATTCCGTCTCACGGCCTCGATTTCCAAGGAGGTCTCATCTCC
TCATGGAACAAGTTTTGTTTCACCGGAGGGCTATTTGAAGCTGCTGTACAGCTCCCGGGAATTAATAATGTCGTC
GGCATGTGGCCCGCCATCTGGACAATGGGGAATCTCGGCCGCGCCGGATACGGAGCCACACTAGAGGGAATGTGG
CCATATACATATGACACATGCGACGTAGGAACCGCACCGAACCAAACAATAAATGGGCTTCCGATCGCTGCCACC
ATAAACGGTGTACATGTGATGGTGATGACCACCCCGGACCAAAACATCCTGATGGATCGTGGAATCCCATTGAGC
GGTGAAGTTTCGCAATCCGCGCAGTGGGCTCCTTTTGATGAATCATATCTTTGGGACAACTCGACCGCGAATCTG
GTCATTACCGATCCGAGTATCTCAGCAATAAATGGTTTCGTAGGAAACGTTATCCAGGAGGCTTCCTCAGTGGTA
ACAAAAACAAACCAACGATGCTATGAACTAGTCGAAGACTGCTATTCCATCTATGCCTTCGAGTACAGACCAGGC
TATGACGATGCATACATTACATGGGTATCCGATAGCCAAATTTCATGGACACTCAACTCAGGTGGCGTCGGTGCG
AATGCGGCGGTCGAGATATCCGCAAGGCCTGTACCACAGGAACCTATGTACATGATTATTAACCTTGGCATGTCC
AAAAACTTTGGTACCGTGGATTTCAGCCACCTCACCTTTCCGAACCATCTCCGCGTGGATTACGTGCGAGTGTAC
CAACCTATGAATAAGGTTAATATTGGATGCAACCCACCTGAATTTCCTACGCAAAATTACATTGATGCACACCTT
GAGGCTTATTCGAACCCGAATTTGACGACTTGGAGAGGTGATTATGGAAAACCGTTTCCGAGAAACAAGTTGTTA
GAAACCTGTTAA
Transcript >Agabi119p4|067340
ATGTCCTCCCCCTCCACCTCCCCCCTCCGTCCCGGCTTCATGACCACCGACTCTCTCAGCGTCTTCAATCACAGC
TCCAGCTTTGGCGAGCTACGACGCGGCAGCGGCACCGGCAGTGACTCGCCGTATTCCTTTGCCTTCAGCGCACGC
TACAGCACTCTTTCAGAAAAATACTCTCTTTCACCAGATCCCCGGTCGTGGGGCTCAAATTTATCGCCAGACGTT
GTTGAACCGGACGACTCGCTCCACAACCCAGAAAACTCATTCAACGCCAATGGCACACGCTTTGCATTTTCGGCG
CGAGGCATCGCCAATCTCGGCTGTCTTGCCATGCTCAGTACTGTCTTTCTCGTTCTCTTTATTGGGTATCCCATA
GGCATGTATGCCACCTCCAAGTGGCCCAGAAGTCCAGGCTTTAATATTGGCGGCATTAACTCAACGGGGCAGGTC
CCCTCCTTGGGTAATTTCGGTCTCATAGACCTAGACACTCCCCAAGACGCTCTTTTCAGAAAGTCACTTCGAGAC
GGAGAGGACTGGATGCTTGTATTTTCCGATGAATTTAATACTGATGGCCGATCATTTTATCCCGGCGATGACCCA
TATTGGGAGGCCGCGGATTTGCATTATTGGGCGACCAACAACTTGGAGTGGTATGACCCCGCTGCTGTCACAACT
GTCAATGGCTCCTTGGTTATCACTTTCTCCGAAATTCCGTCTCACGGCCTCGATTTCCAAGGAGGTCTCATCTCC
TCATGGAACAAGTTTTGTTTCACCGGAGGGCTATTTGAAGCTGCTGTACAGCTCCCGGGAATTAATAATGTCGTC
GGCATGTGGCCCGCCATCTGGACAATGGGGAATCTCGGCCGCGCCGGATACGGAGCCACACTAGAGGGAATGTGG
CCATATACATATGACACATGCGACGTAGGAACCGCACCGAACCAAACAATAAATGGGCTTCCGATCGCTGCCACC
ATAAACGGTGTACATGTGATGGTGATGACCACCCCGGACCAAAACATCCTGATGGATCGTGGAATCCCATTGAGC
GGTGAAGTTTCGCAATCCGCGCAGTGGGCTCCTTTTGATGAATCATATCTTTGGGACAACTCGACCGCGAATCTG
GTCATTACCGATCCGAGTATCTCAGCAATAAATGGTTTCGTAGGAAACGTTATCCAGGAGGCTTCCTCAGTGGTA
ACAAAAACAAACCAACGATGCTATGAACTAGTCGAAGACTGCTATTCCATCTATGCCTTCGAGTACAGACCAGGC
TATGACGATGCATACATTACATGGGTATCCGATAGCCAAATTTCATGGACACTCAACTCAGGTGGCGTCGGTGCG
AATGCGGCGGTCGAGATATCCGCAAGGCCTGTACCACAGGAACCTATGTACATGATTATTAACCTTGGCATGTCC
AAAAACTTTGGTACCGTGGATTTCAGCCACCTCACCTTTCCGAACCATCTCCGCGTGGATTACGTGCGAGTGTAC
CAACCTATGAATAAGGTTAATATTGGATGCAACCCACCTGAATTTCCTACGCAAAATTACATTGATGCACACCTT
GAGGCTTATTCGAACCCGAATTTGACGACTTGGAGAGGTGATTATGGAAAACCGTTTCCGAGAAACAAGTTGTTA
GAAACCTGTTAA
Gene >Agabi119p4|067340
ATGTCCTCCCCCTCCACCTCCCCCCTCCGTCCCGGCTTCATGACCACCGACTCTCTCAGCGTCTTCAATCACAGC
TCCAGCTTTGGCGAGCTACGACGCGGCAGCGGCGTATATATATATTATTTTATTTTGCCTTTGGTTTCCTGACCT
TGGCTCTCCTCAGACCGGCAGTGACTCGCCGTATTCCTTTGCCTTCAGCGCACGCTACAGCACTCTTTCAGAAAA
AGTATGCTCCTCCTCGGCCAATTGATCCCTCCGCTCATTGTTCCAAGTACTCTCTTTCACCAGATCCCCGGTCGT
GGGGCTCAAATTTATCGCCAGACGTTGTTGAACCGGACGACTCGCTCCACAACCCAGAAAACTCATTCAACGCCA
ATGGCACACGCTTTGCATTTTCGGCGCGAGGCATCGCCAATCTCGGCTGTCTTGCCATGCTCAGTACTGTCTTTC
TCGTTCTCTTGTAAGCCCAGCGTCAACCCACAAATATCAATGCATTAACCTATACTTTAATTAGTATTGGGTATC
CCATAGGCATGTATGCCACCTCCAAGTGGCCCAGAAGTCCAGGCTTTAATATTGGCGGCATTAACTCAACGGGGC
AGGTAATCTATTTTTGTCACAACACCTCGAAACTCTATTCTTATCTTCTGTTCTCGTCCTCGAATGTACCCCCTC
CCAGGTCCCCTCCTTGGGTAATTTCGGTCTCATAGACCTAGACACTCCCCAAGACGCTCTTTTCAGAAAGTCACT
TCGAGACGGAGAGGACTGGATGCTTGTATTTTCCGATGAATTTAATACTGATGGCCGATCATTTTATCCCGGCGA
TGACCCATATTGGGAGGCCGCGGATTTGCATTATTGGGTGAGTCTTCTTATTAAAAACATCATGCTCCAAGGCAA
TGTATCATCTCCTGCCAGGCGACCAACAACTTGGAGTGGTATGACCCCGCTGCTGTCACAACTGTCAATGGCTCC
TTGGTTATCACTTTCTCCGAAATTCCGTCTCACGGCCTCGATTTCCAAGGAGGTACGTTTCATCGAAAGCGTTAA
ATCCGCATGTTTAAAACCCCGCATACACAGGTCTCATCTCCTCATGGTAATTGTTTTTGATTTCCGGAACTGTGA
CTGATAATGACTGAAATCGGACTAAAGGAACAAGTTTTGTTTCACCGGAGGGCTATTTGAAGCTGCTGTACAGCT
CCCGGGAATTAATAATGTCGTCGGCATGTGGCCCGCCATCTGGACAATGGGGAATCTCGGCCGCGCCGGATACGG
AGCCACACTAGAGGGAATGGTAGATCTCCATTTCACTTTTCCGCTTTTATGTCCTCGCCATTCAAACTCAGCTTT
CAGTGGCCATATACATATGACACATGCGACGTAGGAACCGCACCGAACCAAACAATAAATGGGCTTCCGATCGCT
GCCACCATAAACGGTGATCACCTTTATAATGACGCACTTTCTTATTTGCCGGGTCAGAGGCTTTCGAGGTGTACA
TGTGATGGTGATGACCACCCCGGACCAAAACATCCTGATGGATCGTATGTCGGCAGATCTTCACCCGAGATTGAC
ATGTTCGAAGCCCAGATAGGTGGAATCCCATTGAGCGGTGAAGTTTCGCAATCCGCGCAGTGGGCTGTAAGCAAA
TCTTTTTATGATTTTGAGAGGAAGATGTTTCTGACAATGCGAGATATAGCCTTTTGATGAATCATATCTTTGGGA
CAACTCGACCGCGAATCTGGTCATTACCGATCCGAGTATCTCAGCAATAAATGGTTTCGTAGGAAACGTTATCCA
GGAGGCTTCCTCAGTGGTAACAAAAACAAACCAACGATGCTATGAACTAGTCGAAGACTGCTATTCCATCTATGC
CTTCGAGGTAACGTACCATTTTCTATTGTCTCGGAAACTATTGCTAACTGCGTTCTAGTACAGACCAGGTATGTG
ATTTAACATTCTTGGCGTGTGACGCCGGTAATCAATTACCCCCTGTTTTAACGAATAGGCTATGACGATGCAGTA
CGTTCTGTCTCGTAAAATTTATCGCCACTAATCTGACCTTGAAATAATCAAGTACATTACATGGGTATCCGATAG
CCAAATTTCATGGACACTCAACTCAGGTGGCGTCGGTGCGAATGCGGCGGTCGAGATATCCGCAAGGCCTGTACC
ACAGGAACCTATGGTACGTTTTCCGATCTGATCTGATGAAATCCTGTTTATGGAAGGTTCAAAACGCACACAGTA
CATGATTATTAACCTTGGCATGTCCAAAAACTTTGGTACCGTGGATTTCAGCCACCTCACCTTTCCGAACCATCT
CCGCGTGGATTACGTGCGAGTGTACCAACCTATGAATAAGGTTAATATTGGATGCAACCCACCTGAATTTCCTAC
GCAAAATTACATTGATGCGTGAGTTTTTTTTTAATTTTTCGTTGTTTCTTCCTTTCATGACACTTGTTCATTTAC
CATTACATGCTGGGTATGCATGGTTCTGTATCCACATATCACTTACGAACCGCAATGTACAGACACCTTGAGGCT
TATTCGAACCCGAATTTGACGACTTGGAGAGGTGATTATGGAAAACCGTTTCCGAGAAACAAGTTGTTAGAAACC
TGTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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