Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|065410
Gene name
Locationscaffold_03b:1212566..1214575
Strand+
Gene length (bp)2009
Transcript length (bp)1728
Coding sequence length (bp)1728
Protein length (aa) 576

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01565 FAD_binding_4 FAD binding domain 3.5E-20 130 271
PF08031 BBE Berberine and berberine like 1.1E-07 520 562

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|D4B1Z7|A2478_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 27 565 4.0E-93
sp|D4AS41|A7056_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 1 573 9.0E-91
sp|Q9FZC6|FOX3_ARATH Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 130 556 1.0E-10
sp|P08159|HDNO_ARTOX 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 137 341 2.0E-08
sp|Q9FZC4|FOX1_ARATH Flavin-dependent oxidoreductase FOX1 OS=Arabidopsis thaliana GN=FOX1 PE=2 SV=1 130 317 7.0E-07
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|D4B1Z7|A2478_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02478 PE=1 SV=1 27 565 4.0E-93
sp|D4AS41|A7056_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02478 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_07056 PE=1 SV=2 1 573 9.0E-91
sp|Q9FZC6|FOX3_ARATH Flavin-dependent oxidoreductase FOX3 OS=Arabidopsis thaliana GN=FOX3 PE=3 SV=1 130 556 1.0E-10
sp|P08159|HDNO_ARTOX 6-hydroxy-D-nicotine oxidase OS=Arthrobacter oxydans PE=1 SV=2 137 341 2.0E-08
sp|Q9FZC4|FOX1_ARATH Flavin-dependent oxidoreductase FOX1 OS=Arabidopsis thaliana GN=FOX1 PE=2 SV=1 130 317 7.0E-07
sp|O06997|YVDP_BACSU Uncharacterized FAD-linked oxidoreductase YvdP OS=Bacillus subtilis (strain 168) GN=yvdP PE=1 SV=1 247 562 4.0E-06
sp|Q9FZC8|FOX5_ARATH Flavin-dependent oxidoreductase FOX5 OS=Arabidopsis thaliana GN=FOX5 PE=3 SV=1 130 317 4.0E-06
sp|D4B1P2|A2372_ARTBC Uncharacterized FAD-linked oxidoreductase ARB_02372 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02372 PE=1 SV=1 131 311 5.0E-06
sp|Q9FZC7|FOX4_ARATH Flavin-dependent oxidoreductase FOX4 OS=Arabidopsis thaliana GN=FOX4 PE=2 SV=1 130 317 8.0E-06
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GO

GO Term Description Terminal node
GO:0016491 oxidoreductase activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0097159 organic cyclic compound binding No
GO:1901363 heterocyclic compound binding No
GO:0043167 ion binding No
GO:0003824 catalytic activity No
GO:0000166 nucleotide binding No
GO:0043168 anion binding No
GO:1901265 nucleoside phosphate binding No
GO:0005488 binding No
GO:0003674 molecular_function No
GO:0036094 small molecule binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 19 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|065410
MRLHALLDFIPFLSLVLAQSKEDVKCRCLYGEPCWPTEQDFTSLTSHLSQPLLRPVPPATACYPIDNPSGNCSDA
QSHRRDSIWRADQPGAYENINFESHLFQNGSISACYLNTTLGIPCEQGNVPPIGVDARTVEDVQAAVKFAGQHNL
RLVVKNTGHDYLGRSSGRNAFMIWTHHLKNITYNAEFIPEGGSKDDAIFGLTVGAGVQWYEAYTAAAQNNRFVVG
GISATGSNGAAGGWIMGGGHSAFSPKFGLGVDNAVEFTIVKPNGDYAVANSHHNQDLFWALRGGGAGSWGVVISV
TYKTHDLLPMILSVLNVTFPTLDAATSVATELVGLFPKLSDLGWGGYGALSNTSLLMGFMSPNVSWADVNSTILP
FFDFAVNATQDPNALATTIPFANPYELINPSDDAGLQNAQEVGGLVELASRLLSRNAAEQRAEETARLLLSFDFV
GINFVAGGAVGLAEPDSVALNPGWRKAVAHVYTSGNWEEGTSAETIKEIQRGVARHVRALDPISPDSTTYMNEAS
LYEPDFKKSFFGDHYDKLRAIKQIYDPNSLFVVAEGVASDEWDDTLTCPR*
Coding >Agabi119p4|065410
ATGAGACTCCACGCTTTGCTCGACTTCATACCCTTCCTCTCCCTTGTGCTCGCGCAGTCGAAGGAAGATGTTAAA
TGTCGATGTCTGTATGGCGAACCTTGTTGGCCTACTGAGCAAGACTTTACCTCTCTTACCTCCCATCTGTCCCAA
CCCCTCCTCCGTCCCGTACCTCCCGCTACTGCTTGCTATCCCATTGACAACCCATCTGGTAACTGTTCCGACGCA
CAGAGCCATCGGCGTGACTCGATCTGGCGTGCTGACCAACCTGGTGCATACGAGAATATCAATTTCGAGTCTCAC
CTCTTCCAAAACGGTTCTATCAGTGCTTGTTATCTCAACACTACCCTCGGAATTCCATGTGAGCAGGGGAATGTT
CCTCCCATTGGCGTCGATGCTAGGACGGTGGAAGATGTACAAGCAGCGGTGAAGTTTGCTGGCCAGCACAACCTC
CGGCTGGTCGTCAAGAATACAGGACATGATTATCTCGGCCGTAGCTCTGGACGGAACGCTTTCATGATTTGGACA
CATCATTTGAAGAACATAACTTATAACGCCGAATTTATCCCAGAAGGCGGTTCGAAGGACGATGCTATTTTCGGC
TTGACTGTGGGCGCTGGTGTTCAATGGTATGAAGCCTACACTGCTGCTGCTCAGAACAACCGCTTTGTCGTTGGC
GGTATATCTGCAACAGGGTCTAATGGAGCTGCAGGCGGTTGGATCATGGGTGGTGGTCACAGCGCATTCTCTCCA
AAATTTGGCCTAGGAGTGGACAACGCTGTCGAGTTCACTATTGTGAAACCGAATGGTGATTATGCCGTTGCCAAC
TCTCACCATAACCAAGACCTCTTCTGGGCGCTGAGAGGCGGTGGTGCAGGTTCTTGGGGAGTCGTCATTTCTGTG
ACCTACAAAACACACGATTTACTTCCAATGATTTTGTCCGTTCTCAATGTCACCTTCCCTACCCTGGATGCTGCG
ACAAGTGTCGCCACGGAGCTCGTCGGGCTTTTCCCCAAGCTTTCCGACTTAGGCTGGGGAGGTTATGGAGCTCTT
TCAAATACGAGCCTATTAATGGGATTTATGTCCCCAAATGTCTCGTGGGCAGATGTCAATTCCACCATCCTTCCT
TTCTTTGATTTCGCCGTAAATGCTACTCAAGACCCCAATGCTCTCGCTACCACTATACCTTTTGCTAATCCTTAT
GAGCTCATCAATCCCAGCGATGATGCAGGGCTCCAGAACGCCCAGGAGGTCGGGGGCCTGGTAGAACTTGCATCC
CGGCTATTATCCCGCAATGCTGCCGAGCAGAGAGCAGAAGAGACAGCACGGCTTCTTTTGAGCTTTGATTTTGTT
GGTATCAATTTCGTTGCGGGTGGAGCTGTCGGGCTTGCTGAACCAGATTCCGTTGCTCTTAACCCGGGGTGGAGA
AAAGCTGTAGCTCATGTATACACGTCAGGGAATTGGGAAGAAGGTACTTCGGCTGAAACCATAAAAGAGATTCAG
CGAGGTGTTGCACGACATGTGAGAGCCTTGGATCCTATTTCTCCGGATTCAACAACCTACATGAACGAGGCATCG
TTATACGAGCCGGACTTCAAGAAGTCATTCTTTGGCGACCATTACGACAAATTAAGGGCCATTAAACAAATATAT
GACCCCAACTCGTTGTTCGTTGTCGCTGAAGGTGTAGCATCCGATGAGTGGGATGATACATTGACTTGCCCCCGA
TGA
Transcript >Agabi119p4|065410
ATGAGACTCCACGCTTTGCTCGACTTCATACCCTTCCTCTCCCTTGTGCTCGCGCAGTCGAAGGAAGATGTTAAA
TGTCGATGTCTGTATGGCGAACCTTGTTGGCCTACTGAGCAAGACTTTACCTCTCTTACCTCCCATCTGTCCCAA
CCCCTCCTCCGTCCCGTACCTCCCGCTACTGCTTGCTATCCCATTGACAACCCATCTGGTAACTGTTCCGACGCA
CAGAGCCATCGGCGTGACTCGATCTGGCGTGCTGACCAACCTGGTGCATACGAGAATATCAATTTCGAGTCTCAC
CTCTTCCAAAACGGTTCTATCAGTGCTTGTTATCTCAACACTACCCTCGGAATTCCATGTGAGCAGGGGAATGTT
CCTCCCATTGGCGTCGATGCTAGGACGGTGGAAGATGTACAAGCAGCGGTGAAGTTTGCTGGCCAGCACAACCTC
CGGCTGGTCGTCAAGAATACAGGACATGATTATCTCGGCCGTAGCTCTGGACGGAACGCTTTCATGATTTGGACA
CATCATTTGAAGAACATAACTTATAACGCCGAATTTATCCCAGAAGGCGGTTCGAAGGACGATGCTATTTTCGGC
TTGACTGTGGGCGCTGGTGTTCAATGGTATGAAGCCTACACTGCTGCTGCTCAGAACAACCGCTTTGTCGTTGGC
GGTATATCTGCAACAGGGTCTAATGGAGCTGCAGGCGGTTGGATCATGGGTGGTGGTCACAGCGCATTCTCTCCA
AAATTTGGCCTAGGAGTGGACAACGCTGTCGAGTTCACTATTGTGAAACCGAATGGTGATTATGCCGTTGCCAAC
TCTCACCATAACCAAGACCTCTTCTGGGCGCTGAGAGGCGGTGGTGCAGGTTCTTGGGGAGTCGTCATTTCTGTG
ACCTACAAAACACACGATTTACTTCCAATGATTTTGTCCGTTCTCAATGTCACCTTCCCTACCCTGGATGCTGCG
ACAAGTGTCGCCACGGAGCTCGTCGGGCTTTTCCCCAAGCTTTCCGACTTAGGCTGGGGAGGTTATGGAGCTCTT
TCAAATACGAGCCTATTAATGGGATTTATGTCCCCAAATGTCTCGTGGGCAGATGTCAATTCCACCATCCTTCCT
TTCTTTGATTTCGCCGTAAATGCTACTCAAGACCCCAATGCTCTCGCTACCACTATACCTTTTGCTAATCCTTAT
GAGCTCATCAATCCCAGCGATGATGCAGGGCTCCAGAACGCCCAGGAGGTCGGGGGCCTGGTAGAACTTGCATCC
CGGCTATTATCCCGCAATGCTGCCGAGCAGAGAGCAGAAGAGACAGCACGGCTTCTTTTGAGCTTTGATTTTGTT
GGTATCAATTTCGTTGCGGGTGGAGCTGTCGGGCTTGCTGAACCAGATTCCGTTGCTCTTAACCCGGGGTGGAGA
AAAGCTGTAGCTCATGTATACACGTCAGGGAATTGGGAAGAAGGTACTTCGGCTGAAACCATAAAAGAGATTCAG
CGAGGTGTTGCACGACATGTGAGAGCCTTGGATCCTATTTCTCCGGATTCAACAACCTACATGAACGAGGCATCG
TTATACGAGCCGGACTTCAAGAAGTCATTCTTTGGCGACCATTACGACAAATTAAGGGCCATTAAACAAATATAT
GACCCCAACTCGTTGTTCGTTGTCGCTGAAGGTGTAGCATCCGATGAGTGGGATGATACATTGACTTGCCCCCGA
TGA
Gene >Agabi119p4|065410
ATGAGACTCCACGCTTTGCTCGACTTCATACCCTTCCTCTCCCTTGTGCTCGCGCAGTCGAAGGAAGATGTTAAA
TGTCGATGTCTGTATGGCGAACCTTGTTGGCCTACTGAGCAAGACTTTACCTCTCTTACCTCCCATCTGTCCCAA
CCCCTCCTCCGTCCCGTACCTCCCGCTACTGCTTGCTATCCCATTGACAACCCATCTGGTAACTGTTCCGACGCA
CAGAGCCATCGGCGTGACTCGATCTGGCGTGCTGACCAACCTGGTGCATACGAGAATATCAATTTCGAGTCTCAC
CTCTTCCAAAACGGTTCTATCAGTGCTTGTTATCTCAACACTACCCTCGGAATTCCATGTGAGCAGGGGAATGTT
CCTCCCATTGGCGTCGATGCTAGGACGGTGGAAGATGTACAAGCAGCGGTGAAGTTTGCTGGCCAGCACAACCTC
CGGCTGGTCGTCAAGAATACAGGGTAAGTCCATTTGAGTATCTTCACTGTAAAGTTGTTGATCCATCGACTTTAT
TTGCCTTTAGACATGATTATCTCGGCCGTAGCTCTGGACGGAACGCTTTCATGATTTGGACACATCATTTGAAGA
ACATAACTTATAACGCCGAATTTATCCCAGAAGGCGGTTCGAAGGACGATGCTATTTTCGGTTCGTCCGATCCGG
CCAGCTCCTCTTTTCTATAACCTAATTGTTCGATGATAAACAGGCTTGACTGTGGGCGCTGGTGTTCAATGGTAT
GAAGCCTACACTGCTGCTGCTCAGAACAACCGCTTTGTCGTTGGCGGTATATCTGCAACAGGGTCTAATGGAGCT
GCAGGCGGTTGGATCATGGGTGGTGGTCACAGCGCATTCTCTCCAAAATTTGGCCTAGGTGAGTTCAACACAGAT
GCCTTGAAATCAGATGCATTGCTGACTGAGGTTGTGCAGGAGTGGACAACGCTGTCGAGTTCACTATTGTGAAAC
CGAATGGTGATTATGCCGTTGCCAACTCTCACCATAACCAAGACCTCTTCTGGGCGCTGAGAGGCGGTGGTGCAG
GTTCTTGGGGAGTCGTCATTTCTGTGACCTACAAAACACACGATTTACTTCCAATGATTTTGTCCGTTCTCAATG
TCACCTTCCCTACCCTGGATGCTGCGACAAGTGTCGCCACGGAGCTCGTCGGGCTTTTCCCCAAGCTTTCCGACT
TAGGCTGGGGAGGTTATGGAGCTCTTTCAAATACGAGCCTATTAATGGGATTTATGTCCCCAAATGTCTCGTGGG
CAGATGTCAATTCCACCATCCTTCCTTTCTTTGATTTCGCCGTAAATGCTACTCAAGACCCCAATGCTCTCGCTA
CCACTATACCTTTTGCTAATCCTTATGAGCTCATCAATCCCAGCGATGATGCAGGGCTCCAGAACGCCCAGGAGG
TCGGGGGCCTGGTAGAACTTGCATCCCGGCTATTATCCCGCAATGCTGCCGAGCAGAGAGCAGAAGAGACAGCAC
GGCTTCTTTTGAGCTTTGATTTTGTTGGTATCAAGTACGCAAATTTACCTATCACAGAAAATTTTAAATAACGGC
ATCTTATAATAGTTTCGTTGCGGGTGGAGCTGTCGGGCTTGCTGAACCAGATTCCGTTGCTCTTAACCCGGGGTG
GAGAAAAGCTGTAGCTCATGTATACACGTCAGGGAATTGGGAAGAAGGTACTTCGGCTGAAACCATAAAAGAGAT
TCAGCGAGGTGTTGCACGACATGTGAGAGCCTTGGATCCTATTTCTCCGGATTCAACAACCTACATGAACGAGGT
AAAGTATTTCCATGCTAGTGTTTAATGCCAATTTATAACCCTCATCGCAGGCATCGTTATACGAGCCGGACTTCA
AGAAGTCATTCTTTGGCGACCATTACGACAAATTAAGGGCCATTAAACAAATATATGACCCCAACTCGTTGTTCG
TTGTCGCTGAAGGTGTAGCATCCGATGAGTGGGATGATACATTGACTTGCCCCCGATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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