© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|064780 |
| Gene name | |
| Location | scaffold_03b:1051609..1053179 |
| Strand | + |
| Gene length (bp) | 1570 |
| Transcript length (bp) | 1410 |
| Coding sequence length (bp) | 1410 |
| Protein length (aa) | 470 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00481 | PP2C | Protein phosphatase 2C | 1.1E-22 | 181 | 372 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14189|PP2C5_SCHPO | Protein phosphatase 2C homolog C10F6.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC10F6.17c PE=3 SV=4 | 99 | 469 | 9.0E-41 |
| sp|Q5RA52|PDP1_PONAB | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Pongo abelii GN=PDP1 PE=2 SV=1 | 155 | 468 | 3.0E-23 |
| sp|Q9P0J1|PDP1_HUMAN | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Homo sapiens GN=PDP1 PE=1 SV=3 | 155 | 468 | 3.0E-23 |
| sp|Q3UV70|PDP1_MOUSE | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Mus musculus GN=Pdp1 PE=1 SV=1 | 155 | 468 | 6.0E-23 |
| sp|O88483|PDP1_RAT | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Rattus norvegicus GN=Pdp1 PE=1 SV=1 | 155 | 468 | 7.0E-23 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14189|PP2C5_SCHPO | Protein phosphatase 2C homolog C10F6.17c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC10F6.17c PE=3 SV=4 | 99 | 469 | 9.0E-41 |
| sp|Q5RA52|PDP1_PONAB | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Pongo abelii GN=PDP1 PE=2 SV=1 | 155 | 468 | 3.0E-23 |
| sp|Q9P0J1|PDP1_HUMAN | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Homo sapiens GN=PDP1 PE=1 SV=3 | 155 | 468 | 3.0E-23 |
| sp|Q3UV70|PDP1_MOUSE | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Mus musculus GN=Pdp1 PE=1 SV=1 | 155 | 468 | 6.0E-23 |
| sp|O88483|PDP1_RAT | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Rattus norvegicus GN=Pdp1 PE=1 SV=1 | 155 | 468 | 7.0E-23 |
| sp|P35816|PDP1_BOVIN | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Bos taurus GN=PDP1 PE=1 SV=1 | 155 | 468 | 2.0E-22 |
| sp|Q12511|PDP1_YEAST | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PTC5 PE=1 SV=1 | 100 | 468 | 5.0E-21 |
| sp|Q9P2J9|PDP2_HUMAN | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Homo sapiens GN=PDP2 PE=2 SV=2 | 158 | 468 | 1.0E-19 |
| sp|O88484|PDP2_RAT | [Pyruvate dehydrogenase [acetyl-transferring]]-phosphatase 2, mitochondrial OS=Rattus norvegicus GN=Pdp2 PE=2 SV=1 | 155 | 468 | 2.0E-19 |
| sp|Q5PNS9|P2C64_ARATH | Probable protein phosphatase 2C 64 OS=Arabidopsis thaliana GN=At4g38520 PE=2 SV=1 | 154 | 366 | 8.0E-11 |
| sp|Q94CL8|P2C48_ARATH | Probable protein phosphatase 2C 48 OS=Arabidopsis thaliana GN=PP2C6 PE=2 SV=1 | 215 | 389 | 6.0E-10 |
| sp|Q7Y138|P2C36_ORYSJ | Probable protein phosphatase 2C 36 OS=Oryza sativa subsp. japonica GN=Os03g0832400 PE=2 SV=1 | 122 | 366 | 7.0E-10 |
| sp|Q10S32|P2C28_ORYSJ | Probable protein phosphatase 2C 28 OS=Oryza sativa subsp. japonica GN=Os03g0137200 PE=2 SV=1 | 163 | 382 | 4.0E-09 |
| sp|Q2QN36|P2C78_ORYSJ | Probable protein phosphatase 2C 78 OS=Oryza sativa subsp. japonica GN=Os12g0580900 PE=2 SV=1 | 101 | 366 | 8.0E-09 |
| sp|Q3EAF9|P2C49_ARATH | Probable protein phosphatase 2C 49 OS=Arabidopsis thaliana GN=At3g62260 PE=2 SV=1 | 157 | 374 | 2.0E-08 |
| sp|Q501F9|P2C67_ARATH | Probable protein phosphatase 2C 67 OS=Arabidopsis thaliana GN=At5g02760 PE=2 SV=1 | 96 | 366 | 3.0E-08 |
| sp|Q10NB9|P2C31_ORYSJ | Probable protein phosphatase 2C 31 OS=Oryza sativa subsp. japonica GN=Os03g0275100 PE=2 SV=1 | 220 | 373 | 9.0E-08 |
| sp|Q8H063|P2C29_ORYSJ | Probable protein phosphatase 2C 29 OS=Oryza sativa subsp. japonica GN=Os03g0207400 PE=2 SV=1 | 216 | 366 | 9.0E-08 |
| sp|Q84T94|P2C35_ORYSJ | Protein phosphatase 2C 35 OS=Oryza sativa subsp. japonica GN=XB15 PE=1 SV=1 | 216 | 371 | 2.0E-07 |
| sp|Q6Z8B9|P2C12_ORYSJ | Probable protein phosphatase 2C 12 OS=Oryza sativa subsp. japonica GN=Os02g0224100 PE=2 SV=1 | 195 | 366 | 3.0E-07 |
| sp|Q94H98|P2C34_ORYSJ | Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. japonica GN=BIPP2C2 PE=2 SV=1 | 163 | 383 | 3.0E-07 |
| sp|Q5MFV5|P2C34_ORYSI | Probable protein phosphatase 2C 34 OS=Oryza sativa subsp. indica GN=BIPP2C2 PE=2 SV=2 | 163 | 383 | 3.0E-07 |
| sp|Q9CAJ0|P2C16_ARATH | Protein phosphatase 2C 16 OS=Arabidopsis thaliana GN=HAB1 PE=1 SV=1 | 160 | 362 | 6.0E-07 |
| sp|Q9LNW3|P2C03_ARATH | Protein phosphatase 2C 3 OS=Arabidopsis thaliana GN=AIP1 PE=1 SV=1 | 163 | 374 | 7.0E-07 |
| sp|Q9SR24|P2C36_ARATH | Probable protein phosphatase 2C 36 OS=Arabidopsis thaliana GN=PLL3 PE=2 SV=1 | 218 | 371 | 1.0E-06 |
| sp|Q84JD5|P2C68_ARATH | Probable protein phosphatase 2C 68 OS=Arabidopsis thaliana GN=At5g06750 PE=2 SV=1 | 216 | 382 | 2.0E-06 |
| sp|Q0V7V2|P2C42_ARATH | Probable protein phosphatase 2C 42 OS=Arabidopsis thaliana GN=At3g17090 PE=2 SV=1 | 145 | 366 | 3.0E-06 |
| sp|Q0JLP9|P2C06_ORYSJ | Probable protein phosphatase 2C 6 OS=Oryza sativa subsp. japonica GN=Os01g0583100 PE=1 SV=1 | 201 | 379 | 3.0E-06 |
| sp|Q9FIF5|P2C78_ARATH | Probable protein phosphatase 2C 78 OS=Arabidopsis thaliana GN=At5g59220 PE=2 SV=1 | 201 | 370 | 5.0E-06 |
| sp|Q7XHN8|P2C61_ORYSJ | Probable protein phosphatase 2C 61 OS=Oryza sativa subsp. japonica GN=Os07g0114000 PE=2 SV=1 | 163 | 378 | 6.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004722 | protein serine/threonine phosphatase activity | Yes |
| GO:0016787 | hydrolase activity | No |
| GO:0042578 | phosphoric ester hydrolase activity | No |
| GO:0140096 | catalytic activity, acting on a protein | No |
| GO:0004721 | phosphoprotein phosphatase activity | No |
| GO:0003824 | catalytic activity | No |
| GO:0016788 | hydrolase activity, acting on ester bonds | No |
| GO:0003674 | molecular_function | No |
| GO:0016791 | phosphatase activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 19 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|064780 MAWVTGRRSLLFLTGVASFGGSLYYRETNNRADNHQDDACNIPSKRTFDSFANHIWSGSPVDERNDKIVTRYSSA YLANKGIGFCSLGFHRIELAPQQNWTFGLLSEGFRGWETSAFIFRALIPTICAVLSLALGKNASRPGKEDLSTEP EPPITSEKIDMSIRKAFLDVDHGVVDQAPDMIISSPSQALNMVQLSAAVSGSTGMLAVYDESRRILKVANVGDAR AVLGRKALHENGMPCFEVHVLSSEHTSSNPSELARLQESHSDTDIKVLQEYVERDITRAFGLAMCKWSQSLQDRI YRDYLGESPLVNLLPRSTSDPENQQQPYLNAEPDIRTIHVRPGDFLVMASKGVWDSLANEEVIGLVGVWLARQNC NPRTPISHPSLEKIYDQNMLPVKFPEKWEDTTTWYQKMKIQKKYICVDTNVAAHLVRNALGGANQAFTEGVLRLP YPLSANSRGELAVMVLQFE* |
| Coding | >Agabi119p4|064780 ATGGCTTGGGTGACTGGGCGACGTTCTCTCCTTTTCTTGACAGGTGTTGCTTCATTTGGTGGATCCCTATACTAT CGAGAAACCAATAATCGCGCCGACAACCATCAGGATGATGCATGTAACATTCCATCCAAGAGAACGTTCGACTCA TTTGCGAATCATATATGGTCCGGCAGTCCGGTTGATGAACGGAACGATAAAATTGTTACCAGGTACAGCTCTGCC TATCTGGCCAATAAAGGGATTGGGTTTTGCAGTTTAGGTTTTCATCGTATCGAGTTGGCGCCTCAACAAAACTGG ACGTTTGGTCTTCTGAGCGAAGGTTTCAGAGGCTGGGAAACTAGCGCCTTCATATTCAGAGCCCTTATACCCACA ATATGTGCAGTGCTCAGTTTAGCGCTGGGTAAAAATGCCTCTCGCCCTGGTAAGGAGGATCTCTCCACAGAGCCC GAACCTCCAATCACCTCTGAAAAAATCGATATGTCGATCAGAAAGGCTTTTCTAGATGTTGACCATGGAGTGGTG GACCAGGCGCCAGACATGATCATATCATCTCCTTCTCAAGCTCTTAATATGGTCCAACTGTCTGCTGCTGTCTCA GGAAGCACCGGAATGTTGGCGGTATATGATGAGTCGAGGCGTATCCTCAAAGTTGCAAACGTTGGAGATGCACGC GCCGTCTTAGGCCGTAAAGCACTGCATGAAAACGGTATGCCATGCTTCGAGGTTCACGTCCTCAGTTCCGAACAC ACGTCTTCCAACCCTTCTGAACTGGCGCGCCTTCAGGAATCTCACTCCGACACTGACATAAAAGTTCTTCAGGAA TACGTTGAGCGGGACATCACTCGTGCATTCGGCTTAGCTATGTGTAAATGGAGCCAAAGCTTGCAGGACCGAATT TATCGAGATTATCTTGGCGAATCTCCATTAGTCAATCTTCTCCCTCGATCGACCTCTGATCCAGAGAATCAGCAG CAACCGTACCTCAATGCTGAACCCGATATAAGGACGATTCATGTCCGGCCTGGTGATTTTCTTGTCATGGCCAGC AAGGGTGTTTGGGATTCTCTTGCGAATGAGGAAGTCATTGGCCTCGTCGGCGTATGGTTGGCGCGACAGAACTGT AATCCCCGAACTCCGATTTCACACCCATCCTTGGAGAAAATTTATGATCAGAATATGTTACCTGTCAAGTTCCCT GAAAAATGGGAAGACACAACAACCTGGTACCAGAAGATGAAGATTCAGAAGAAATATATCTGCGTTGACACCAAC GTTGCAGCCCATCTTGTCCGTAATGCACTGGGAGGCGCGAACCAAGCCTTCACTGAAGGAGTTTTAAGGCTGCCA TACCCTTTGTCTGCAAATAGTCGTGGTGAATTGGCGGTGATGGTCCTTCAATTCGAATGA |
| Transcript | >Agabi119p4|064780 ATGGCTTGGGTGACTGGGCGACGTTCTCTCCTTTTCTTGACAGGTGTTGCTTCATTTGGTGGATCCCTATACTAT CGAGAAACCAATAATCGCGCCGACAACCATCAGGATGATGCATGTAACATTCCATCCAAGAGAACGTTCGACTCA TTTGCGAATCATATATGGTCCGGCAGTCCGGTTGATGAACGGAACGATAAAATTGTTACCAGGTACAGCTCTGCC TATCTGGCCAATAAAGGGATTGGGTTTTGCAGTTTAGGTTTTCATCGTATCGAGTTGGCGCCTCAACAAAACTGG ACGTTTGGTCTTCTGAGCGAAGGTTTCAGAGGCTGGGAAACTAGCGCCTTCATATTCAGAGCCCTTATACCCACA ATATGTGCAGTGCTCAGTTTAGCGCTGGGTAAAAATGCCTCTCGCCCTGGTAAGGAGGATCTCTCCACAGAGCCC GAACCTCCAATCACCTCTGAAAAAATCGATATGTCGATCAGAAAGGCTTTTCTAGATGTTGACCATGGAGTGGTG GACCAGGCGCCAGACATGATCATATCATCTCCTTCTCAAGCTCTTAATATGGTCCAACTGTCTGCTGCTGTCTCA GGAAGCACCGGAATGTTGGCGGTATATGATGAGTCGAGGCGTATCCTCAAAGTTGCAAACGTTGGAGATGCACGC GCCGTCTTAGGCCGTAAAGCACTGCATGAAAACGGTATGCCATGCTTCGAGGTTCACGTCCTCAGTTCCGAACAC ACGTCTTCCAACCCTTCTGAACTGGCGCGCCTTCAGGAATCTCACTCCGACACTGACATAAAAGTTCTTCAGGAA TACGTTGAGCGGGACATCACTCGTGCATTCGGCTTAGCTATGTGTAAATGGAGCCAAAGCTTGCAGGACCGAATT TATCGAGATTATCTTGGCGAATCTCCATTAGTCAATCTTCTCCCTCGATCGACCTCTGATCCAGAGAATCAGCAG CAACCGTACCTCAATGCTGAACCCGATATAAGGACGATTCATGTCCGGCCTGGTGATTTTCTTGTCATGGCCAGC AAGGGTGTTTGGGATTCTCTTGCGAATGAGGAAGTCATTGGCCTCGTCGGCGTATGGTTGGCGCGACAGAACTGT AATCCCCGAACTCCGATTTCACACCCATCCTTGGAGAAAATTTATGATCAGAATATGTTACCTGTCAAGTTCCCT GAAAAATGGGAAGACACAACAACCTGGTACCAGAAGATGAAGATTCAGAAGAAATATATCTGCGTTGACACCAAC GTTGCAGCCCATCTTGTCCGTAATGCACTGGGAGGCGCGAACCAAGCCTTCACTGAAGGAGTTTTAAGGCTGCCA TACCCTTTGTCTGCAAATAGTCGTGGTGAATTGGCGGTGATGGTCCTTCAATTCGAATGA |
| Gene | >Agabi119p4|064780 ATGGCTTGGGTGACTGGGCGACGTTCTCTCCTTTTCTTGACAGGTGTTGCTTCATTTGGTGGATCCCTATACTAT CGAGAAACCAATAATCGCGCCGACAACCATCAGGATGATGCATGTAACATTCCATCCAAGAGAAGTGAGTTAGCA TTGACCGTAAGCATGCAGTGACGCGCAACTGATGGTAAGCTCATAGCGTTCGACTCATTTGCGAATCATATATGG TCCGGCAGTCCGGTTGATGAACGGAACGATAAAATTGTTACCAGGTACAGCTCTGCCTATCTGGCCAAGTGCGTC CTTCACCTTATCCCCCCACCAGCTGCACATCTAACCTTTCTTAGTAAAGGGATTGGGTTTTGCAGTTTAGGTTTT CATCGTATCGAGTTGGCGCCTCAACAAAACTGGACGTTTGGTCTTCTGAGCGAAGGTTTCAGAGGCTGGGAAACT AGCGCCTTCATATTCAGAGCCCTTATACCCACAATATGTGCAGTGCTCAGTTTAGCGCTGGGTAAAAATGCCTCT CGCCCTGGTAAGGAGGATCTCTCCACAGAGCCCGAACCTCCAATCACCTCTGAAAAAATCGATATGTCGATCAGA AAGGCTTTTCTAGATGTTGACCATGGAGTGGTGGACCAGGCGCCAGACATGATCATATCATCTCCTTCTCAAGCT CTTAATATGGTCCAACTGTCTGCTGCTGTCTCAGGAAGCACCGGAATGTTGGCGGTATATGATGAGTCGAGGCGT ATCCTCAAAGTTGCAAACGTTGGAGATGCACGCGCCGTCTTAGGCCGTAAAGCACTGCATGAAAACGGTATGCCA TGCTTCGAGGTTCACGTCCTCAGTTCCGAACACACGTCTTCCAACCCTTCTGAACTGGCGCGCCTTCAGGAATCT CACTCCGACACTGACATAAAAGTTCTTCAGGAATACGTTGAGCGGGACATCACTCGTGCATTCGGCTTAGCTATG TGTAAATGGAGCCAAAGCTTGCAGGACCGAATTTATCGAGATTATCTTGGCGAATCTCCATTAGTCAATCTTCTC CCTCGATCGACCTCTGATCCAGAGAATCAGCAGCAACCGTACCTCAATGCTGAACCCGATATAAGGACGATTCAT GTCCGGCCTGGTGATTTTCTTGTCATGGCCAGCAAGGGTGTTTGGGATTCTCTTGCGAATGAGGAAGTCATTGGC CTCGTCGGCGTATGGTTGGCGCGACAGAACTGTAATCCCCGAACTCCGATTTCACACCCATCCTTGGAGAAAATT TATGATCAGAATATGTTACCTGTCAAGTTCCCTGAAAAATGGGAAGACACAACAACCTGGTACCAGAAGATGAAG ATTCAGAAGAAATATATCTGCGTTGACACCAACGTTGCAGCCCATCTTGTCCGTAATGCACTGGGAGGCGCGAAC CAAGCCTTCACTGAAGGAGTTTTAAGGCTGCCATACCCTTTGTCTGCAAATAGTCGGTACGTAGTTATTTCTGTG GCTGCCGAGATCAGCGATAACACAACGCTACAGTGGTGAATTGGCGGTGATGGTCCTTCAATTCGAATGA |