Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|063730
Gene name
Locationscaffold_03b:774146..776371
Strand+
Gene length (bp)2225
Transcript length (bp)1917
Coding sequence length (bp)1917
Protein length (aa) 639

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10198 Ada3 Histone acetyltransferases subunit 3 4.8E-26 375 501

Swissprot hits

[Show all]
Swissprot ID Swissprot Description Start End E-value
sp|Q9USU8|NGG1_SCHPO Chromatin-remodeling complexes subunit ngg1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ngg1 PE=1 SV=1 217 487 4.0E-16
sp|Q7SY21|TADA3_DANRE Transcriptional adapter 3 OS=Danio rerio GN=tada3 PE=2 SV=1 234 479 5.0E-10
sp|P32494|NGG1_YEAST Chromatin-remodeling complexes subunit NGG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NGG1 PE=1 SV=1 394 568 4.0E-09
sp|O75528|TADA3_HUMAN Transcriptional adapter 3 OS=Homo sapiens GN=TADA3 PE=1 SV=1 234 479 4.0E-09
sp|Q5EAE2|TADA3_BOVIN Transcriptional adapter 3 OS=Bos taurus GN=TADA3 PE=2 SV=1 234 479 4.0E-09
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9USU8|NGG1_SCHPO Chromatin-remodeling complexes subunit ngg1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=ngg1 PE=1 SV=1 217 487 4.0E-16
sp|Q7SY21|TADA3_DANRE Transcriptional adapter 3 OS=Danio rerio GN=tada3 PE=2 SV=1 234 479 5.0E-10
sp|P32494|NGG1_YEAST Chromatin-remodeling complexes subunit NGG1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=NGG1 PE=1 SV=1 394 568 4.0E-09
sp|O75528|TADA3_HUMAN Transcriptional adapter 3 OS=Homo sapiens GN=TADA3 PE=1 SV=1 234 479 4.0E-09
sp|Q5EAE2|TADA3_BOVIN Transcriptional adapter 3 OS=Bos taurus GN=TADA3 PE=2 SV=1 234 479 4.0E-09
sp|Q8R0L9|TADA3_MOUSE Transcriptional adapter 3 OS=Mus musculus GN=Tada3 PE=1 SV=1 234 479 5.0E-09
sp|Q4V8F5|TADA3_RAT Transcriptional adapter 3 OS=Rattus norvegicus GN=Tada3 PE=2 SV=1 234 479 5.0E-09
sp|Q5R5V0|TADA3_PONAB Transcriptional adapter 3 OS=Pongo abelii GN=TADA3 PE=2 SV=1 234 479 7.0E-09
sp|Q66JG5|TADA3_XENTR Transcriptional adapter 3 OS=Xenopus tropicalis GN=tada3 PE=2 SV=1 234 479 8.0E-09
sp|Q66IZ5|TAD3B_XENLA Transcriptional adapter 3-B OS=Xenopus laevis GN=tada3-b PE=2 SV=1 234 479 1.0E-08
sp|Q6PGT0|TAD3A_XENLA Transcriptional adapter 3-A OS=Xenopus laevis GN=tada3-a PE=2 SV=1 234 479 1.0E-07
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 51 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|063730
MPESYPAVLLKNTPEALPSVDDLEHIRKELRSLKQRAMDRAKKAGDDLRTIEESMRRLKEKEKGKLKAVDKIKRE
RDFTPLPDGDEPRLSGPHSSKSRNSSLPSAANTPGARSSFDPRNRSLLDDAKKKKKKRKREDDSDLEHDARPRKS
TPPTNHTPTFIPPPPKVPKPSAQTPQPHSKSLTVPDFTVPSPQPLLSPRPPIIPPPIPGPSKPSEVTEDFSKAKQ
PSQVSVQTFYNSIEHWTRAIREEDVGYLEITGDEVEPYVMPKLGRHYTEVWEDQDAGILPLLPPHVILSNQEAPS
SYFTPPEPKWDPSTLGDTDLLGEEKGHGPLTERVISALLPLQDPAGWKGVKAAEDAMEGRPGGSGAAAARKERLN
VTDLEARIRDNLRSHGLLDAPPDFTEKVDDPIATALRHAQTELRRVVASNKARKARLIAIAKDRLGYEEYLECRK
SIDRNINALFTKLQKKDMPKYSKKKKKVDGNGESGGAVNGTTGTGTGGGANLLSNLAPSPAALGFIQDDDQRIHL
NDQLKHLMETRRDWVDNIGSIFEQKESEQPGRIYGLPKESIYKGIEEEVQRLLVDPGPVVVVKDEDILREGRGGS
GGIGGGSGGVVPGKAKVKGKERAGTHSIGGDEVMMDLT*
Coding >Agabi119p4|063730
ATGCCCGAATCATATCCTGCAGTGCTGCTCAAAAACACCCCGGAGGCTTTGCCATCCGTAGACGACCTCGAGCAC
ATCCGTAAAGAACTCAGGTCCCTCAAGCAACGCGCCATGGACCGGGCCAAGAAGGCTGGCGATGACCTCAGAACT
ATCGAAGAATCTATGCGGCGCCTGAAGGAGAAAGAAAAGGGGAAGCTCAAGGCGGTCGATAAGATCAAGCGCGAA
CGAGACTTCACACCCTTACCCGATGGCGACGAACCTAGGCTCTCTGGGCCTCATTCTTCCAAGTCAAGAAATAGC
TCTCTTCCTTCTGCTGCAAACACACCAGGTGCACGGTCTTCGTTCGACCCTCGCAACCGCAGTCTGCTCGATGAT
GCCAAGAAGAAGAAGAAGAAACGGAAACGAGAAGATGACAGTGACCTAGAACACGACGCTCGTCCTCGAAAATCC
ACGCCACCCACCAATCACACTCCCACTTTTATCCCTCCGCCACCCAAGGTTCCAAAACCCTCTGCCCAAACTCCT
CAACCTCATTCCAAATCTCTTACCGTACCCGATTTCACTGTACCGTCCCCTCAACCCCTACTCTCACCCCGACCT
CCCATCATACCACCTCCAATACCTGGGCCTAGTAAGCCCTCTGAAGTAACGGAAGACTTCAGCAAAGCAAAACAG
CCTTCCCAGGTGTCCGTTCAGACATTTTATAACAGTATCGAACATTGGACACGAGCCATCCGCGAAGAAGACGTC
GGTTACCTAGAAATTACCGGGGACGAAGTCGAACCTTATGTCATGCCCAAACTTGGTCGACATTATACAGAAGTT
TGGGAAGATCAAGATGCGGGGATATTACCACTATTACCACCACATGTCATTCTCTCTAACCAAGAAGCGCCATCA
TCATATTTTACACCTCCAGAACCGAAATGGGATCCATCGACGCTTGGAGATACGGATTTACTAGGGGAAGAAAAA
GGTCACGGCCCGTTAACGGAAAGAGTGATCAGTGCATTATTACCGTTGCAGGATCCAGCAGGTTGGAAAGGCGTT
AAGGCGGCGGAAGATGCTATGGAGGGTAGACCTGGTGGAAGTGGAGCTGCGGCGGCACGAAAAGAAAGGTTGAAT
GTTACGGATTTGGAGGCTAGGATAAGGGATAATCTGAGGTCTCATGGATTACTCGACGCACCTCCAGACTTCACA
GAAAAAGTGGATGACCCTATTGCGACAGCACTACGTCATGCACAAACGGAACTGCGGCGTGTTGTAGCTTCGAAT
AAAGCAAGAAAAGCTAGATTGATTGCAATAGCTAAAGATCGACTAGGTTATGAAGAATATCTTGAATGTCGGAAG
TCGATCGACAGGAATATCAATGCGCTTTTCACGAAACTTCAGAAAAAGGATATGCCGAAGTATTCTAAAAAGAAG
AAGAAAGTGGATGGAAATGGAGAGTCTGGTGGTGCCGTCAACGGAACGACAGGGACCGGTACAGGTGGAGGAGCA
AATCTACTCAGCAATCTCGCCCCAAGCCCAGCGGCACTAGGATTCATCCAAGACGATGACCAACGGATTCACCTA
AATGACCAACTCAAACATTTAATGGAAACAAGGAGAGATTGGGTGGACAATATCGGTTCTATATTCGAGCAAAAG
GAAAGTGAACAACCTGGAAGGATATATGGATTACCGAAGGAGAGTATTTATAAAGGGATAGAAGAGGAGGTTCAG
AGGTTATTGGTTGATCCTGGACCGGTTGTTGTTGTTAAGGATGAAGATATTCTGAGAGAGGGGAGGGGAGGGAGT
GGCGGTATTGGTGGAGGGAGTGGTGGAGTTGTTCCTGGAAAGGCGAAGGTGAAGGGGAAGGAGAGAGCTGGCACG
CATAGTATTGGCGGAGATGAGGTGATGATGGACTTGACATGA
Transcript >Agabi119p4|063730
ATGCCCGAATCATATCCTGCAGTGCTGCTCAAAAACACCCCGGAGGCTTTGCCATCCGTAGACGACCTCGAGCAC
ATCCGTAAAGAACTCAGGTCCCTCAAGCAACGCGCCATGGACCGGGCCAAGAAGGCTGGCGATGACCTCAGAACT
ATCGAAGAATCTATGCGGCGCCTGAAGGAGAAAGAAAAGGGGAAGCTCAAGGCGGTCGATAAGATCAAGCGCGAA
CGAGACTTCACACCCTTACCCGATGGCGACGAACCTAGGCTCTCTGGGCCTCATTCTTCCAAGTCAAGAAATAGC
TCTCTTCCTTCTGCTGCAAACACACCAGGTGCACGGTCTTCGTTCGACCCTCGCAACCGCAGTCTGCTCGATGAT
GCCAAGAAGAAGAAGAAGAAACGGAAACGAGAAGATGACAGTGACCTAGAACACGACGCTCGTCCTCGAAAATCC
ACGCCACCCACCAATCACACTCCCACTTTTATCCCTCCGCCACCCAAGGTTCCAAAACCCTCTGCCCAAACTCCT
CAACCTCATTCCAAATCTCTTACCGTACCCGATTTCACTGTACCGTCCCCTCAACCCCTACTCTCACCCCGACCT
CCCATCATACCACCTCCAATACCTGGGCCTAGTAAGCCCTCTGAAGTAACGGAAGACTTCAGCAAAGCAAAACAG
CCTTCCCAGGTGTCCGTTCAGACATTTTATAACAGTATCGAACATTGGACACGAGCCATCCGCGAAGAAGACGTC
GGTTACCTAGAAATTACCGGGGACGAAGTCGAACCTTATGTCATGCCCAAACTTGGTCGACATTATACAGAAGTT
TGGGAAGATCAAGATGCGGGGATATTACCACTATTACCACCACATGTCATTCTCTCTAACCAAGAAGCGCCATCA
TCATATTTTACACCTCCAGAACCGAAATGGGATCCATCGACGCTTGGAGATACGGATTTACTAGGGGAAGAAAAA
GGTCACGGCCCGTTAACGGAAAGAGTGATCAGTGCATTATTACCGTTGCAGGATCCAGCAGGTTGGAAAGGCGTT
AAGGCGGCGGAAGATGCTATGGAGGGTAGACCTGGTGGAAGTGGAGCTGCGGCGGCACGAAAAGAAAGGTTGAAT
GTTACGGATTTGGAGGCTAGGATAAGGGATAATCTGAGGTCTCATGGATTACTCGACGCACCTCCAGACTTCACA
GAAAAAGTGGATGACCCTATTGCGACAGCACTACGTCATGCACAAACGGAACTGCGGCGTGTTGTAGCTTCGAAT
AAAGCAAGAAAAGCTAGATTGATTGCAATAGCTAAAGATCGACTAGGTTATGAAGAATATCTTGAATGTCGGAAG
TCGATCGACAGGAATATCAATGCGCTTTTCACGAAACTTCAGAAAAAGGATATGCCGAAGTATTCTAAAAAGAAG
AAGAAAGTGGATGGAAATGGAGAGTCTGGTGGTGCCGTCAACGGAACGACAGGGACCGGTACAGGTGGAGGAGCA
AATCTACTCAGCAATCTCGCCCCAAGCCCAGCGGCACTAGGATTCATCCAAGACGATGACCAACGGATTCACCTA
AATGACCAACTCAAACATTTAATGGAAACAAGGAGAGATTGGGTGGACAATATCGGTTCTATATTCGAGCAAAAG
GAAAGTGAACAACCTGGAAGGATATATGGATTACCGAAGGAGAGTATTTATAAAGGGATAGAAGAGGAGGTTCAG
AGGTTATTGGTTGATCCTGGACCGGTTGTTGTTGTTAAGGATGAAGATATTCTGAGAGAGGGGAGGGGAGGGAGT
GGCGGTATTGGTGGAGGGAGTGGTGGAGTTGTTCCTGGAAAGGCGAAGGTGAAGGGGAAGGAGAGAGCTGGCACG
CATAGTATTGGCGGAGATGAGGTGATGATGGACTTGACATGA
Gene >Agabi119p4|063730
ATGCCCGAATCATATCCTGCAGTGCTGCTCAAAAACACCCCGGAGGCTTTGCCATCCGTAGACGACCTCGAGCAC
ATCCGTAAAGAACTCAGGTCCCTCAAGCAACGCGCCATGGACCGGGCCAAGAAGGCTGGCGATGACCTCAGAACT
ATCGAAGAATCTATGCGGCGCCTGAAGGAGAAAGAAAAGGGGAAGCTCAAGGCGGTCGATAAGATCAAGCGCGAA
CGAGACTGTACGTCAGTTCGCTTCCCTAAATCTAATTATTTCTAACGCGTTTCGTTTCCTGCATCTACATGTTGC
TTTCTACCGTCGCGTTTAATTGATTGCGACCAGTCACACCCTTACCCGATGGCGACGAACCTAGGCTCTCTGGGC
CTCATTCTTCCAAGTCAAGAAATAGCTCTCTTCCTTCTGCTGCAAACACACCAGGTGCACGGTCTTCGTTCGACC
CTCGCAACCGCAGGTTAGTCCTCTGACTTGCGCCACAAAACACGGCTTACTATTTTGACAGTCTGCTCGATGATG
CCAAGAAGAAGAAGAAGAAACGGAAACGAGAAGATGACAGTGACCTAGAACACGGTATGTGCATGCAGGCTCAAG
TATTCCTCTGGCCTCAACCACAGCAGACGCTCGTCCTCGAAAATCCACGCCACCCACCAATCACACTCCCACTTT
TATCCCTCCGCCACCCAAGGTTCCAAAACCCTCTGCCCAAACTCCTCAACCTCATTCCAAAGTAAGCCAGGCAAG
CCCATTCTCGTTGATTGTGACAGTACTTATCACCTACGTAGTCTCTTACCGTACCCGATTTCACTGTACCGTCCC
CTCAACCCCTACTCTCACCCCGACCTCCCATCATACCACCTCCAATACCTGGGCCTAGTAAGCCCTCTGAAGTAA
CGGAAGACTTCAGCAAAGCAAAACAGCCTTCCCAGGTGTCCGTTCAGACATTTTATAACAGTATCGAACATTGGA
CACGAGCCATCCGCGAAGAAGACGTCGGTTACCTAGAAATTACCGGGGACGAAGTCGAACCTTATGTCATGCCCA
AACTTGGTCGACATTATACAGAAGTTTGGGAAGATCAAGATGCGGGGATATTACCACTATTACCACCACATGTCA
TTCTCTCTAACCAAGAAGCGCCATCATCATATTTTACACCTCCAGAACCGAAATGGGATCCATCGACGCTTGGAG
ATACGGATTTACTAGGGGAAGAAAAAGGTCACGGCCCGTTAACGGAAAGAGTGATCAGTGCATTATTACCGTTGC
AGGATCCAGCAGGTTGGAAAGGCGTTAAGGCGGCGGAAGATGCTATGGAGGGTAGACCTGGTGGAAGTGGAGCTG
CGGCGGCACGAAAAGAAAGGTTGAATGTTACGGATTTGGAGGCTAGGATAAGGGATAATCTGAGGTCTCATGGAT
TACTCGACGCACCTGTGAGTTTCATAAAGAAACTCGACCCTTCTGTGTAACTAATCTTTCACGCGCTATAGCCAG
ACTTCACAGAAAAAGTGGATGACCCTATTGCGACAGCACTACGTCATGCACAAACGGAACTGCGGCGTGTTGTAG
CTTCGAATAAAGCAAGAAAAGCTAGATTGATTGCAATAGCTAAAGATCGACTAGGTTATGAAGAATATCTTGAAT
GTCGGAAGTCGATCGACAGGAATATCAATGCGCTTTTCACGAAACTTCAGAAAAAGGATATGCCGAAGTATTCTA
AAAAGAAGAAGAAAGTGGATGGAAATGGAGAGTCTGGTGGTGCCGTCAACGGAACGACAGGGACCGGTACAGGTG
GAGGAGCAAATCTACTCAGCAATCTCGCCCCAAGCCCAGCGGCACTAGGATTCATCCAAGACGATGACCAACGGA
TTCACCTAAATGACCAACTCAAACATTTAATGGAAACAAGGAGAGATTGGGTGGACAATATCGGTTCTATATTCG
AGCAAAAGGAAAGTGAACAACCTGGAAGGATATATGGATTACCGAAGGAGAGTATTTATAAAGGGATAGAAGAGG
AGGTTCAGAGGTTATTGGTTGATCCTGGACCGGTTGTTGTTGTTAAGGATGAAGATATTCTGAGAGAGGGGAGGG
GAGGGAGTGGCGGTATTGGTGGAGGGAGTGGTGGAGTTGTTCCTGGAAAGGCGAAGGTGAAGGGGAAGGAGAGAG
CTGGCACGCATAGTATTGGCGGAGATGAGGTGATGATGGACTTGACATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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