Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|063560
Gene name
Locationscaffold_03b:730637..731589
Strand+
Gene length (bp)952
Transcript length (bp)855
Coding sequence length (bp)855
Protein length (aa) 285

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF02585 PIG-L GlcNAc-PI de-N-acetylase 7.7E-21 36 158

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9HDW9|GPI12_SCHPO Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi12 PE=3 SV=1 35 273 3.0E-34
sp|Q5SX19|PIGL_MOUSE N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Mus musculus GN=Pigl PE=2 SV=1 34 276 7.0E-34
sp|Q54C64|PIGL_DICDI Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Dictyostelium discoideum GN=pigl PE=3 SV=1 33 282 2.0E-33
sp|O35790|PIGL_RAT N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Rattus norvegicus GN=Pigl PE=2 SV=1 34 279 2.0E-33
sp|A6QQ24|PIGL_BOVIN N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Bos taurus GN=PIGL PE=2 SV=1 31 276 8.0E-33
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[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9HDW9|GPI12_SCHPO Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=gpi12 PE=3 SV=1 35 273 3.0E-34
sp|Q5SX19|PIGL_MOUSE N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Mus musculus GN=Pigl PE=2 SV=1 34 276 7.0E-34
sp|Q54C64|PIGL_DICDI Probable N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Dictyostelium discoideum GN=pigl PE=3 SV=1 33 282 2.0E-33
sp|O35790|PIGL_RAT N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Rattus norvegicus GN=Pigl PE=2 SV=1 34 279 2.0E-33
sp|A6QQ24|PIGL_BOVIN N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Bos taurus GN=PIGL PE=2 SV=1 31 276 8.0E-33
sp|Q9Y2B2|PIGL_HUMAN N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Homo sapiens GN=PIGL PE=1 SV=1 24 276 5.0E-32
sp|D4B4K9|GPI12_ARTBC N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_03399 PE=3 SV=1 24 280 4.0E-30
sp|P23797|GPI12_YEAST N-acetylglucosaminyl-phosphatidylinositol de-N-acetylase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=GPI12 PE=1 SV=2 4 278 4.0E-18
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 25 0.45

Transmembrane Domains

Domain # Start End Length
1 5 24 19

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|063560
MGSTFIVIVFSILILLLTLPYDTGRFTASDGHRRILFLTAHPDDECLFFAPTILGINRTETNLYALSLSIGNADG
LGAVRREEYHRSYDVLGIPHEQRWIVDHPKLQDNFTSSWDPKVISKEINHYILSNEIDTILTFDSAGISSHPNHI
SLPYGVAHLIQHLDSLDRPTPRLYTLTTVPLFAKYTSILAPLLAKFDVVLARVVDRLINLTGNKSALSSILPVRI
SDPPSKARAVPMFVSGIPEYVRALKAMRMHESQLVWFRWLYVSFSRYMWVNDWQEVKVQ*
Coding >Agabi119p4|063560
ATGGGATCGACGTTCATCGTCATTGTGTTTTCCATCCTCATTCTCCTCCTGACCTTGCCGTATGACACCGGAAGA
TTTACTGCTAGCGATGGCCACAGGCGTATCTTATTCTTGACCGCACATCCAGACGACGAATGTCTTTTTTTTGCC
CCTACGATACTTGGAATCAACCGTACAGAAACCAACCTTTATGCGCTCAGTCTTTCAATAGGCAATGCAGATGGT
CTTGGGGCAGTGAGAAGAGAAGAGTATCACAGAAGCTATGATGTCCTCGGTATTCCCCATGAGCAGCGCTGGATA
GTTGATCATCCGAAGCTACAAGATAACTTCACTTCGAGTTGGGATCCCAAGGTCATAAGCAAAGAGATCAATCAT
TACATTCTCAGCAATGAGATTGATACGATCTTAACATTCGATTCGGCTGGCATATCCTCTCACCCCAACCACATC
TCACTTCCTTATGGCGTCGCGCATCTTATCCAACATCTCGACTCACTTGACCGTCCAACGCCGCGTCTTTATACT
CTCACAACGGTCCCGTTGTTTGCCAAGTACACGTCCATCCTAGCACCACTCCTCGCCAAATTTGATGTTGTGCTG
GCGCGAGTCGTCGACCGCTTGATCAACCTTACGGGAAATAAATCTGCCCTGTCCAGCATTTTACCAGTGAGGATC
AGCGATCCGCCTTCCAAAGCTAGGGCTGTGCCGATGTTCGTTTCTGGAATTCCTGAATATGTGCGCGCGTTGAAG
GCGATGCGGATGCATGAAAGCCAACTCGTATGGTTCCGATGGCTTTATGTGTCGTTTTCGCGGTACATGTGGGTA
AATGATTGGCAGGAGGTCAAAGTACAGTGA
Transcript >Agabi119p4|063560
ATGGGATCGACGTTCATCGTCATTGTGTTTTCCATCCTCATTCTCCTCCTGACCTTGCCGTATGACACCGGAAGA
TTTACTGCTAGCGATGGCCACAGGCGTATCTTATTCTTGACCGCACATCCAGACGACGAATGTCTTTTTTTTGCC
CCTACGATACTTGGAATCAACCGTACAGAAACCAACCTTTATGCGCTCAGTCTTTCAATAGGCAATGCAGATGGT
CTTGGGGCAGTGAGAAGAGAAGAGTATCACAGAAGCTATGATGTCCTCGGTATTCCCCATGAGCAGCGCTGGATA
GTTGATCATCCGAAGCTACAAGATAACTTCACTTCGAGTTGGGATCCCAAGGTCATAAGCAAAGAGATCAATCAT
TACATTCTCAGCAATGAGATTGATACGATCTTAACATTCGATTCGGCTGGCATATCCTCTCACCCCAACCACATC
TCACTTCCTTATGGCGTCGCGCATCTTATCCAACATCTCGACTCACTTGACCGTCCAACGCCGCGTCTTTATACT
CTCACAACGGTCCCGTTGTTTGCCAAGTACACGTCCATCCTAGCACCACTCCTCGCCAAATTTGATGTTGTGCTG
GCGCGAGTCGTCGACCGCTTGATCAACCTTACGGGAAATAAATCTGCCCTGTCCAGCATTTTACCAGTGAGGATC
AGCGATCCGCCTTCCAAAGCTAGGGCTGTGCCGATGTTCGTTTCTGGAATTCCTGAATATGTGCGCGCGTTGAAG
GCGATGCGGATGCATGAAAGCCAACTCGTATGGTTCCGATGGCTTTATGTGTCGTTTTCGCGGTACATGTGGGTA
AATGATTGGCAGGAGGTCAAAGTACAGTGA
Gene >Agabi119p4|063560
ATGGGATCGACGTTCATCGTCATTGTGTTTTCCATCCTCATTCTCCTCCTGACCTTGCCGTATGACACCGGAAGA
TTTACTGCTAGCGATGGCCACAGGCGTATCTTATTCTTGACCGCACATCCAGACGACGAATGTCTTTTTTTTGCC
CCTACGATACTTGGAATCAACCGTACAGAAACCAACCTTTATGCGCTCAGTCTTTCAATAGGCAATGCAGATGGT
CTTGGGGCAGTGAGAAGAGAAGAGTATCACAGAAGCTATGATGTCCTCGGTATTCCCCATGAGCAGCGCTGGATA
GTTGATCATCCGTGGGTAGTCTTCTTTGAGCTCCGGCTCCAATTTGATGGAACGTTATAGGAAGCTACAAGATAA
CTTCACTTCGAGTTGGGATCCCAAGGTCATAAGCAAAGAGATCAATCATTACATTCTCAGCAATGAGATTGATAC
GGTATCTCTTCCTCCCCGCTTGTCTTGCACGATCTAAGCCATTTGCCAGATCTTAACATTCGATTCGGCTGGCAT
ATCCTCTCACCCCAACCACATCTCACTTCCTTATGGCGTCGCGCATCTTATCCAACATCTCGACTCACTTGACCG
TCCAACGCCGCGTCTTTATACTCTCACAACGGTCCCGTTGTTTGCCAAGTACACGTCCATCCTAGCACCACTCCT
CGCCAAATTTGATGTTGTGCTGGCGCGAGTCGTCGACCGCTTGATCAACCTTACGGGAAATAAATCTGCCCTGTC
CAGCATTTTACCAGTGAGGATCAGCGATCCGCCTTCCAAAGCTAGGGCTGTGCCGATGTTCGTTTCTGGAATTCC
TGAATATGTGCGCGCGTTGAAGGCGATGCGGATGCATGAAAGCCAACTCGTATGGTTCCGATGGCTTTATGTGTC
GTTTTCGCGGTACATGTGGGTAAATGATTGGCAGGAGGTCAAAGTACAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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