© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|063230 |
| Gene name | |
| Location | scaffold_03b:656240..657096 |
| Strand | + |
| Gene length (bp) | 856 |
| Transcript length (bp) | 696 |
| Coding sequence length (bp) | 696 |
| Protein length (aa) | 232 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 3.0E-14 | 47 | 204 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 4.0E-13 | 69 | 163 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 1.5E-12 | 68 | 159 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 2.3E-10 | 63 | 167 |
| PF08242 | Methyltransf_12 | Methyltransferase domain | 1.8E-08 | 68 | 161 |
| PF01209 | Ubie_methyltran | ubiE/COQ5 methyltransferase family | 7.5E-05 | 61 | 170 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94628|YGE9_SCHPO | Uncharacterized methyltransferase C1347.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1347.09 PE=3 SV=1 | 68 | 204 | 5.0E-19 |
| sp|Q9TYP1|STRM1_CAEEL | Sterol 4-C-methyltransferase strm-1 OS=Caenorhabditis elegans GN=strm-1 PE=3 SV=2 | 58 | 171 | 1.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|063230 MSSHSHSHQHQHQHHHHRGYDIAAQKEHFDNPEHAQENFPHIRDVAARVAKGIIKTYDKLEKEKTVAMDFACGNG FVSKGLMPFVKSILGIDISPVVVEKYNASLKGEGASAVCMELKGEKGELEDAQFDLIFCTAGYHHLESYEEMTRI LTSFLKPGGDLIVADLLRKEDRSLFPATFEHVAPHAHGLSKDDIQRAFDGASLTMRSFNMLPPADYEFPDIFIAI GEKPSV* |
| Coding | >Agabi119p4|063230 ATGTCCTCACACTCTCATTCTCACCAGCACCAGCACCAGCATCACCATCACCGCGGTTATGATATTGCTGCCCAG AAAGAACATTTCGATAACCCTGAGCATGCACAGGAGAACTTCCCTCATATCCGGGATGTTGCGGCAAGGGTCGCC AAAGGTATCATCAAGACCTATGACAAGCTTGAAAAGGAGAAAACAGTTGCAATGGATTTTGCTTGTGGCAACGGA TTTGTTTCCAAAGGATTGATGCCATTTGTGAAGTCAATCTTGGGTATCGACATCAGCCCAGTCGTTGTGGAGAAA TACAATGCTAGTCTAAAAGGCGAGGGCGCCTCTGCTGTCTGTATGGAACTCAAGGGTGAGAAAGGCGAACTCGAG GATGCTCAATTTGACCTCATTTTTTGTACTGCTGGATATCACCATCTGGAGTCCTATGAAGAAATGACTCGCATT CTGACATCCTTCCTTAAACCCGGAGGCGATCTCATTGTGGCAGATCTGTTACGCAAGGAAGACCGCTCGCTCTTC CCGGCTACGTTTGAACACGTAGCTCCCCATGCACACGGATTGTCAAAAGACGACATACAAAGAGCGTTCGATGGA GCAAGCTTGACAATGAGATCCTTTAACATGTTACCTCCTGCTGATTATGAGTTCCCTGATATCTTCATCGCCATC GGAGAGAAACCCTCTGTGTAA |
| Transcript | >Agabi119p4|063230 ATGTCCTCACACTCTCATTCTCACCAGCACCAGCACCAGCATCACCATCACCGCGGTTATGATATTGCTGCCCAG AAAGAACATTTCGATAACCCTGAGCATGCACAGGAGAACTTCCCTCATATCCGGGATGTTGCGGCAAGGGTCGCC AAAGGTATCATCAAGACCTATGACAAGCTTGAAAAGGAGAAAACAGTTGCAATGGATTTTGCTTGTGGCAACGGA TTTGTTTCCAAAGGATTGATGCCATTTGTGAAGTCAATCTTGGGTATCGACATCAGCCCAGTCGTTGTGGAGAAA TACAATGCTAGTCTAAAAGGCGAGGGCGCCTCTGCTGTCTGTATGGAACTCAAGGGTGAGAAAGGCGAACTCGAG GATGCTCAATTTGACCTCATTTTTTGTACTGCTGGATATCACCATCTGGAGTCCTATGAAGAAATGACTCGCATT CTGACATCCTTCCTTAAACCCGGAGGCGATCTCATTGTGGCAGATCTGTTACGCAAGGAAGACCGCTCGCTCTTC CCGGCTACGTTTGAACACGTAGCTCCCCATGCACACGGATTGTCAAAAGACGACATACAAAGAGCGTTCGATGGA GCAAGCTTGACAATGAGATCCTTTAACATGTTACCTCCTGCTGATTATGAGTTCCCTGATATCTTCATCGCCATC GGAGAGAAACCCTCTGTGTAA |
| Gene | >Agabi119p4|063230 ATGTCCTCACACTCTCATTCTCACCAGCACCAGCACCAGCATCACCATCACCGCGGTTATGATATTGCTGCCCAG AAAGAACATTTCGATAACCCTGAGCATGCACAGGAGAACTTCCCTCATATCCGGGATGTTGCGGCAAGGTATGCC TATAGTCCTCTCAGAATACAACTAAAGAGCCAATCGTCATGTTAGGGTCGCCAAAGGTATCATCAAGACCTATGA CAAGCTTGAAAAGGAGAAAACAGTTGCAATGGATTTTGCTTGTGGCAACGGTATGAATGCTTACTCTTCTCGGGA TCAAGGATTTGATCACTCATGGCGCAATAGGATTTGTTTCCAAAGGATTGATGCCATTTGTGAAGTCAATCTTGG GTATCGACATCAGCCCAGTCGTTGTGGAGAAATACAATGCTAGTCTAAAAGGCGAGGGCGCCTCTGCTGTCTGTA TGGAACTCAAGGGTGAGAAAGGCGAACTCGAGGATGCTCAATTTGACCTCATTTTTGTAAGTCATTCGTTGTCAA ACTGCGTAAGACAGCTAATGTGAACATGGTGCAGTGTACTGCTGGATATCACCATCTGGAGTCCTATGAAGAAAT GACTCGCATTCTGACATCCTTCCTTAAACCCGGAGGCGATCTCATTGTGGCAGATCTGTTACGCAAGGAAGACCG CTCGCTCTTCCCGGCTACGTTTGAACACGTAGCTCCCCATGCACACGGATTGTCAAAAGACGACATACAAAGAGC GTTCGATGGAGCAAGCTTGACAATGAGATCCTTTAACATGTTACCTCCTGCTGATTATGAGTTCCCTGATATCTT CATCGCCATCGGAGAGAAACCCTCTGTGTAA |