© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Agabi119p4|063200 |
| Gene name | |
| Location | scaffold_03b:648407..649395 |
| Strand | + |
| Gene length (bp) | 988 |
| Transcript length (bp) | 711 |
| Coding sequence length (bp) | 711 |
| Protein length (aa) | 237 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13489 | Methyltransf_23 | Methyltransferase domain | 2.5E-17 | 39 | 161 |
| PF13649 | Methyltransf_25 | Methyltransferase domain | 4.4E-16 | 49 | 150 |
| PF08242 | Methyltransf_12 | Methyltransferase domain | 1.5E-14 | 50 | 152 |
| PF13847 | Methyltransf_31 | Methyltransferase domain | 8.3E-14 | 45 | 158 |
| PF08241 | Methyltransf_11 | Methyltransferase domain | 1.9E-13 | 50 | 154 |
| PF01209 | Ubie_methyltran | ubiE/COQ5 methyltransferase family | 2.7E-10 | 46 | 169 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94628|YGE9_SCHPO | Uncharacterized methyltransferase C1347.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1347.09 PE=3 SV=1 | 49 | 197 | 8.0E-24 |
| sp|O31474|YCGJ_BACSU | Uncharacterized methyltransferase YcgJ OS=Bacillus subtilis (strain 168) GN=ycgJ PE=1 SV=2 | 45 | 156 | 1.0E-10 |
| sp|Q8PK00|UBIG_XANAC | Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas axonopodis pv. citri (strain 306) GN=ubiG PE=3 SV=1 | 2 | 157 | 2.0E-10 |
| sp|Q3BSF8|UBIG_XANC5 | Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ubiG PE=3 SV=1 | 2 | 157 | 3.0E-10 |
| sp|Q5GZB5|UBIG_XANOR | Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) GN=ubiG PE=3 SV=1 | 3 | 157 | 1.0E-08 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O94628|YGE9_SCHPO | Uncharacterized methyltransferase C1347.09 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1347.09 PE=3 SV=1 | 49 | 197 | 8.0E-24 |
| sp|O31474|YCGJ_BACSU | Uncharacterized methyltransferase YcgJ OS=Bacillus subtilis (strain 168) GN=ycgJ PE=1 SV=2 | 45 | 156 | 1.0E-10 |
| sp|Q8PK00|UBIG_XANAC | Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas axonopodis pv. citri (strain 306) GN=ubiG PE=3 SV=1 | 2 | 157 | 2.0E-10 |
| sp|Q3BSF8|UBIG_XANC5 | Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas campestris pv. vesicatoria (strain 85-10) GN=ubiG PE=3 SV=1 | 2 | 157 | 3.0E-10 |
| sp|Q5GZB5|UBIG_XANOR | Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas oryzae pv. oryzae (strain KACC10331 / KXO85) GN=ubiG PE=3 SV=1 | 3 | 157 | 1.0E-08 |
| sp|B2SHS9|UBIG_XANOP | Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas oryzae pv. oryzae (strain PXO99A) GN=ubiG PE=3 SV=1 | 3 | 157 | 1.0E-08 |
| sp|Q2P2C4|UBIG_XANOM | Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas oryzae pv. oryzae (strain MAFF 311018) GN=ubiG PE=3 SV=1 | 3 | 157 | 1.0E-08 |
| sp|Q8P8H2|UBIG_XANCP | Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) GN=ubiG PE=3 SV=1 | 2 | 157 | 8.0E-08 |
| sp|B0RS27|UBIG_XANCB | Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas campestris pv. campestris (strain B100) GN=ubiG PE=3 SV=1 | 2 | 157 | 8.0E-08 |
| sp|Q4UVL4|UBIG_XANC8 | Ubiquinone biosynthesis O-methyltransferase OS=Xanthomonas campestris pv. campestris (strain 8004) GN=ubiG PE=3 SV=1 | 2 | 157 | 8.0E-08 |
| sp|B0U3W1|UBIG_XYLFM | Ubiquinone biosynthesis O-methyltransferase OS=Xylella fastidiosa (strain M12) GN=ubiG PE=3 SV=1 | 3 | 154 | 9.0E-08 |
| sp|Q2L2T5|UBIG_BORA1 | Ubiquinone biosynthesis O-methyltransferase OS=Bordetella avium (strain 197N) GN=ubiG PE=3 SV=1 | 48 | 160 | 1.0E-07 |
| sp|Q9PAM5|UBIG_XYLFA | Ubiquinone biosynthesis O-methyltransferase OS=Xylella fastidiosa (strain 9a5c) GN=ubiG PE=3 SV=1 | 3 | 154 | 2.0E-07 |
| sp|Q7VZG7|UBIG_BORPE | Ubiquinone biosynthesis O-methyltransferase OS=Bordetella pertussis (strain Tohama I / ATCC BAA-589 / NCTC 13251) GN=ubiG PE=3 SV=1 | 48 | 160 | 3.0E-07 |
| sp|Q87BG5|UBIG_XYLFT | Ubiquinone biosynthesis O-methyltransferase OS=Xylella fastidiosa (strain Temecula1 / ATCC 700964) GN=ubiG PE=3 SV=1 | 3 | 154 | 3.0E-07 |
| sp|B2I705|UBIG_XYLF2 | Ubiquinone biosynthesis O-methyltransferase OS=Xylella fastidiosa (strain M23) GN=ubiG PE=3 SV=1 | 3 | 154 | 3.0E-07 |
| sp|Q7WGT9|UBIG_BORBR | Ubiquinone biosynthesis O-methyltransferase OS=Bordetella bronchiseptica (strain ATCC BAA-588 / NCTC 13252 / RB50) GN=ubiG PE=3 SV=2 | 48 | 160 | 4.0E-07 |
| sp|Q7NZ91|UBIG_CHRVO | Ubiquinone biosynthesis O-methyltransferase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 / NCIMB 9131 / NCTC 9757) GN=ubiG PE=3 SV=1 | 1 | 153 | 9.0E-07 |
| sp|B3PP83|UBIG_RHIE6 | Ubiquinone biosynthesis O-methyltransferase OS=Rhizobium etli (strain CIAT 652) GN=ubiG PE=3 SV=1 | 48 | 154 | 2.0E-06 |
| sp|B7UFP4|UBIG_ECO27 | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli O127:H6 (strain E2348/69 / EPEC) GN=ubiG PE=3 SV=1 | 28 | 150 | 4.0E-06 |
| sp|A8A296|UBIG_ECOHS | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli O9:H4 (strain HS) GN=ubiG PE=3 SV=1 | 28 | 150 | 4.0E-06 |
| sp|B1LLI3|UBIG_ECOSM | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli (strain SMS-3-5 / SECEC) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|Q0TFL0|UBIG_ECOL5 | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|B7MXR3|UBIG_ECO81 | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli O81 (strain ED1a) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|Q8FFP0|UBIG_ECOL6 | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|Q8XE29|UBIG_ECO57 | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli O157:H7 GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|B5YX17|UBIG_ECO5E | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli O157:H7 (strain EC4115 / EHEC) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|A7ZP50|UBIG_ECO24 | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli O139:H28 (strain E24377A / ETEC) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|Q820C5|UBIG_SHIFL | Ubiquinone biosynthesis O-methyltransferase OS=Shigella flexneri GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|C4ZU73|UBIG_ECOBW | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli (strain K12 / MC4100 / BW2952) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|B1X8C6|UBIG_ECODH | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli (strain K12 / DH10B) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|P17993|UBIG_ECOLI | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli (strain K12) GN=ubiG PE=1 SV=1 | 28 | 150 | 5.0E-06 |
| sp|B7N5J4|UBIG_ECOLU | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli O17:K52:H18 (strain UMN026 / ExPEC) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|B1J5G4|UBIG_PSEPW | Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas putida (strain W619) GN=ubiG PE=3 SV=1 | 48 | 153 | 5.0E-06 |
| sp|Q31Z65|UBIG_SHIBS | Ubiquinone biosynthesis O-methyltransferase OS=Shigella boydii serotype 4 (strain Sb227) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|B2TW20|UBIG_SHIB3 | Ubiquinone biosynthesis O-methyltransferase OS=Shigella boydii serotype 18 (strain CDC 3083-94 / BS512) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|B6I7I7|UBIG_ECOSE | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli (strain SE11) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|B1IXV6|UBIG_ECOLC | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli (strain ATCC 8739 / DSM 1576 / Crooks) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|B7M5R7|UBIG_ECO8A | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli O8 (strain IAI1) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|Q3YZX6|UBIG_SHISS | Ubiquinone biosynthesis O-methyltransferase OS=Shigella sonnei (strain Ss046) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|Q0T2P9|UBIG_SHIF8 | Ubiquinone biosynthesis O-methyltransferase OS=Shigella flexneri serotype 5b (strain 8401) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|Q1R9I4|UBIG_ECOUT | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli (strain UTI89 / UPEC) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|B7MFZ8|UBIG_ECO45 | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli O45:K1 (strain S88 / ExPEC) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|Q32DV8|UBIG_SHIDS | Ubiquinone biosynthesis O-methyltransferase OS=Shigella dysenteriae serotype 1 (strain Sd197) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|B7LAP9|UBIG_ECO55 | Ubiquinone biosynthesis O-methyltransferase OS=Escherichia coli (strain 55989 / EAEC) GN=ubiG PE=3 SV=1 | 28 | 150 | 5.0E-06 |
| sp|Q9HZ63|UBIG_PSEAE | Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=ubiG PE=3 SV=1 | 48 | 154 | 6.0E-06 |
| sp|B7V9J5|UBIG_PSEA8 | Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas aeruginosa (strain LESB58) GN=ubiG PE=3 SV=1 | 48 | 154 | 6.0E-06 |
| sp|Q2K3S8|UBIG_RHIEC | Ubiquinone biosynthesis O-methyltransferase OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=ubiG PE=3 SV=1 | 48 | 154 | 6.0E-06 |
| sp|C3K6J1|UBIG_PSEFS | Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas fluorescens (strain SBW25) GN=ubiG PE=3 SV=1 | 48 | 153 | 7.0E-06 |
| sp|Q1IDA6|UBIG_PSEE4 | Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas entomophila (strain L48) GN=ubiG PE=3 SV=1 | 48 | 153 | 7.0E-06 |
| sp|B0KTX4|UBIG_PSEPG | Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas putida (strain GB-1) GN=ubiG PE=3 SV=1 | 48 | 153 | 8.0E-06 |
| sp|Q4K8M4|UBIG_PSEF5 | Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=ubiG PE=3 SV=1 | 48 | 153 | 8.0E-06 |
| sp|A8H499|UBIG_SHEPA | Ubiquinone biosynthesis O-methyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=ubiG PE=3 SV=1 | 11 | 153 | 8.0E-06 |
| sp|Q88M10|UBIG_PSEPK | Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas putida (strain KT2440) GN=ubiG PE=3 SV=1 | 48 | 153 | 8.0E-06 |
| sp|A5W7G3|UBIG_PSEP1 | Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=ubiG PE=3 SV=1 | 48 | 153 | 8.0E-06 |
| sp|Q3K8T6|UBIG_PSEPF | Ubiquinone biosynthesis O-methyltransferase OS=Pseudomonas fluorescens (strain Pf0-1) GN=ubiG PE=3 SV=1 | 48 | 153 | 8.0E-06 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0008168 | methyltransferase activity | Yes |
| GO:0003824 | catalytic activity | No |
| GO:0016740 | transferase activity | No |
| GO:0003674 | molecular_function | No |
| GO:0016741 | transferase activity, transferring one-carbon groups | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|063200 MSNYSLSNKDYYDQLGEQNFDAPHALELARRAANVFRRAYDFDEGETRVLDFACGVGHLSRELVPYVKSIVGVDI SQRMVDEYNRRSLNQGIEPEEMRAIQADILLSSTSSELQEMKGTYDVVVCAAAYHHFDDITVMTRALVEFLKPGG MLLVLDLLKDENVDTEELFPEHRKHDIVAHRGGLSKAQMEEAFVAAAGLQSFKMSDAIKARKRGHPTTLFLAQGI RLEITSVDRIR* |
| Coding | >Agabi119p4|063200 ATGTCCAATTATAGTCTATCCAACAAAGACTACTATGACCAATTAGGAGAGCAGAATTTCGATGCTCCTCACGCA CTCGAGTTGGCAAGAAGGGCTGCTAATGTTTTTCGCCGGGCATATGATTTCGACGAGGGCGAGACCAGAGTTTTG GATTTCGCATGCGGCGTAGGTCATTTGTCAAGGGAATTGGTTCCATACGTTAAATCTATCGTGGGCGTGGATATC AGTCAACGGATGGTAGACGAGTATAATCGCCGATCTCTCAATCAAGGGATTGAGCCAGAAGAAATGCGGGCTATT CAAGCAGACATCCTCCTCTCCTCGACGTCGAGCGAACTTCAAGAAATGAAGGGAACCTATGACGTCGTTGTCTGT GCTGCTGCCTACCACCATTTTGATGATATTACTGTCATGACAAGAGCCCTCGTCGAGTTCCTGAAACCGGGCGGC ATGTTGCTTGTTTTGGATCTTTTGAAGGACGAGAACGTTGATACTGAGGAGTTGTTTCCCGAGCACAGAAAACAT GATATTGTGGCTCATCGAGGGGGACTTTCGAAAGCTCAAATGGAGGAGGCCTTTGTCGCGGCTGCTGGCCTTCAG TCGTTTAAAATGAGTGACGCGATCAAGGCTAGAAAACGAGGGCATCCAACTACTCTTTTCCTCGCTCAAGGTATT AGATTAGAGATCACATCGGTTGATCGTATTCGTTAG |
| Transcript | >Agabi119p4|063200 ATGTCCAATTATAGTCTATCCAACAAAGACTACTATGACCAATTAGGAGAGCAGAATTTCGATGCTCCTCACGCA CTCGAGTTGGCAAGAAGGGCTGCTAATGTTTTTCGCCGGGCATATGATTTCGACGAGGGCGAGACCAGAGTTTTG GATTTCGCATGCGGCGTAGGTCATTTGTCAAGGGAATTGGTTCCATACGTTAAATCTATCGTGGGCGTGGATATC AGTCAACGGATGGTAGACGAGTATAATCGCCGATCTCTCAATCAAGGGATTGAGCCAGAAGAAATGCGGGCTATT CAAGCAGACATCCTCCTCTCCTCGACGTCGAGCGAACTTCAAGAAATGAAGGGAACCTATGACGTCGTTGTCTGT GCTGCTGCCTACCACCATTTTGATGATATTACTGTCATGACAAGAGCCCTCGTCGAGTTCCTGAAACCGGGCGGC ATGTTGCTTGTTTTGGATCTTTTGAAGGACGAGAACGTTGATACTGAGGAGTTGTTTCCCGAGCACAGAAAACAT GATATTGTGGCTCATCGAGGGGGACTTTCGAAAGCTCAAATGGAGGAGGCCTTTGTCGCGGCTGCTGGCCTTCAG TCGTTTAAAATGAGTGACGCGATCAAGGCTAGAAAACGAGGGCATCCAACTACTCTTTTCCTCGCTCAAGGTATT AGATTAGAGATCACATCGGTTGATCGTATTCGTTAG |
| Gene | >Agabi119p4|063200 ATGTCCAATTATAGTCTATCCAACAAAGACTACTATGACCAATTAGGAGAGCAGAATTTCGATGCTCCTCACGCA CTCGAGTTGGCAAGAAGGTTATTATCACATTCCTAACGTATCGTTCTCGGACATTACATTTGCATCACACATCAC AAAGCTGTCATGTAAATGGGTTTCTATCAGTTTCAGTAGTTGTGCTATTTTCTAAGGGTGTTGCGGATGATCAAC TCACATAGATGCATCTATCAATTTTAGGGCTGCTAATGTTTTTCGCCGGGCATATGATTTCGACGAGGGCGAGAC CAGAGTTTTGGATTTCGCATGCGGCGTAGGTGCGTGAAACACATTTTTAATCTCTTTCGCCTGTGTATGAATTAT TTTTACGCCGCGCCAGGTCATTTGTCAAGGGAATTGGTTCCATACGTTAAATCTATCGTGGGCGTGGATATCAGT CAACGGATGGTAGACGAGTATAATCGCCGATCTCTCAATCAAGGGATTGAGCCAGAAGAAATGCGGGCTATTCAA GCAGACATCCTCCTCTCCTCGACGTCGAGCGAACTTCAAGAAATGAAGGGAACCTATGACGTCGTTGTCGTAAGT CGATATATTAACATATATAACAAGTTCCCGAGATTAATCTTAGGACAAGTGTGCTGCTGCCTACCACCATTTTGA TGATATTACTGTCATGACAAGAGCCCTCGTCGAGTTCCTGAAACCGGGCGGCATGTTGCTTGTTTTGGATCTTTT GAAGGACGAGAACGTTGATACTGAGGAGTTGTTTCCCGAGCACAGAAAACATGATATTGTGGCTCATCGAGGGGG ACTTTCGAAAGCTCAAATGGAGGAGGCCTTTGTCGCGGCTGCTGGCCTTCAGTCGTTTAAAATGAGTGACGCGAT CAAGGCTAGAAAACGAGGGCATCCAACTACTCTTTTCCTCGCTCAAGGTATTAGATTAGAGATCACATCGGTTGA TCGTATTCGTTAG |