Fungal Genomics

General Properties

Protein ID	Agabi119p4|063120
Gene name
Location	scaffold_03b:628324..629617
Strand	+
Gene length (bp)	1293
Transcript length (bp)	1176
Coding sequence length (bp)	1176
Protein length (aa)	392

Overview

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	6.6E-06	5	51

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	4446
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|063120
Agaricus bisporus var bisporus H97	AgabiH97|063120
Agaricus bisporus var burnettii H119p4	Agabi119p4|063120 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|063120 MSNFEDLPDDVFLEISKSLLPQKENLCNLRLVSRRLSKLVSHLLFHRLVIRTGKETRQGATTLAESSIISVIASG STTVFEHTKELKILVYSFDPPPPFYLRSFSNLTEFSGSWFCKAPSHTISEIASLLPRCPNLTRLRLGNVFNSGTT LNDIFFETGMMEKSLELKELQLQGFVVSPDAFEHYVRHFKCLTSLAITQNRSRSASTDFGEICNILRRNNIYLEH IVADHPEDLPLLSYLSSYSGLTRLTLESQSGGTGSFEAVNMFYTQVLPKQAEVLEELRLCFHDAPRVWRKTPTVN QLAGLTQCHKLRTLVVSSLFTFEFKEEDARRIWEFWFEVGLQLPGLEHMSVIPVNPYTWHGEFYTSVAWRAIRND VLEQYQKEKNLRFAVN*
Coding	>Agabi119p4|063120 ATGTCCAATTTCGAGGACCTCCCCGATGACGTTTTTCTAGAAATCTCCAAATCTCTTCTGCCTCAGAAAGAAAAT CTATGCAATCTTCGTCTTGTCTCAAGGCGCTTAAGCAAACTCGTTAGCCATCTGCTCTTTCATCGACTCGTTATC CGAACTGGCAAGGAAACAAGGCAAGGAGCAACTACGCTGGCTGAATCTAGCATTATCTCTGTAATCGCATCTGGC TCAACAACCGTCTTCGAGCACACAAAGGAGCTGAAAATTCTTGTATACTCTTTTGACCCACCTCCCCCTTTCTAC CTCAGGTCTTTTTCCAATCTCACCGAATTCTCGGGATCGTGGTTTTGCAAAGCTCCGAGTCACACTATATCTGAA ATCGCTTCTCTCTTGCCACGATGTCCCAACTTGACCCGGCTCAGACTTGGAAATGTTTTCAATAGTGGTACCACT TTGAACGATATCTTTTTCGAGACAGGAATGATGGAGAAGTCATTGGAACTCAAGGAGCTCCAGTTACAAGGCTTT GTAGTCTCTCCTGACGCTTTCGAGCACTACGTCCGCCATTTCAAATGCTTAACGTCACTTGCTATCACTCAAAAC AGGAGCCGCAGCGCGTCCACGGACTTCGGAGAAATTTGCAATATTCTCCGACGAAATAACATCTATTTAGAGCAT ATAGTAGCTGATCATCCAGAAGATCTCCCCTTACTCTCTTATCTTTCCTCGTACTCGGGGTTGACGAGGCTCACA CTTGAATCGCAATCTGGAGGAACGGGGAGTTTTGAAGCTGTTAATATGTTCTATACTCAAGTTTTACCAAAGCAA GCAGAGGTCCTGGAAGAATTGCGATTGTGTTTTCATGATGCTCCGCGAGTATGGCGCAAGACGCCGACAGTGAAT CAGCTTGCGGGGCTTACGCAATGCCACAAGCTCAGGACCTTGGTCGTTTCGTCCCTCTTCACATTTGAGTTTAAA GAAGAAGACGCCCGAAGAATTTGGGAGTTTTGGTTTGAAGTCGGTTTGCAGCTTCCGGGCTTGGAACATATGTCT GTCATACCCGTCAACCCATATACATGGCACGGGGAGTTCTACACCTCAGTGGCTTGGCGGGCAATTAGGAACGAT GTTTTGGAACAATATCAGAAGGAAAAGAACCTTAGGTTTGCGGTAAACTAA
Transcript	>Agabi119p4|063120 ATGTCCAATTTCGAGGACCTCCCCGATGACGTTTTTCTAGAAATCTCCAAATCTCTTCTGCCTCAGAAAGAAAAT CTATGCAATCTTCGTCTTGTCTCAAGGCGCTTAAGCAAACTCGTTAGCCATCTGCTCTTTCATCGACTCGTTATC CGAACTGGCAAGGAAACAAGGCAAGGAGCAACTACGCTGGCTGAATCTAGCATTATCTCTGTAATCGCATCTGGC TCAACAACCGTCTTCGAGCACACAAAGGAGCTGAAAATTCTTGTATACTCTTTTGACCCACCTCCCCCTTTCTAC CTCAGGTCTTTTTCCAATCTCACCGAATTCTCGGGATCGTGGTTTTGCAAAGCTCCGAGTCACACTATATCTGAA ATCGCTTCTCTCTTGCCACGATGTCCCAACTTGACCCGGCTCAGACTTGGAAATGTTTTCAATAGTGGTACCACT TTGAACGATATCTTTTTCGAGACAGGAATGATGGAGAAGTCATTGGAACTCAAGGAGCTCCAGTTACAAGGCTTT GTAGTCTCTCCTGACGCTTTCGAGCACTACGTCCGCCATTTCAAATGCTTAACGTCACTTGCTATCACTCAAAAC AGGAGCCGCAGCGCGTCCACGGACTTCGGAGAAATTTGCAATATTCTCCGACGAAATAACATCTATTTAGAGCAT ATAGTAGCTGATCATCCAGAAGATCTCCCCTTACTCTCTTATCTTTCCTCGTACTCGGGGTTGACGAGGCTCACA CTTGAATCGCAATCTGGAGGAACGGGGAGTTTTGAAGCTGTTAATATGTTCTATACTCAAGTTTTACCAAAGCAA GCAGAGGTCCTGGAAGAATTGCGATTGTGTTTTCATGATGCTCCGCGAGTATGGCGCAAGACGCCGACAGTGAAT CAGCTTGCGGGGCTTACGCAATGCCACAAGCTCAGGACCTTGGTCGTTTCGTCCCTCTTCACATTTGAGTTTAAA GAAGAAGACGCCCGAAGAATTTGGGAGTTTTGGTTTGAAGTCGGTTTGCAGCTTCCGGGCTTGGAACATATGTCT GTCATACCCGTCAACCCATATACATGGCACGGGGAGTTCTACACCTCAGTGGCTTGGCGGGCAATTAGGAACGAT GTTTTGGAACAATATCAGAAGGAAAAGAACCTTAGGTTTGCGGTAAACTAA
Gene	>Agabi119p4|063120 ATGTCCAATTTCGAGGACCTCCCCGATGACGTTTTTCTAGAAATCTCCAAATCTGTGAGTAGCACTCGACAATCT CCTCATACACAGTGATTCATCATGTACCCTTGTCTAGCTTCTGCCTCAGAAAGAAAATCTATGCAATCTTCGTCT TGTCTCAAGGCGCTTAAGCAAACTCGTTAGCCATCTGCTCTTTCATCGACTCGTTATCCGAACTGGCAAGGAAAC AAGGCAAGGAGCAACTACGCTGGCTGAATCTAGCATTATCTCTGTAATCGCATCTGGCTCAACAACCGTCTTCGA GCACACAAAGGAGCTGAAAATTCTTGTATACTCTTTTGACCCACCTCCCCCTTTCTACCTCAGGTCTTTTTCCAA TCTCACCGAATTCTCGGGATCGTGGTTTTGCAAAGCTCCGAGTCACACTATATCTGAAATCGCTTCTCTCTTGCC ACGATGTCCCAACTTGACCCGGCTCAGACTTGGAAATGTTTTCAATAGTGGTACCACTTTGAACGATATCTTTTT CGAGACAGGAATGATGGAGAAGTCATTGGAACTCAAGGAGCTCCAGTTACAAGGCTTTGTAGTCTCTCCTGACGC TTTCGAGCACTACGTCCGCCATTTCAAATGCTTAACGTCACTTGCTATCACTCAAAACAGGAGCCGCAGCGCGTC CACGGACTTCGGAGAAATTTGCAATATTCTCCGACGAAATAACATCTATTTAGAGCATATAGTAGCTGATCATCC AGAAGATCTCCCCTTACTCTCTTATCTTTCCTCGTACTCGGGGTTGACGAGGCTCACACTTGAATCGCAATCTGG AGGAACGGGGAGTTTTGAAGCTGTTAATATGTTCTATACTCAAGTTTTACCAAAGCAAGCAGAGGTCCTGGAAGA ATTGCGATTGTGTTTTCATGATGCTCCGCGAGTATGGCGCAAGACGCCGACAGTGAATCAGCTTGCGGGGCTTAC GCAATGCCACAAGCTCAGGACCTTGGTCGTTTCGTCCCTCTTCACATTTGAGTTTAAAGAAGAAGACGCCCGAAG AATTTGGGCAAGTGCTTTGTCTCCTTCATCTCAGCTTGCCGATTTATTTTTTTGTTTGGATTCTAGGAGTTTTGG TTTGAAGTCGGTTTGCAGCTTCCGGGCTTGGAACATATGTCTGTCATACCCGTCAACCCATATACATGGCACGGG GAGTTCTACACCTCAGTGGCTTGGCGGGCAATTAGGAACGATGTTTTGGAACAATATCAGAAGGAAAAGAACCTT AGGTTTGCGGTAAACTAA