Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|062610
Gene name
Locationscaffold_03b:536034..536718
Strand+
Gene length (bp)684
Transcript length (bp)531
Coding sequence length (bp)531
Protein length (aa) 177

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01883 FeS_assembly_P Iron-sulfur cluster assembly protein 7.9E-14 51 123

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q9C9G6|AE7_ARATH Protein AE7 OS=Arabidopsis thaliana GN=AE7 PE=1 SV=2 1 164 1.0E-48
sp|Q9VTC4|U195A_DROME MIP18 family protein CG7949 OS=Drosophila melanogaster GN=CG7949 PE=1 SV=1 1 168 6.0E-48
sp|Q9D187|MIP18_MOUSE Mitotic spindle-associated MMXD complex subunit MIP18 OS=Mus musculus GN=Fam96b PE=1 SV=1 48 164 9.0E-48
sp|Q9Y3D0|MIP18_HUMAN Mitotic spindle-associated MMXD complex subunit MIP18 OS=Homo sapiens GN=FAM96B PE=1 SV=1 48 164 2.0E-47
sp|Q54QK1|FA96B_DICDI MIP18 family protein FAM96B OS=Dictyostelium discoideum GN=fam96B PE=3 SV=2 7 165 2.0E-42
[Show all]
[Show less]
Swissprot ID Swissprot Description Start End E-value
sp|Q9C9G6|AE7_ARATH Protein AE7 OS=Arabidopsis thaliana GN=AE7 PE=1 SV=2 1 164 1.0E-48
sp|Q9VTC4|U195A_DROME MIP18 family protein CG7949 OS=Drosophila melanogaster GN=CG7949 PE=1 SV=1 1 168 6.0E-48
sp|Q9D187|MIP18_MOUSE Mitotic spindle-associated MMXD complex subunit MIP18 OS=Mus musculus GN=Fam96b PE=1 SV=1 48 164 9.0E-48
sp|Q9Y3D0|MIP18_HUMAN Mitotic spindle-associated MMXD complex subunit MIP18 OS=Homo sapiens GN=FAM96B PE=1 SV=1 48 164 2.0E-47
sp|Q54QK1|FA96B_DICDI MIP18 family protein FAM96B OS=Dictyostelium discoideum GN=fam96B PE=3 SV=2 7 165 2.0E-42
sp|Q9H5X1|FA96A_HUMAN MIP18 family protein FAM96A OS=Homo sapiens GN=FAM96A PE=1 SV=1 17 164 3.0E-42
sp|Q9DCL2|FA96A_MOUSE MIP18 family protein FAM96A OS=Mus musculus GN=Fam96a PE=1 SV=1 17 164 2.0E-41
sp|Q3T0U7|FA96A_BOVIN MIP18 family protein FAM96A OS=Bos taurus GN=FAM96A PE=2 SV=1 17 164 3.0E-41
sp|A8MR89|AEL1_ARATH Protein AE7-like 1 OS=Arabidopsis thaliana GN=AEL1 PE=3 SV=1 1 164 6.0E-41
sp|O62252|U195_CAEEL MIP18 family protein F45G2.10 OS=Caenorhabditis elegans GN=F45G2.10 PE=1 SV=1 7 165 1.0E-40
sp|Q9UTL0|YIVG_SCHPO MIP18 family protein C144.16 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC144.16 PE=3 SV=1 1 157 6.0E-39
sp|Q9V968|U195B_DROME MIP18 family protein CG30152 OS=Drosophila melanogaster GN=CG30152 PE=1 SV=1 53 166 6.0E-39
sp|P38829|YHS2_YEAST MIP18 family protein YHR122W OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YHR122W PE=1 SV=1 46 164 4.0E-36
sp|Q9SR25|AEL2_ARATH Protein AE7-like 2 OS=Arabidopsis thaliana GN=AEL2 PE=2 SV=2 57 157 7.0E-32
sp|Q9GPR0|FA96A_DICDI MIP18 family protein FAM96A OS=Dictyostelium discoideum GN=fam96A PE=3 SV=1 47 166 4.0E-31
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GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|062610
MPTEVFNPNPVIFSSTKILGRKSELLSRSLWIDESTSDDDEVDGVELIDPDEIFDLIRSIYDPEHPNTLEELRVV
SSPQIKIEQNRVIIEFTPTVPHCGMSTLIGLCIRVRLLRSLPTRFKVDIFLKPGSHQSEYAVNKQLNDKERVAAA
LENPVLLDTVEQCLRDAGLRGQSASA*
Coding >Agabi119p4|062610
ATGCCGACCGAAGTTTTCAACCCCAATCCTGTCATTTTCTCTTCGACAAAGATCCTAGGTCGTAAATCTGAACTG
CTCTCACGTTCGTTATGGATTGATGAGTCAACGAGCGACGACGATGAAGTCGACGGTGTTGAGCTTATCGACCCC
GACGAAATATTTGACTTAATTCGTTCAATATACGACCCCGAGCATCCAAATACGCTAGAAGAACTTCGCGTTGTC
TCTTCTCCACAAATCAAAATCGAACAAAACCGGGTCATTATAGAATTTACTCCTACCGTCCCTCACTGTGGGATG
TCCACTTTGATCGGCCTTTGCATTCGGGTCCGCCTATTGCGTAGCCTTCCAACCCGATTCAAAGTGGATATCTTT
CTTAAACCAGGATCCCATCAAAGCGAGTACGCCGTCAATAAACAACTCAATGACAAGGAGCGGGTTGCTGCAGCG
CTGGAGAACCCTGTACTTTTGGACACGGTGGAACAATGTCTCCGAGACGCTGGTTTGCGCGGTCAGTCGGCGAGC
GCATGA
Transcript >Agabi119p4|062610
ATGCCGACCGAAGTTTTCAACCCCAATCCTGTCATTTTCTCTTCGACAAAGATCCTAGGTCGTAAATCTGAACTG
CTCTCACGTTCGTTATGGATTGATGAGTCAACGAGCGACGACGATGAAGTCGACGGTGTTGAGCTTATCGACCCC
GACGAAATATTTGACTTAATTCGTTCAATATACGACCCCGAGCATCCAAATACGCTAGAAGAACTTCGCGTTGTC
TCTTCTCCACAAATCAAAATCGAACAAAACCGGGTCATTATAGAATTTACTCCTACCGTCCCTCACTGTGGGATG
TCCACTTTGATCGGCCTTTGCATTCGGGTCCGCCTATTGCGTAGCCTTCCAACCCGATTCAAAGTGGATATCTTT
CTTAAACCAGGATCCCATCAAAGCGAGTACGCCGTCAATAAACAACTCAATGACAAGGAGCGGGTTGCTGCAGCG
CTGGAGAACCCTGTACTTTTGGACACGGTGGAACAATGTCTCCGAGACGCTGGTTTGCGCGGTCAGTCGGCGAGC
GCATGA
Gene >Agabi119p4|062610
ATGCCGACCGAAGTTTTCAACCCCAATCCTGTCATTTTCTCTTCGACAAAGATCCTAGGTCGTAAATCTGAACTG
CTCTCACGTTCGTTATGGATTGATGAGTCAACGAGCGACGACGATGAAGTCGACGGTGTTGAGCTTATCGACCCC
GACGAAATATTTGGTACGCCTTCCTTACCTTTCTTATGTCACCTGCGCTCACTCAGAAAGCCAGACTTAATTCGT
TCAATATACGACCCCGAGCATCCAAATACGCTAGAAGAACTTCGCGTTGTCTCTTCTCCACAAATCAAAATCGAA
CAAAACCGGGTCATTATAGAATTTACTCCTACCGTCCCTCACTGTGGGATGTCCACTTTGATCGGTTGCGTATAT
CTCTACATCTCCGATAAAATTAGCTTCTAATAAACCTTATCAGGCCTTTGCATTCGGGTCCGCCTATTGCGTAGC
CTTCCAACCCGATTCAAAGTGGATATCTTTCTTAAACCAGGATCCCATCAAAGCGAGTACGCCGGTGGGTTTTTC
TTAAATTATCCTTCAGCCGAATCTCACATGGCATCAGTCAATAAACAACTCAATGACAAGGAGCGGGTTGCTGCA
GCGCTGGAGAACCCTGTACTTTTGGACACGGTGGAACAATGTCTCCGAGACGCTGGTTTGCGCGGTCAGTCGGCG
AGCGCATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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