Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|062140
Gene name
Locationscaffold_03b:415922..416698
Strand+
Gene length (bp)776
Transcript length (bp)540
Coding sequence length (bp)540
Protein length (aa) 180

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08241 Methyltransf_11 Methyltransferase domain 1.0E-06 59 144

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q10224|TRM9_SCHPO tRNA (carboxymethyluridine(34)-5-O)-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=trm9 PE=3 SV=1 18 169 9.0E-33
sp|Q07G10|ALKB8_XENTR Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis GN=alkbh8 PE=2 SV=2 12 156 2.0E-30
sp|P49957|TRM9_YEAST tRNA (carboxymethyluridine(34)-5-O)-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRM9 PE=1 SV=1 16 162 1.0E-28
sp|Q80Y20|ALKB8_MOUSE Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus GN=Alkbh8 PE=1 SV=1 19 156 3.0E-28
sp|Q95K79|ALKB8_MACFA Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis GN=ALKBH8 PE=2 SV=1 12 156 4.0E-27
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Swissprot ID Swissprot Description Start End E-value
sp|Q10224|TRM9_SCHPO tRNA (carboxymethyluridine(34)-5-O)-methyltransferase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=trm9 PE=3 SV=1 18 169 9.0E-33
sp|Q07G10|ALKB8_XENTR Alkylated DNA repair protein alkB homolog 8 OS=Xenopus tropicalis GN=alkbh8 PE=2 SV=2 12 156 2.0E-30
sp|P49957|TRM9_YEAST tRNA (carboxymethyluridine(34)-5-O)-methyltransferase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TRM9 PE=1 SV=1 16 162 1.0E-28
sp|Q80Y20|ALKB8_MOUSE Alkylated DNA repair protein alkB homolog 8 OS=Mus musculus GN=Alkbh8 PE=1 SV=1 19 156 3.0E-28
sp|Q95K79|ALKB8_MACFA Alkylated DNA repair protein alkB homolog 8 OS=Macaca fascicularis GN=ALKBH8 PE=2 SV=1 12 156 4.0E-27
sp|Q96BT7|ALKB8_HUMAN Alkylated DNA repair protein alkB homolog 8 OS=Homo sapiens GN=ALKBH8 PE=1 SV=2 12 156 4.0E-27
sp|A1A4L5|ALKB8_BOVIN Alkylated DNA repair protein alkB homolog 8 OS=Bos taurus GN=ALKBH8 PE=2 SV=1 12 156 3.0E-25
sp|Q9P272|K1456_HUMAN Probable tRNA methyltransferase 9-like protein OS=Homo sapiens GN=KIAA1456 PE=2 SV=3 11 156 1.0E-19
sp|Q08DH3|K1456_BOVIN Probable tRNA methyltransferase 9-like protein OS=Bos taurus PE=2 SV=1 11 156 7.0E-19
sp|Q80WQ4|K1456_MOUSE Probable tRNA methyltransferase 9-like protein OS=Mus musculus GN=Kiaa1456 PE=1 SV=1 11 156 2.0E-18
sp|C4V9L5|Y1265_NOSCE Putative methyltransferase NCER_101265 OS=Nosema ceranae (strain BRL01) GN=NCER_101265 PE=3 SV=1 16 156 1.0E-17
sp|Q8STN5|Y9F0_ENCCU Putative methyltransferase ECU09_1500 OS=Encephalitozoon cuniculi (strain GB-M1) GN=ECU09_1500 PE=3 SV=2 14 156 1.0E-17
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GO

GO Term Description Terminal node
GO:0008168 methyltransferase activity Yes
GO:0003824 catalytic activity No
GO:0016740 transferase activity No
GO:0003674 molecular_function No
GO:0016741 transferase activity, transferring one-carbon groups No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|062140
MPPKAVAEVTIDIDPATYETQNVHAIYDTIASHFSSTRYKPWPIIAKFLSEIPDGWIGLDSGTGNGKYLSLDRDG
KTWMVGLDRSINLLKFAQNAGDKAREVVLGNVLDHCWRTHAFDFAISIATIHHLATPSRRVLAVQRLLQAVSPKN
GRVLIYDGARRRRAMGFVEIEHCAKSKIT*
Coding >Agabi119p4|062140
ATGCCACCCAAGGCTGTTGCCGAGGTCACTATTGACATCGATCCTGCTACTTATGAAACTCAAAATGTCCATGCA
ATCTACGATACGATCGCTAGCCATTTTTCAAGCACTAGGTACAAACCATGGCCTATCATCGCGAAATTTCTCTCT
GAGATACCTGATGGCTGGATTGGATTAGACTCTGGAACAGGCAATGGAAAGTATCTCTCACTCGATCGGGACGGA
AAAACCTGGATGGTTGGGCTGGATAGAAGTATCAACCTACTCAAATTTGCTCAAAATGCCGGAGATAAGGCCCGA
GAGGTTGTTTTGGGAAATGTATTGGATCATTGCTGGAGGACACACGCTTTTGACTTCGCAATTTCAATTGCTACA
ATACACCATCTCGCCACGCCTTCGAGGCGAGTGCTTGCAGTCCAACGTCTGCTCCAAGCAGTGTCACCTAAAAAT
GGTCGCGTCCTTATTTATGACGGGGCAAGACGTCGTCGTGCCATGGGTTTTGTCGAAATCGAACATTGCGCAAAA
TCCAAAATCACCTAG
Transcript >Agabi119p4|062140
ATGCCACCCAAGGCTGTTGCCGAGGTCACTATTGACATCGATCCTGCTACTTATGAAACTCAAAATGTCCATGCA
ATCTACGATACGATCGCTAGCCATTTTTCAAGCACTAGGTACAAACCATGGCCTATCATCGCGAAATTTCTCTCT
GAGATACCTGATGGCTGGATTGGATTAGACTCTGGAACAGGCAATGGAAAGTATCTCTCACTCGATCGGGACGGA
AAAACCTGGATGGTTGGGCTGGATAGAAGTATCAACCTACTCAAATTTGCTCAAAATGCCGGAGATAAGGCCCGA
GAGGTTGTTTTGGGAAATGTATTGGATCATTGCTGGAGGACACACGCTTTTGACTTCGCAATTTCAATTGCTACA
ATACACCATCTCGCCACGCCTTCGAGGCGAGTGCTTGCAGTCCAACGTCTGCTCCAAGCAGTGTCACCTAAAAAT
GGTCGCGTCCTTATTTATGACGGGGCAAGACGTCGTCGTGCCATGGGTTTTGTCGAAATCGAACATTGCGCAAAA
TCCAAAATCACCTAG
Gene >Agabi119p4|062140
ATGCCACCCAAGGCTGTTGCCGAGGTCACTATTGACATCGATCCTGCTACTTATGAAACTCAAAATGTCCATGCA
ATCTACGATACGATCGCTAGCCATTTTTCAAGCACTAGGTACAAAGTAATGGACACTGGTCTTCTCCGTCTTGTC
GTTCATTCTTGACATCATACTTGAGTTAGCCATGGCCTATCATCGCGAAATTTCTCTCTGAGATACCTGATGGCT
GGATTGGATTAGACTCTGGAACAGGCAATGGAAAGTATCTCTCACTCGATCGGGACGGAAAAACCTGGATGGTTG
GGCTGGATAGAAGTATCAACCTACTCAAATTTGCTCAAAATGCCGGAGATAAGGCCCGAGAGGTTGTTTTGGGAA
ATGTATTGGATCATTGCTGGAGGACACACGCTTTTGTATGTGAAAGCAGATGTTATTTAGGATAGCTCATCTGGA
ATATTGACTGTAGGACTTCGCAATTTCAATTGCTACAATACACCATCTCGCCACGCCTTCGAGGCGAGTGCTTGC
AGTCCAAGTGGGATTTCATCTCCCTTTACGACAATATTTACGTTTCTGAACGCAATCTACCAGCGTCTGCTCCAA
GCAGTGTCACCTAAAAATGGTCGCGTCCTTATTTATGTATGGGCCATCGAACAAGACGAGTTGTCAAAAAGGATT
ATACCACAAGGCGAGCGTAATGAAACAAGGACGGGGCAAGACGTCGTCGTGCCATGGGTTTTGTCGAAATCGAAC
ATTGCGCAAAATCCAAAATCACCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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