© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Agabi119p4|061530 |
| Gene name | |
| Location | scaffold_03b:261644..264820 |
| Strand | + |
| Gene length (bp) | 3176 |
| Transcript length (bp) | 2403 |
| Coding sequence length (bp) | 2403 |
| Protein length (aa) | 801 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03200 | Glyco_hydro_63 | Glycosyl hydrolase family 63 C-terminal domain | 1.2E-165 | 291 | 798 |
| PF16923 | Glyco_hydro_63N | Glycosyl hydrolase family 63 N-terminal domain | 1.6E-77 | 21 | 246 |
| PF01204 | Trehalase | Trehalase | 1.3E-05 | 588 | 776 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14255|GCS1_SCHPO | Probable mannosyl-oligosaccharide glucosidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6G10.09 PE=3 SV=1 | 3 | 800 | 0.0E+00 |
| sp|P53008|CWH41_YEAST | Mannosyl-oligosaccharide glucosidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CWH41 PE=1 SV=1 | 18 | 797 | 3.0E-167 |
| sp|Q80UM7|MOGS_MOUSE | Mannosyl-oligosaccharide glucosidase OS=Mus musculus GN=Mogs PE=1 SV=1 | 1 | 800 | 4.0E-122 |
| sp|O88941|MOGS_RAT | Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus GN=Mogs PE=1 SV=1 | 1 | 800 | 2.0E-119 |
| sp|Q13724|MOGS_HUMAN | Mannosyl-oligosaccharide glucosidase OS=Homo sapiens GN=MOGS PE=1 SV=5 | 9 | 800 | 6.0E-119 |
| Swissprot ID | Swissprot Description | Start | End | E-value |
|---|---|---|---|---|
| sp|O14255|GCS1_SCHPO | Probable mannosyl-oligosaccharide glucosidase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAC6G10.09 PE=3 SV=1 | 3 | 800 | 0.0E+00 |
| sp|P53008|CWH41_YEAST | Mannosyl-oligosaccharide glucosidase OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CWH41 PE=1 SV=1 | 18 | 797 | 3.0E-167 |
| sp|Q80UM7|MOGS_MOUSE | Mannosyl-oligosaccharide glucosidase OS=Mus musculus GN=Mogs PE=1 SV=1 | 1 | 800 | 4.0E-122 |
| sp|O88941|MOGS_RAT | Mannosyl-oligosaccharide glucosidase OS=Rattus norvegicus GN=Mogs PE=1 SV=1 | 1 | 800 | 2.0E-119 |
| sp|Q13724|MOGS_HUMAN | Mannosyl-oligosaccharide glucosidase OS=Homo sapiens GN=MOGS PE=1 SV=5 | 9 | 800 | 6.0E-119 |
| sp|F4HTM3|GCS1_ARATH | Mannosyl-oligosaccharide glucosidase GCS1 OS=Arabidopsis thaliana GN=GCS1 PE=1 SV=1 | 12 | 800 | 2.0E-114 |
| sp|Q84M89|GCS2_ARATH | Alpha-glucosidase 2 OS=Arabidopsis thaliana GN=GCS2 PE=2 SV=1 | 12 | 800 | 3.0E-108 |
| sp|Q19426|MOGS1_CAEEL | Mannosyl-oligosaccharide glucosidase OS=Caenorhabditis elegans GN=mogs-1 PE=1 SV=2 | 19 | 798 | 5.0E-98 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0004555 | alpha,alpha-trehalase activity | Yes |
| GO:0005991 | trehalose metabolic process | Yes |
| GO:0005975 | carbohydrate metabolic process | No |
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | No |
| GO:0005984 | disaccharide metabolic process | No |
| GO:0009987 | cellular process | No |
| GO:0003674 | molecular_function | No |
| GO:0016798 | hydrolase activity, acting on glycosyl bonds | No |
| GO:0008152 | metabolic process | No |
| GO:0008150 | biological_process | No |
| GO:0016787 | hydrolase activity | No |
| GO:0044238 | primary metabolic process | No |
| GO:0071704 | organic substance metabolic process | No |
| GO:0003824 | catalytic activity | No |
| GO:0044262 | cellular carbohydrate metabolic process | No |
| GO:0015927 | trehalase activity | No |
| GO:0009311 | oligosaccharide metabolic process | No |
| GO:0044237 | cellular metabolic process | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 16 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Agabi119p4|061530 MRLALLLLLLPAALASEVNDTLLWGPYRPNLYFGLRPRLPQSLMTGLMWFGTHDYTSIQHARHACEQNDKLDSYT WTEFDTRQGGVQVIKDSINNVKLTTEFLKVAGGDHGGSWAARIKGEPIDPLKPSQISTLFYFGLEGLGGLEMETE EDENGIDGPVKLSGSTPDLDEFTLRIVDDADNKGVTSGQHAEDFEARHGKTHFVGRRLSSGDIWQAREHLLKDLV ERARELVGPYREAEKGLPHPSWLFQLPNDVYTGSNLFAFQKSFDGPFKFDVFYESASAKQKLSSATLDQGIPALA DAYRARFTDVFPYPKDFPTEDKDKLEGFSRAVTSNLFGGVGYFYGNSVINKKFSYEWDEEEDNSVEGDEGETGAK LTEPKALLTATPSRSFFPRGFYWDEGFHLLHIGQWDNDFSLEILKSWIGLIDDNGWVAREQILGDEARSKVPAEF LTQVPNYANPPTLTMAVTAFIKRLKAKKEGPSNEDLGMGFEMGTAQNVFTADGSTVESQYLNDPDLALSFLKSIY NPLKRHYDWFRRTQRGQIKQYGRKARSRTEAYRWRGRSEMHVLTSGMDDYPRGPPHAGELHLDLISWMAFFTRTM RDIAEFIEEKEDAITYIEIEKAILNNIEDLHWNEEDQMYCDANIDDDDESYHVCHTGYLSLFPFLLELLPPNSPH LGAILDVLRDPEQLWSQYGLRSLSKSHPEFGQGENYWKGPIWVQMNYLALRALHNTYAAQEGPYQQKAKEIYDDL RKNVVNNVVKEYERTGYVWEQYDAVTGEGKRSHPFTGWTSLTSLILAEKY* |
| Coding | >Agabi119p4|061530 ATGCGTCTGGCGCTCCTTTTGCTGCTCTTGCCAGCCGCGTTGGCCTCAGAGGTCAATGATACCCTTCTATGGGGC CCATACAGACCCAATCTCTATTTTGGCCTCCGGCCACGCCTACCCCAATCATTAATGACGGGGCTCATGTGGTTC GGAACGCATGATTATACTTCTATCCAACATGCTCGTCATGCTTGCGAACAAAATGATAAACTGGACTCTTATACC TGGACAGAATTTGATACTCGGCAAGGCGGTGTCCAAGTGATCAAGGATAGCATAAACAATGTAAAGCTCACGACC GAGTTTCTAAAAGTCGCCGGAGGTGACCACGGCGGCAGCTGGGCTGCCCGTATCAAGGGCGAACCCATTGATCCC TTGAAACCATCTCAAATATCCACGTTGTTCTACTTTGGTCTTGAAGGACTAGGTGGTTTAGAAATGGAGACCGAA GAAGACGAAAACGGCATCGACGGACCTGTCAAGCTTAGTGGCTCTACTCCAGACCTGGATGAGTTCACACTCAGG ATTGTCGATGATGCCGACAACAAGGGTGTGACGTCGGGTCAACATGCAGAAGATTTTGAAGCTAGACACGGTAAA ACACATTTTGTCGGACGCCGATTGTCGTCTGGGGACATATGGCAAGCTAGAGAGCACCTCCTAAAGGACTTGGTC GAGCGTGCCCGAGAATTGGTCGGACCCTACAGGGAAGCAGAGAAAGGACTGCCTCACCCCTCTTGGCTCTTTCAA CTGCCGAATGACGTCTATACTGGGAGCAACCTATTCGCATTCCAGAAGTCCTTTGATGGGCCCTTCAAATTTGAT GTATTCTATGAGAGTGCAAGTGCCAAACAAAAATTGAGCTCTGCGACACTCGACCAAGGAATCCCTGCTCTTGCT GACGCTTATAGAGCAAGGTTCACAGATGTTTTCCCATATCCTAAAGACTTTCCTACTGAAGACAAAGACAAACTT GAAGGATTCTCTAGAGCAGTGACTTCTAACTTATTTGGCGGCGTCGGATATTTCTATGGTAATTCTGTCATTAAT AAGAAGTTTTCTTATGAGTGGGACGAAGAGGAAGACAATTCAGTCGAGGGTGATGAGGGCGAGACGGGCGCGAAG TTAACAGAACCCAAGGCTTTGTTGACTGCCACACCAAGTCGAAGTTTCTTCCCAAGAGGTTTCTACTGGGATGAG GGTTTCCACCTTCTCCATATTGGACAATGGGATAATGATTTCAGCTTGGAGATTCTGAAATCTTGGATTGGCCTG ATTGATGATAACGGTTGGGTTGCTCGTGAGCAAATTCTTGGCGATGAGGCGCGAAGCAAAGTTCCAGCAGAATTC CTGACTCAGGTTCCAAACTATGCCAATCCCCCCACATTAACAATGGCTGTCACCGCGTTTATCAAACGTCTCAAA GCTAAGAAAGAGGGCCCTTCGAACGAAGATTTGGGAATGGGCTTCGAGATGGGAACAGCTCAAAATGTTTTTACC GCCGACGGTTCGACTGTCGAGAGTCAATATTTGAATGATCCAGATCTCGCGCTTTCTTTCCTCAAATCGATCTAT AACCCTTTGAAAAGGCATTATGACTGGTTCAGACGTACTCAACGGGGCCAAATCAAACAGTATGGCAGAAAAGCT CGGTCGCGTACGGAAGCGTACAGGTGGCGTGGAAGATCGGAAATGCACGTACTCACCAGTGGTATGGATGATTAT CCGCGAGGGCCACCCCATGCGGGAGAGTTGCATTTGGACTTGATTTCTTGGATGGCATTCTTCACAAGAACGATG CGAGATATTGCAGAGTTCATTGAAGAGAAAGAAGACGCGATTACCTATATAGAGATCGAGAAGGCTATTCTGAAC AATATTGAAGATTTACACTGGAATGAAGAAGACCAAATGTACTGTGATGCCAATATAGATGATGATGACGAGTCA TACCATGTCTGCCACACGGGATACCTCTCTCTATTCCCATTCCTCCTAGAGTTACTTCCCCCCAATTCTCCTCAT TTAGGCGCTATCCTTGATGTTCTACGTGACCCTGAGCAACTGTGGTCCCAATATGGTCTGCGCAGTCTGTCGAAG TCGCACCCCGAATTCGGACAAGGTGAGAACTATTGGAAGGGCCCTATTTGGGTTCAAATGAACTACCTTGCTTTA CGGGCTTTGCACAATACCTACGCGGCTCAAGAGGGGCCATACCAGCAAAAAGCGAAGGAAATTTATGACGATTTA CGTAAAAATGTTGTGAATAATGTCGTGAAGGAGTATGAACGTACAGGATACGTTTGGGAGCAATACGATGCTGTT ACTGGAGAGGGTAAACGAAGTCATCCATTCACTGGTTGGACATCACTAACTTCACTGATTCTCGCGGAGAAGTAC TAA |
| Transcript | >Agabi119p4|061530 ATGCGTCTGGCGCTCCTTTTGCTGCTCTTGCCAGCCGCGTTGGCCTCAGAGGTCAATGATACCCTTCTATGGGGC CCATACAGACCCAATCTCTATTTTGGCCTCCGGCCACGCCTACCCCAATCATTAATGACGGGGCTCATGTGGTTC GGAACGCATGATTATACTTCTATCCAACATGCTCGTCATGCTTGCGAACAAAATGATAAACTGGACTCTTATACC TGGACAGAATTTGATACTCGGCAAGGCGGTGTCCAAGTGATCAAGGATAGCATAAACAATGTAAAGCTCACGACC GAGTTTCTAAAAGTCGCCGGAGGTGACCACGGCGGCAGCTGGGCTGCCCGTATCAAGGGCGAACCCATTGATCCC TTGAAACCATCTCAAATATCCACGTTGTTCTACTTTGGTCTTGAAGGACTAGGTGGTTTAGAAATGGAGACCGAA GAAGACGAAAACGGCATCGACGGACCTGTCAAGCTTAGTGGCTCTACTCCAGACCTGGATGAGTTCACACTCAGG ATTGTCGATGATGCCGACAACAAGGGTGTGACGTCGGGTCAACATGCAGAAGATTTTGAAGCTAGACACGGTAAA ACACATTTTGTCGGACGCCGATTGTCGTCTGGGGACATATGGCAAGCTAGAGAGCACCTCCTAAAGGACTTGGTC GAGCGTGCCCGAGAATTGGTCGGACCCTACAGGGAAGCAGAGAAAGGACTGCCTCACCCCTCTTGGCTCTTTCAA CTGCCGAATGACGTCTATACTGGGAGCAACCTATTCGCATTCCAGAAGTCCTTTGATGGGCCCTTCAAATTTGAT GTATTCTATGAGAGTGCAAGTGCCAAACAAAAATTGAGCTCTGCGACACTCGACCAAGGAATCCCTGCTCTTGCT GACGCTTATAGAGCAAGGTTCACAGATGTTTTCCCATATCCTAAAGACTTTCCTACTGAAGACAAAGACAAACTT GAAGGATTCTCTAGAGCAGTGACTTCTAACTTATTTGGCGGCGTCGGATATTTCTATGGTAATTCTGTCATTAAT AAGAAGTTTTCTTATGAGTGGGACGAAGAGGAAGACAATTCAGTCGAGGGTGATGAGGGCGAGACGGGCGCGAAG TTAACAGAACCCAAGGCTTTGTTGACTGCCACACCAAGTCGAAGTTTCTTCCCAAGAGGTTTCTACTGGGATGAG GGTTTCCACCTTCTCCATATTGGACAATGGGATAATGATTTCAGCTTGGAGATTCTGAAATCTTGGATTGGCCTG ATTGATGATAACGGTTGGGTTGCTCGTGAGCAAATTCTTGGCGATGAGGCGCGAAGCAAAGTTCCAGCAGAATTC CTGACTCAGGTTCCAAACTATGCCAATCCCCCCACATTAACAATGGCTGTCACCGCGTTTATCAAACGTCTCAAA GCTAAGAAAGAGGGCCCTTCGAACGAAGATTTGGGAATGGGCTTCGAGATGGGAACAGCTCAAAATGTTTTTACC GCCGACGGTTCGACTGTCGAGAGTCAATATTTGAATGATCCAGATCTCGCGCTTTCTTTCCTCAAATCGATCTAT AACCCTTTGAAAAGGCATTATGACTGGTTCAGACGTACTCAACGGGGCCAAATCAAACAGTATGGCAGAAAAGCT CGGTCGCGTACGGAAGCGTACAGGTGGCGTGGAAGATCGGAAATGCACGTACTCACCAGTGGTATGGATGATTAT CCGCGAGGGCCACCCCATGCGGGAGAGTTGCATTTGGACTTGATTTCTTGGATGGCATTCTTCACAAGAACGATG CGAGATATTGCAGAGTTCATTGAAGAGAAAGAAGACGCGATTACCTATATAGAGATCGAGAAGGCTATTCTGAAC AATATTGAAGATTTACACTGGAATGAAGAAGACCAAATGTACTGTGATGCCAATATAGATGATGATGACGAGTCA TACCATGTCTGCCACACGGGATACCTCTCTCTATTCCCATTCCTCCTAGAGTTACTTCCCCCCAATTCTCCTCAT TTAGGCGCTATCCTTGATGTTCTACGTGACCCTGAGCAACTGTGGTCCCAATATGGTCTGCGCAGTCTGTCGAAG TCGCACCCCGAATTCGGACAAGGTGAGAACTATTGGAAGGGCCCTATTTGGGTTCAAATGAACTACCTTGCTTTA CGGGCTTTGCACAATACCTACGCGGCTCAAGAGGGGCCATACCAGCAAAAAGCGAAGGAAATTTATGACGATTTA CGTAAAAATGTTGTGAATAATGTCGTGAAGGAGTATGAACGTACAGGATACGTTTGGGAGCAATACGATGCTGTT ACTGGAGAGGGTAAACGAAGTCATCCATTCACTGGTTGGACATCACTAACTTCACTGATTCTCGCGGAGAAGTAC TAA |
| Gene | >Agabi119p4|061530 ATGCGTCTGGCGCTCCTTTTGCTGCTCTTGCCAGCCGCGTTGGCCTCAGAGGTCAATGATACCCTTCTATGGGGC CCATACAGACCCAATCTCTATTTTGGCCTCCGGCCACGCCTACCCCAATCATTAATGACGGGGCTCATGTGGTTC GGAACGCATGATTATACTTCTATCCAACGTCGGTTGCTGTACAAATAAATGGGAGCTTTTCTTTTGCTGATACAA GCTTCCTTTTCCAGATGCTCGTCATGCTTGCGAACAAAATGATAAACTGGACTCTTATACCTGGACAGAATTTGA TACTCGGCAAGGCGGTGTCCAAGTGATCAAGGATAGCATAAACAATGTAAAGCTCACGACCGAGTTTCTAAAAGT CGCCGGAGGTGACCACGGCGGCAGCTGGGCTGCCCGTATCAAGGGCGAACCCATTGATCCCTGTTTGTCCAAGTC ACCGATTGCTTCAGTTATTGTGCTAATCGTCGTTTCAGTGAAACCATCTCAAATATCCACGTTGTTCTACTTTGG TCTTGAAGGACTAGGTGGTTTAGAAATGGAGACCGAAGAAGACGAAAACGTATGTCGCGCCGTAAATAGAAACAG CTGTTGCCTAACTATCGTTCCAAGGGCATCGACGGACCTGTCAAGCTTAGTGGCTCTACTCCAGACCTGGATGAG TTCACACTCAGGATTGTCGATGGTAGATTTCTTGGTACAGTACGGTAAAGATGATGCTAAGAGACGCTCGTTAAC AGATGCCGACAACAAGGGTGTGACGTCGGGTCAACATGCAGAAGATTTTGAAGCTAGACACGGTAAAACACATTT TGTCGGACGCCGATTGTCGTCTGGGGACATATGGCAAGCTAGAGGTGTGTCGCGTTTCTCTCTCTCTTCATCTCA TTGGTTGAGTGTATGTGAAGAGCACCTCCTAAAGGACTTGGTCGAGCGTGCCCGAGAATTGGTCGGACCCTACAG GGAAGCAGAGAAAGGACTGCCTCACCCCTCTTGGCTCTTTCAACTGCCGAATGACGTCTATACTGGGAGCAACCT ATTCGCATTCCAGAAGTCCTTTGATGGGCCCTTCAAATTTGATGTATTCTATGAGAGTGCAAGTGCCAAACAAAA ATTGAGCTGTAAGTTATTCTTGAAATTGAGCTGGGTCGGTGCTGAATCATCTCATAGCTGCGACACTCGACCAAG GAATCCCTGCTCTTGCTGACGCTTATAGAGCAAGGTTCACAGATGTTTTCCCATATCCTAAAGACTTTCCTACTG AAGACAAAGACAAACTTGAAGGATTCTCTAGAGCAGTGACTTCTAACTTATTTGGCGGCGTCGGATATTTCTATG GTAATTCTGTCATTAATAAGAAGTTTTCTTATGAGTGGGACGAAGAGGAAGACAATTCAGTCGAGGGTGATGAGG GCGAGACGGGCGCGAAGTTAACAGAACCCAAGGCTTTGTTGACTGCCACACCAAGTCGAAGTTTCTTCCCAAGAG GTTTCTACTGGTACGTATTTTTGTAATCCAAGCTCCATCAGAAGCCTTGAGCTAAACGCTATGCAGGGATGAGGG TTTCCACCTTCTCCATATTGGACAATGGGATAATGATTTCAGGCAGGTCCCTTTTCTTCACCCTGACATGAACCA TACCTTACCATCTTCCCTGACAGCTTGGAGATTCTGAAATCTTGGATTGGCCTGATTGATGATAACGGTTGGGTT GCTCGTGAGCAAATTCTTGGCGATGAGGCGCGAAGCAAAGTTCCAGCAGAATTCCTGACTCAGGTTCCAAACTAT GCCAATCCCCCCACATTAACAATGGCTGTCACCGCGTTTATCAAACGTCTCAAAGCTAAGAAAGAGGGCCCTTCG AACGAAGATTTGGGAATGGGCTTCGAGATGGGAACAGCTCAAAATGTTTTTACCGCCGACGGTTCGACTGTCGAG AGTCAATATTTGAATGATCCAGATCTCGCGCTTTCTTTCCTCAAATCGATCTATAACCCTTTGAAAAGGCATTAT GACTGGTTCAGACGTACTCAACGGGGCCAAATCAAACAGTATGGCAGAAAAGCTCGGTCGCGTACGGAAGCGTAC AGGTGGCGTGGAAGATCGGAAATGCACGTACTCACCAGTGGTATGGATGATTATCCGCGAGGGCCACCCCATGCG GGAGAGTTGCATTTGGACTTGATTTCTTGGATGGCATTCTTCACAAGAACGATGCGAGATATTGCAGAGTTCATT GAAGAGAAAGAAGACGCGATTACCTATATAGAGATCGAGAAGGCTATTCTGAACAATATTGAAGGTGAGTCAATG TGTACTTTCTAGTGCATATGAAGGTTGACGCTGTGCTTTTCAAGATTTACACTGGAATGAAGAAGACCAAATGTA CTGTGATGCCAATATAGATGATGATGGTAAGTTTAGATTATTACATTTGTGATTTTACTTATTCAAGTTTTTTTT CAGACGAGTCATACCATGTCTGCCACACGGGATACCTCTCTCTATTCCCATTCCTCCTAGAGTTACTTCCCCCCA ATTCTCCTCATTTAGGCGCTATCCTTGATGTTCTACGTGACCCTGAGCAACTGTGGTCCCAATATGGTCTGCGCA GTCTGTCGAAGTCGCACCCCGAATTCGGACAAGGTGAGAACTATTGGAAGGGCCCTATTTGGGTTCAAATGAACT ACCTTGCTTTACGGGCTTTGCACAATGTGAGTGTAGGATTATGGGTGAAATGGGGGTTTTGATGACTGAAGTTTG GTCATTTACTGTAGACCTACGCGGCTCAAGAGGGGCCATACCAGCAAAAAGCGAAGGAAATTTATGACGATTTAC GTAAAAATGTTGTGAATAATGTCGTGAAGGTTCGCTTTTCTGGATTGCAGGATTGTTTGGCATGTTTCTCATGAG CTTGTTTGCAGGAGTATGAACGTACAGGATACGTTTGGGAGCAATACGATGCTGTTACTGGAGAGGGTAAACGAA GGTAAGTCGGATGCGCTCAGGGTTGGTATTGAATACTGACGCTGGTGCAGTCATCCATTCACTGGTTGGACATCA CTAACTTCACTGAGTATGTTATTCCATGCCTTCTCGTGTTACAGAGTAAGATGCTGATGACGCGTATTTCGCGTA TTTCAGTTCTCGCGGAGAAGTACTAA |