Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|060860
Gene name
Locationscaffold_03b:112011..113131
Strand+
Gene length (bp)1120
Transcript length (bp)804
Coding sequence length (bp)804
Protein length (aa) 268

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01161 PBP Phosphatidylethanolamine-binding protein 3.4E-16 74 166

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|P31729|OV16_ONCVO OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2 30 201 1.0E-12
sp|P54185|OBA5_DROME Putative odorant-binding protein A5 OS=Drosophila melanogaster GN=a5 PE=2 SV=2 11 157 3.0E-12
sp|P54186|D1_ONCVO Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1 PE=2 SV=1 49 201 4.0E-10
sp|P54187|D2_ONCVO Protein D2 (Fragment) OS=Onchocerca volvulus GN=D2 PE=2 SV=1 91 201 5.0E-10
sp|P54188|D3_ONCVO Protein D3 (Fragment) OS=Onchocerca volvulus GN=D3 PE=2 SV=1 65 201 3.0E-08
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Swissprot ID Swissprot Description Start End E-value
sp|P31729|OV16_ONCVO OV-16 antigen OS=Onchocerca volvulus GN=OV16 PE=2 SV=2 30 201 1.0E-12
sp|P54185|OBA5_DROME Putative odorant-binding protein A5 OS=Drosophila melanogaster GN=a5 PE=2 SV=2 11 157 3.0E-12
sp|P54186|D1_ONCVO Protein D1 (Fragment) OS=Onchocerca volvulus GN=D1 PE=2 SV=1 49 201 4.0E-10
sp|P54187|D2_ONCVO Protein D2 (Fragment) OS=Onchocerca volvulus GN=D2 PE=2 SV=1 91 201 5.0E-10
sp|P54188|D3_ONCVO Protein D3 (Fragment) OS=Onchocerca volvulus GN=D3 PE=2 SV=1 65 201 3.0E-08
sp|Q06252|YL179_YEAST Uncharacterized protein YLR179C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YLR179C PE=1 SV=1 28 205 3.0E-08
sp|P14306|CPYI_YEAST Carboxypeptidase Y inhibitor OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=TFS1 PE=1 SV=2 20 159 8.0E-08
sp|P93003|TFL1_ARATH Protein TERMINAL FLOWER 1 OS=Arabidopsis thaliana GN=TFL1 PE=1 SV=1 24 157 7.0E-07
sp|Q96S96|PEBP4_HUMAN Phosphatidylethanolamine-binding protein 4 OS=Homo sapiens GN=PEBP4 PE=1 SV=3 90 157 7.0E-06
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
Yes 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|060860
MHSYLAIVSTFLALAAAQQNSDTNMGLAAIEAHFNQSHIVPDLLSAFQPQAVLGVNFGAGDIQPGQKFTIEEAGS
APTLTVNSSSPLNGSYVLAMIDADVPNSQLQKHNRHWLVGNVTVGQDSVVSNATATSYSRYFGPFPPSGSGPHRY
VIMLYAQPSDFNPPAEFATTDLPVEPMDWQAYVNDSHLGGLVAANYIQVEQGTASASIFSTAPVVSSTLVAASTT
AGSATTSSTQTGSSNESNGAKVLDFHVPAVMCLATLATLLLA*
Coding >Agabi119p4|060860
ATGCATTCTTACCTTGCCATCGTTTCAACGTTCCTGGCTCTCGCCGCCGCTCAACAAAACAGCGACACAAATATG
GGCCTCGCCGCTATTGAGGCTCACTTCAACCAGTCGCATATTGTCCCTGATTTGTTGTCTGCCTTCCAGCCTCAA
GCTGTCCTCGGAGTGAACTTTGGTGCGGGTGACATTCAGCCGGGCCAGAAGTTTACCATAGAAGAGGCTGGCTCT
GCACCCACTTTGACTGTCAACAGTTCCTCTCCCTTGAACGGGTCGTACGTATTGGCCATGATAGACGCTGACGTG
CCCAACTCGCAACTACAAAAACACAACCGTCACTGGCTGGTTGGCAATGTCACAGTTGGCCAAGACTCGGTGGTT
AGCAACGCGACAGCTACAAGCTACTCTCGCTACTTTGGCCCGTTCCCGCCATCAGGTTCAGGTCCTCACCGTTAT
GTCATAATGTTATATGCACAACCTTCCGATTTCAACCCTCCTGCTGAGTTTGCAACGACCGACTTGCCTGTGGAA
CCAATGGACTGGCAAGCATATGTCAACGACTCGCACCTTGGAGGTCTTGTGGCTGCTAATTATATTCAGGTTGAA
CAAGGTACTGCTAGCGCATCAATCTTCTCCACTGCACCTGTCGTCTCTTCCACTTTGGTTGCCGCTTCGACTACT
GCTGGCTCTGCCACTACTTCTTCTACTCAAACTGGCTCGAGCAATGAGTCCAATGGAGCCAAGGTCCTGGATTTC
CACGTCCCGGCTGTCATGTGCTTAGCCACTCTTGCTACCTTACTTCTCGCATAA
Transcript >Agabi119p4|060860
ATGCATTCTTACCTTGCCATCGTTTCAACGTTCCTGGCTCTCGCCGCCGCTCAACAAAACAGCGACACAAATATG
GGCCTCGCCGCTATTGAGGCTCACTTCAACCAGTCGCATATTGTCCCTGATTTGTTGTCTGCCTTCCAGCCTCAA
GCTGTCCTCGGAGTGAACTTTGGTGCGGGTGACATTCAGCCGGGCCAGAAGTTTACCATAGAAGAGGCTGGCTCT
GCACCCACTTTGACTGTCAACAGTTCCTCTCCCTTGAACGGGTCGTACGTATTGGCCATGATAGACGCTGACGTG
CCCAACTCGCAACTACAAAAACACAACCGTCACTGGCTGGTTGGCAATGTCACAGTTGGCCAAGACTCGGTGGTT
AGCAACGCGACAGCTACAAGCTACTCTCGCTACTTTGGCCCGTTCCCGCCATCAGGTTCAGGTCCTCACCGTTAT
GTCATAATGTTATATGCACAACCTTCCGATTTCAACCCTCCTGCTGAGTTTGCAACGACCGACTTGCCTGTGGAA
CCAATGGACTGGCAAGCATATGTCAACGACTCGCACCTTGGAGGTCTTGTGGCTGCTAATTATATTCAGGTTGAA
CAAGGTACTGCTAGCGCATCAATCTTCTCCACTGCACCTGTCGTCTCTTCCACTTTGGTTGCCGCTTCGACTACT
GCTGGCTCTGCCACTACTTCTTCTACTCAAACTGGCTCGAGCAATGAGTCCAATGGAGCCAAGGTCCTGGATTTC
CACGTCCCGGCTGTCATGTGCTTAGCCACTCTTGCTACCTTACTTCTCGCATAA
Gene >Agabi119p4|060860
ATGCATTCTTACCTTGCCATCGTTTCAACGTTCCTGGCTCTCGCCGCCGCTCAACAAAACAGCGACACAAATATG
GGCCTCGCCGCTATTGAGGCTCACTTCAACCAGTCGCATATTGTCCCTGATTTGTTGTCTGCCTTCCAGCCTCAA
GCTGTCCTCGGAGTGAACTTTGGTGAGTTCCAGTGGTTTGAAGTGGAAATGCCTAGCTCAAACCTTGTTAAAGGT
GCGGGTGACATTCAGCCGGGCCAGAAGTTTACCATAGAAGGTGTGTTTCCCTTTCGCCCGTGTTCGTCGCAGCGT
GTTCACTGTGTTGCTCTGTAGAGGCTGGCTCTGCACCCACTTTGACTGTCAACAGTTCCTCTCCCTTGAACGGGT
CGTACGTATTGGCCATGATAGACGCTGACGTGCCCAACTCGCAACTACAAAAACACAACCGTCACTGGCTGGTTG
GCAATGTCACAGTTGGCCAAGGTCAGTCGAAAAGCAAATGCCCTACTCACTTAAGTTTTTGCTCACATATCACAG
ACTCGGTGGTTAGCAACGCGACAGCTACAAGCTACTCTCGCTACTTTGGCCCGTTCCCGCCATCAGGTTCAGGTC
CTCACCGGTCAGCGTGGTTGCCAGCTTGGGGGTTCAGGAATGCTAACGGCTCACCAACAGTTATGTCATAATGTT
ATATGCACAACCTTCCGATTTCAACCCTCCTGCTGAGTTTGCAACGACCGACTTGCCTGTGGAACCAATGGACTG
GCAAGCATATGTCAACGTAAGGCCATCTTAACATCATATATCTCCTGAATCTCATATTTTGTGCAGGACTCGCAC
CTTGGAGGTCTTGTGGCTGTAAGTAAGATATATCTCGAGTCTCGGCCACTTCACTGATTTTGCTCGACAGGCTAA
TTATATTCAGGTTGAACAAGGTACTGCTAGCGCATCAATCTTCTCCACTGCACCTGTCGTCTCTTCCACTTTGGT
TGCCGCTTCGACTACTGCTGGCTCTGCCACTACTTCTTCTACTCAAACTGGCTCGAGCAATGAGTCCAATGGAGC
CAAGGTCCTGGATTTCCACGTCCCGGCTGTCATGTGCTTAGCCACTCTTGCTACCTTACTTCTCGCATAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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