Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|059780
Gene name
Locationscaffold_03a:1754122..1755522
Strand-
Gene length (bp)1400
Transcript length (bp)1239
Coding sequence length (bp)1239
Protein length (aa) 413

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF10436 BCDHK_Adom3 Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase 3.3E-39 34 191
PF02518 HATPase_c Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 2.7E-06 235 322

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|Q2KJG8|BCKD_BOVIN [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Bos taurus GN=BCKDK PE=2 SV=1 37 405 4.0E-59
sp|O14874|BCKD_HUMAN [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Homo sapiens GN=BCKDK PE=1 SV=2 37 405 7.0E-59
sp|Q00972|BCKD_RAT [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Rattus norvegicus GN=Bckdk PE=1 SV=2 37 405 3.0E-58
sp|O55028|BCKD_MOUSE [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Mus musculus GN=Bckdk PE=1 SV=1 37 405 1.0E-57
sp|Q9SBJ1|PDK_ARATH [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Arabidopsis thaliana GN=PDK PE=1 SV=1 7 407 9.0E-51
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Swissprot ID Swissprot Description Start End E-value
sp|Q2KJG8|BCKD_BOVIN [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Bos taurus GN=BCKDK PE=2 SV=1 37 405 4.0E-59
sp|O14874|BCKD_HUMAN [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Homo sapiens GN=BCKDK PE=1 SV=2 37 405 7.0E-59
sp|Q00972|BCKD_RAT [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Rattus norvegicus GN=Bckdk PE=1 SV=2 37 405 3.0E-58
sp|O55028|BCKD_MOUSE [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial OS=Mus musculus GN=Bckdk PE=1 SV=1 37 405 1.0E-57
sp|Q9SBJ1|PDK_ARATH [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Arabidopsis thaliana GN=PDK PE=1 SV=1 7 407 9.0E-51
sp|Q922H2|PDK3_MOUSE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial OS=Mus musculus GN=Pdk3 PE=1 SV=1 19 404 4.0E-44
sp|Q15120|PDK3_HUMAN [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 3, mitochondrial OS=Homo sapiens GN=PDK3 PE=1 SV=1 19 404 8.0E-44
sp|Q64536|PDK2_RAT [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial OS=Rattus norvegicus GN=Pdk2 PE=1 SV=1 21 404 7.0E-42
sp|Q9JK42|PDK2_MOUSE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial OS=Mus musculus GN=Pdk2 PE=1 SV=2 21 404 4.0E-41
sp|Q15119|PDK2_HUMAN [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 2, mitochondrial OS=Homo sapiens GN=PDK2 PE=1 SV=2 21 404 6.0E-41
sp|P40530|PDK1_YEAST [Pyruvate dehydrogenase (acetyl-transferring)] kinase 1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PKP1 PE=1 SV=1 33 402 8.0E-40
sp|O54937|PDK4_RAT [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Rattus norvegicus GN=Pdk4 PE=1 SV=1 16 404 2.0E-39
sp|O70571|PDK4_MOUSE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Mus musculus GN=Pdk4 PE=1 SV=1 16 404 3.0E-39
sp|O88345|PDK4_ICTTR [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Ictidomys tridecemlineatus GN=PDK4 PE=2 SV=1 16 404 1.0E-38
sp|Q16654|PDK4_HUMAN [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Homo sapiens GN=PDK4 PE=1 SV=1 16 404 2.0E-37
sp|Q1KMR4|PDK4_RHIFE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 4, mitochondrial OS=Rhinolophus ferrumequinum GN=PDK4 PE=2 SV=1 16 404 2.0E-36
sp|Q63065|PDK1_RAT [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Rattus norvegicus GN=Pdk1 PE=1 SV=1 26 404 4.0E-36
sp|Q8BFP9|PDK1_MOUSE [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Mus musculus GN=Pdk1 PE=1 SV=2 31 404 5.0E-36
sp|P91622|PDK_DROME [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Drosophila melanogaster GN=Pdk PE=2 SV=2 21 409 3.0E-35
sp|Q15118|PDK1_HUMAN [Pyruvate dehydrogenase (acetyl-transferring)] kinase isozyme 1, mitochondrial OS=Homo sapiens GN=PDK1 PE=1 SV=1 31 404 2.0E-34
sp|O02623|PDK_ASCSU [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Ascaris suum PE=2 SV=1 12 404 4.0E-34
sp|Q9P6P9|PDK_SCHPO [Pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=pkp1 PE=3 SV=1 112 409 2.0E-32
sp|Q02332|PDHK2_CAEEL Probable [pyruvate dehydrogenase (acetyl-transferring)] kinase, mitochondrial OS=Caenorhabditis elegans GN=pdhk-2 PE=3 SV=1 12 404 3.0E-31
sp|P53170|PDK2_YEAST [Pyruvate dehydrogenase (acetyl-transferring)] kinase 2, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PKP2 PE=1 SV=3 22 401 6.0E-25
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 49 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|059780
MATLKRAIHTQISPYPAEVSELLSRYNDVIPRPFNLSQLLSFGRPVTSDSILASVSYALAELPRRLATRVRALET
LPYIVDTNPYIAKTLHAHRQSFAWLATHAPVTSSSQNEEFVEKLASIVEDHTDDIPTMAKGFQECSRYMSPTQIS
NFLDGAIHNRIAVRLIAEQHITLSKALSNSPMKADYVGVVDPQCSPYQMIRMCGSFVSELCEGTLGAAPEIIVEG
DLDAVFPYVPVHLEYILTELLKNAFRATVENHYKKSHGITKRPPPLCITLCSPTPLSRNHEHYFSIRIRDQGGGV
SPSNMARIFSYAFTTAGRGVHQSVQAHEGGPSAGTGSSDIMGEDDSSLFGEITGKGLQNGLGTIAGLGYGLPMSR
LYARYFGGSLDIFALEGWGSDVFLKLRCLDEAGDAAI*
Coding >Agabi119p4|059780
ATGGCCACGCTGAAGCGTGCAATTCACACGCAAATATCGCCATATCCCGCTGAGGTTTCTGAGCTTTTATCCAGA
TACAACGACGTCATCCCCCGCCCATTTAACCTGTCCCAGCTCCTTTCATTCGGGAGGCCCGTTACATCCGATTCG
ATCCTTGCCTCTGTTTCTTATGCTCTTGCTGAGCTGCCAAGGCGACTTGCGACACGTGTTCGCGCCCTCGAGACT
CTTCCATATATCGTCGACACAAATCCTTACATTGCAAAAACCCTCCATGCACACCGACAGAGCTTCGCGTGGCTA
GCCACGCATGCCCCTGTTACTAGTTCATCTCAAAATGAAGAGTTTGTTGAGAAACTTGCGAGCATTGTGGAAGAT
CATACGGATGATATTCCAACCATGGCTAAAGGTTTCCAGGAATGCTCGCGTTACATGTCACCAACACAGATAAGC
AACTTTCTTGACGGTGCCATCCATAACCGTATCGCTGTCCGCCTGATCGCTGAACAGCACATTACCCTATCCAAG
GCATTGTCAAATTCACCGATGAAGGCCGACTATGTCGGCGTTGTTGATCCCCAATGTTCGCCATATCAAATGATA
CGCATGTGTGGTTCTTTTGTCTCGGAGCTGTGCGAGGGAACGCTTGGTGCGGCGCCGGAAATTATAGTTGAAGGG
GATTTAGATGCAGTTTTCCCCTATGTCCCTGTCCACCTGGAGTATATATTAACGGAACTATTAAAAAATGCGTTC
CGAGCGACGGTTGAGAATCATTACAAGAAAAGTCATGGCATCACTAAACGTCCTCCACCTCTTTGCATCACACTC
TGTTCTCCGACGCCTCTGAGTCGAAATCATGAACATTACTTTTCGATTCGTATCCGCGACCAAGGGGGAGGAGTA
TCGCCCAGCAATATGGCTCGAATCTTTTCTTATGCCTTTACTACGGCAGGGCGCGGTGTTCATCAAAGTGTGCAG
GCTCATGAAGGCGGTCCTTCTGCTGGCACAGGTAGCAGTGATATTATGGGAGAAGACGATTCTAGCCTGTTCGGT
GAAATCACTGGTAAAGGACTACAAAACGGGCTTGGCACAATTGCTGGGTTGGGTTATGGTCTCCCAATGAGTCGG
CTATATGCAAGGTACTTTGGCGGCTCTCTGGATATTTTCGCATTGGAAGGATGGGGCAGTGATGTGTTCCTTAAA
CTACGCTGTCTAGACGAGGCGGGGGATGCTGCAATTTAG
Transcript >Agabi119p4|059780
ATGGCCACGCTGAAGCGTGCAATTCACACGCAAATATCGCCATATCCCGCTGAGGTTTCTGAGCTTTTATCCAGA
TACAACGACGTCATCCCCCGCCCATTTAACCTGTCCCAGCTCCTTTCATTCGGGAGGCCCGTTACATCCGATTCG
ATCCTTGCCTCTGTTTCTTATGCTCTTGCTGAGCTGCCAAGGCGACTTGCGACACGTGTTCGCGCCCTCGAGACT
CTTCCATATATCGTCGACACAAATCCTTACATTGCAAAAACCCTCCATGCACACCGACAGAGCTTCGCGTGGCTA
GCCACGCATGCCCCTGTTACTAGTTCATCTCAAAATGAAGAGTTTGTTGAGAAACTTGCGAGCATTGTGGAAGAT
CATACGGATGATATTCCAACCATGGCTAAAGGTTTCCAGGAATGCTCGCGTTACATGTCACCAACACAGATAAGC
AACTTTCTTGACGGTGCCATCCATAACCGTATCGCTGTCCGCCTGATCGCTGAACAGCACATTACCCTATCCAAG
GCATTGTCAAATTCACCGATGAAGGCCGACTATGTCGGCGTTGTTGATCCCCAATGTTCGCCATATCAAATGATA
CGCATGTGTGGTTCTTTTGTCTCGGAGCTGTGCGAGGGAACGCTTGGTGCGGCGCCGGAAATTATAGTTGAAGGG
GATTTAGATGCAGTTTTCCCCTATGTCCCTGTCCACCTGGAGTATATATTAACGGAACTATTAAAAAATGCGTTC
CGAGCGACGGTTGAGAATCATTACAAGAAAAGTCATGGCATCACTAAACGTCCTCCACCTCTTTGCATCACACTC
TGTTCTCCGACGCCTCTGAGTCGAAATCATGAACATTACTTTTCGATTCGTATCCGCGACCAAGGGGGAGGAGTA
TCGCCCAGCAATATGGCTCGAATCTTTTCTTATGCCTTTACTACGGCAGGGCGCGGTGTTCATCAAAGTGTGCAG
GCTCATGAAGGCGGTCCTTCTGCTGGCACAGGTAGCAGTGATATTATGGGAGAAGACGATTCTAGCCTGTTCGGT
GAAATCACTGGTAAAGGACTACAAAACGGGCTTGGCACAATTGCTGGGTTGGGTTATGGTCTCCCAATGAGTCGG
CTATATGCAAGGTACTTTGGCGGCTCTCTGGATATTTTCGCATTGGAAGGATGGGGCAGTGATGTGTTCCTTAAA
CTACGCTGTCTAGACGAGGCGGGGGATGCTGCAATTTAG
Gene >Agabi119p4|059780
ATGGCCACGCTGAAGCGTGCAATTCACACGCAAATATCGCCATATCCCGCTGAGGTTTCTGAGCTTTTATCCAGA
TACAACGACGTCATCCCCCGCCCATTTAACCTGTCCCAGCTCCTTTCATTCGGGAGGCCCGTTACATCCGATTCG
ATCCTTGCCTCTGTTTCTTATGCTCTTGCTGAGCTGCCAAGGCGACTTGCGACACGTGTTCGCGCCCTCGAGACT
CTTCCATATATCGTCGACACAAATCCTTACATTGCAAAAACCCTCCATGCACACCGACAGAGCTTCGCGTGGCTA
GCCACGCATGCCCCTGTTACTAGTTCATCTCAAAATGAAGAGTTTGTTGAGAAACTTGCGAGCATTGTGGAAGAT
CATACGGATGATATTCCAACCATGGCTAAAGGGTGTGTATCTCTGAATGATTCTTTTCTCAACCCCGAGATTCAA
GTACTGGGCTATGATACAAGTTTCCAGGAATGCTCGCGTTACATGTCACCAACACAGATAAGCAACTTTCTTGAC
GGTGCCATCCATAACCGTATCGCTGTCCGCCTGATCGCTGAACAGCACATTACCCTATCCAAGGCATTGTCAAAT
TCACCGATGAAGGCCGACTATGTCGGCGTTGTTGATCCCCAATGTTCGCCATATCAAATGATACGCATGTGTGGT
TCTTTTGTCTCGGAGCTGTGCGAGGGAACGCTTGGTGCGGCGCCGGAAATTATAGTTGAAGGGGATTTAGATGCA
GTTTTCCCGTGAGTCTTATATGTCGTTGCATCAATTCGGCCACTCGAAGTGCTGCATAGCTATGTCCCTGTCCAC
CTGGAGTATATATTAACGGAACTATTAAAAAATGCGTTCCGAGCGACGGTTGAGAATCATTACAAGAAAAGTCAT
GGCATCACTAAACGTCCTCCACCTCTTTGCATCACACTCTGTTCTCCGACGCCTCTGAGTCGAAATCATGAACAT
TACTTTTCGATTCGTATCCGCGACCAAGGGGGAGGAGTATCGCCCAGCAATATGGCTCGAATCTTTTCTTATGCC
TTTACTACGGCAGGGCGCGGTGTTCATCAAAGTGTGCAGGCTCATGAAGGCGGTCCTTCTGCTGGCACAGGTAGC
AGTGATATTATGGGAGAAGACGATTCTAGCCTGTTCGGTGAAATCACTGGTAAAGGACTACAAAACGGGCTTGGC
ACAATTGCTGGGTTGGGTTATGGTCTCCCAATGAGTCGGCTATATGCAAGGTGTGTCTTCGTTTTATATTTCTCT
AACCGCTGATCAACATTGTCAGGTACTTTGGCGGCTCTCTGGATATTTTCGCATTGGAAGGATGGGGCAGTGATG
TGTTCCTTAAACTACGCTGTCTAGACGAGGCGGGGGATGCTGCAATTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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