Protein ID | Agabi119p4|058560 |
Gene name | |
Location | scaffold_03a:1472834..1476484 |
Strand | + |
Gene length (bp) | 3650 |
Transcript length (bp) | 2424 |
Coding sequence length (bp) | 2424 |
Protein length (aa) | 808 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF12708 | Pectate_lyase_3 | Pectate lyase superfamily protein | 4.3E-86 | 94 | 321 |
PF12708 | Pectate_lyase_3 | Pectate lyase superfamily protein | 3.5E-15 | 450 | 519 |
Swissprot ID | Swissprot Description | Start | End | E-value |
---|---|---|---|---|
sp|P49426|EXG1_COCCA | Glucan 1,3-beta-glucosidase OS=Cochliobolus carbonum GN=EXG1 PE=1 SV=1 | 69 | 802 | 0.0E+00 |
sp|D4B0V1|E13B_ARTBC | Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02077 PE=1 SV=1 | 414 | 802 | 9.0E-107 |
sp|D4B0V1|E13B_ARTBC | Probable glucan endo-1,3-beta-glucosidase ARB_02077 OS=Arthroderma benhamiae (strain ATCC MYA-4681 / CBS 112371) GN=ARB_02077 PE=1 SV=1 | 71 | 405 | 6.0E-101 |
sp|P53626|E13B_TRIHA | Glucan endo-1,3-beta-glucosidase BGN13.1 OS=Trichoderma harzianum GN=bgn13.1 PE=1 SV=1 | 136 | 790 | 9.0E-59 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 52 | 0.5 |
Domain # | Start | End | Length |
---|---|---|---|
1 | 34 | 53 | 19 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Agabi119p4|058560 MELRDEKMTRYKAPEGDRVILDSNLSGFHMLPKFLSTFVAFFLSLVISVHALGTSCSAPLGPGTAAPGDPFWLER IRHQGISAFNPNPSGYQVFRNVKDFGARGDGVTDDTAAINAAISAGNRCGGGGCGSSTITPAVVYFPKGTYLVSA PIIAYYYSQLIGDAKSPPTLLAAASFDGMAVIDADPYIPGGGGAQWYINQNNFFRSVRNFVIDVRRVPAEKSQGT GLHWQVSQATSLFNIVVHMSTAPNTAHQGIFMENGSGGFMSDLVFNGGKFGIWVGNQQFTVRNITVNNAQTGIFA IWNWGWTFQGVTINNCGVGFDLTTGATSPSSQTTGAEAIIDATINDTPIFIRNSEPSNGRLAGSLVINNARLNNV PVAVGVAGGGVVLAGGSKTIASWGQGNVFSGTNPNGRFVQDNIVNAHKPSVLLDGNGKIFGKPHPQYANYAVSQF VSVKDHGARGDGRTDDTAALKSIFDQFAGCKIIFFDAGTYIVSSTLTIPAGTQIVGEGWSTIAGKGSAFRDMNNP QVVVRVGASGSQGVVEITDMLFTTIGPAAGAIVVEWNVRQPDGQNGGAGMWDTHIRLGGVAGSNLQTSQCPSSGS GGTTNCFAAFLALHLTSRSTAYLEGTWVWLADHDLDGPSQLNLYSGRGILSESAGPVWLIATGSEHHVLYQYSLV GAKNHYMGLIQTESPYFQPNPSPPAPFSIVPSFSDPSFNGVRSSWALTVSGSTDIIVFGAGLYSFFSNYNQDCIT PATCQSQILNVDSSSSLTVYSLSTVATTFQLSVNQAGIVNQAGNVNGFQSTMTAWSR* |
Coding | >Agabi119p4|058560 ATGGAACTCAGAGACGAAAAAATGACGCGATACAAAGCCCCTGAAGGAGACAGAGTGATCCTCGACAGCAACTTG TCCGGGTTCCATATGCTACCAAAATTTCTGTCCACTTTCGTCGCTTTTTTCCTCTCCTTGGTCATCTCTGTTCAT GCTTTGGGAACATCTTGTAGTGCACCTTTAGGACCCGGAACTGCCGCTCCGGGGGATCCATTTTGGCTTGAACGA ATCAGGCACCAGGGAATTTCGGCTTTCAATCCTAACCCTTCCGGTTACCAAGTTTTCAGGAATGTCAAGGATTTC GGTGCGAGAGGCGACGGTGTTACTGACGATACAGCAGCGATCAATGCAGCGATTTCAGCAGGGAACCGCTGTGGC GGTGGCGGTTGTGGATCTTCGACGATCACGCCTGCTGTCGTCTATTTCCCCAAAGGAACCTACCTAGTTTCAGCC CCGATCATCGCCTATTATTACTCGCAGCTGATCGGTGATGCTAAATCCCCGCCAACTTTGCTTGCCGCTGCTTCA TTCGACGGGATGGCTGTCATTGATGCGGATCCATACATCCCGGGTGGCGGTGGTGCCCAGTGGTATATTAATCAG AACAACTTCTTCCGGTCCGTACGGAATTTCGTGATCGATGTTCGAAGAGTTCCTGCGGAGAAGTCACAAGGAACT GGTCTGCATTGGCAAGTTTCGCAGGCTACTTCTTTGTTCAATATTGTTGTCCATATGTCCACTGCTCCCAACACG GCACACCAAGGTATCTTTATGGAAAATGGAAGTGGTGGGTTCATGAGTGACTTGGTGTTTAATGGAGGAAAGTTC GGTATCTGGGTTGGAAATCAACAATTTACTGTCCGCAATATCACCGTCAACAATGCTCAAACGGGTATTTTTGCC ATCTGGAATTGGGGTTGGACTTTCCAGGGCGTCACCATCAATAACTGTGGTGTCGGTTTCGACCTTACGACAGGC GCAACGTCGCCCTCTTCGCAAACAACTGGAGCTGAAGCTATCATTGACGCTACCATCAACGATACTCCTATTTTC ATCAGAAACTCAGAGCCCAGTAACGGTCGACTAGCTGGATCACTCGTGATCAATAATGCTAGACTCAATAATGTT CCGGTTGCCGTTGGGGTTGCTGGCGGCGGCGTTGTGTTGGCTGGTGGTTCGAAAACGATAGCCAGCTGGGGCCAG GGTAACGTCTTCTCTGGCACCAACCCTAATGGAAGATTCGTACAAGACAACATTGTGAACGCCCACAAGCCTTCT GTCCTTTTGGACGGGAATGGAAAGATCTTTGGAAAGCCACATCCTCAATATGCCAATTATGCTGTCAGTCAATTC GTGAGTGTCAAAGACCATGGCGCTCGAGGTGATGGTCGAACGGACGATACCGCTGCACTCAAGTCGATATTTGAC CAGTTTGCTGGCTGCAAGATTATCTTTTTCGATGCCGGAACCTATATCGTCTCTTCCACCCTGACCATTCCTGCT GGAACTCAGATTGTTGGTGAAGGCTGGTCGACTATTGCTGGGAAGGGATCTGCCTTCCGGGATATGAACAATCCT CAAGTGGTCGTCAGAGTTGGCGCATCCGGGTCGCAGGGAGTGGTCGAGATTACTGACATGCTATTTACAACAATT GGCCCTGCCGCTGGTGCGATCGTTGTTGAATGGAATGTCAGACAACCTGATGGACAAAATGGTGGTGCTGGCATG TGGGACACTCATATCAGGCTAGGCGGAGTGGCTGGATCCAACTTGCAAACCAGTCAATGTCCCAGTTCCGGAAGC GGTGGAACGACTAATTGCTTTGCTGCTTTCCTTGCACTACACCTTACATCTCGGTCCACTGCTTACTTGGAGGGT ACCTGGGTCTGGTTGGCTGACCATGATCTTGATGGCCCTTCTCAACTCAATCTGTATTCCGGAAGAGGCATCCTT TCCGAATCCGCTGGTCCTGTCTGGTTGATTGCTACAGGCTCTGAACACCATGTCTTATACCAATACTCTTTGGTC GGCGCGAAGAATCACTACATGGGTCTCATTCAGACTGAAAGCCCGTATTTCCAACCTAACCCCAGTCCTCCTGCT CCATTCTCCATTGTACCCTCGTTCAGTGATCCGAGCTTCAATGGTGTCCGATCATCTTGGGCACTAACGGTGTCT GGTTCTACCGATATCATAGTCTTCGGCGCGGGACTTTACAGCTTCTTCTCGAACTACAATCAAGATTGCATTACC CCTGCTACGTGCCAAAGTCAAATCTTGAACGTCGATTCGTCATCATCGCTCACGGTGTACAGTTTGTCCACTGTG GCGACTACGTTCCAGCTTAGCGTCAACCAAGCCGGGATTGTCAACCAAGCAGGAAATGTGAATGGTTTCCAATCT ACTATGACTGCTTGGAGTCGATGA |
Transcript | >Agabi119p4|058560 ATGGAACTCAGAGACGAAAAAATGACGCGATACAAAGCCCCTGAAGGAGACAGAGTGATCCTCGACAGCAACTTG TCCGGGTTCCATATGCTACCAAAATTTCTGTCCACTTTCGTCGCTTTTTTCCTCTCCTTGGTCATCTCTGTTCAT GCTTTGGGAACATCTTGTAGTGCACCTTTAGGACCCGGAACTGCCGCTCCGGGGGATCCATTTTGGCTTGAACGA ATCAGGCACCAGGGAATTTCGGCTTTCAATCCTAACCCTTCCGGTTACCAAGTTTTCAGGAATGTCAAGGATTTC GGTGCGAGAGGCGACGGTGTTACTGACGATACAGCAGCGATCAATGCAGCGATTTCAGCAGGGAACCGCTGTGGC GGTGGCGGTTGTGGATCTTCGACGATCACGCCTGCTGTCGTCTATTTCCCCAAAGGAACCTACCTAGTTTCAGCC CCGATCATCGCCTATTATTACTCGCAGCTGATCGGTGATGCTAAATCCCCGCCAACTTTGCTTGCCGCTGCTTCA TTCGACGGGATGGCTGTCATTGATGCGGATCCATACATCCCGGGTGGCGGTGGTGCCCAGTGGTATATTAATCAG AACAACTTCTTCCGGTCCGTACGGAATTTCGTGATCGATGTTCGAAGAGTTCCTGCGGAGAAGTCACAAGGAACT GGTCTGCATTGGCAAGTTTCGCAGGCTACTTCTTTGTTCAATATTGTTGTCCATATGTCCACTGCTCCCAACACG GCACACCAAGGTATCTTTATGGAAAATGGAAGTGGTGGGTTCATGAGTGACTTGGTGTTTAATGGAGGAAAGTTC GGTATCTGGGTTGGAAATCAACAATTTACTGTCCGCAATATCACCGTCAACAATGCTCAAACGGGTATTTTTGCC ATCTGGAATTGGGGTTGGACTTTCCAGGGCGTCACCATCAATAACTGTGGTGTCGGTTTCGACCTTACGACAGGC GCAACGTCGCCCTCTTCGCAAACAACTGGAGCTGAAGCTATCATTGACGCTACCATCAACGATACTCCTATTTTC ATCAGAAACTCAGAGCCCAGTAACGGTCGACTAGCTGGATCACTCGTGATCAATAATGCTAGACTCAATAATGTT CCGGTTGCCGTTGGGGTTGCTGGCGGCGGCGTTGTGTTGGCTGGTGGTTCGAAAACGATAGCCAGCTGGGGCCAG GGTAACGTCTTCTCTGGCACCAACCCTAATGGAAGATTCGTACAAGACAACATTGTGAACGCCCACAAGCCTTCT GTCCTTTTGGACGGGAATGGAAAGATCTTTGGAAAGCCACATCCTCAATATGCCAATTATGCTGTCAGTCAATTC GTGAGTGTCAAAGACCATGGCGCTCGAGGTGATGGTCGAACGGACGATACCGCTGCACTCAAGTCGATATTTGAC CAGTTTGCTGGCTGCAAGATTATCTTTTTCGATGCCGGAACCTATATCGTCTCTTCCACCCTGACCATTCCTGCT GGAACTCAGATTGTTGGTGAAGGCTGGTCGACTATTGCTGGGAAGGGATCTGCCTTCCGGGATATGAACAATCCT CAAGTGGTCGTCAGAGTTGGCGCATCCGGGTCGCAGGGAGTGGTCGAGATTACTGACATGCTATTTACAACAATT GGCCCTGCCGCTGGTGCGATCGTTGTTGAATGGAATGTCAGACAACCTGATGGACAAAATGGTGGTGCTGGCATG TGGGACACTCATATCAGGCTAGGCGGAGTGGCTGGATCCAACTTGCAAACCAGTCAATGTCCCAGTTCCGGAAGC GGTGGAACGACTAATTGCTTTGCTGCTTTCCTTGCACTACACCTTACATCTCGGTCCACTGCTTACTTGGAGGGT ACCTGGGTCTGGTTGGCTGACCATGATCTTGATGGCCCTTCTCAACTCAATCTGTATTCCGGAAGAGGCATCCTT TCCGAATCCGCTGGTCCTGTCTGGTTGATTGCTACAGGCTCTGAACACCATGTCTTATACCAATACTCTTTGGTC GGCGCGAAGAATCACTACATGGGTCTCATTCAGACTGAAAGCCCGTATTTCCAACCTAACCCCAGTCCTCCTGCT CCATTCTCCATTGTACCCTCGTTCAGTGATCCGAGCTTCAATGGTGTCCGATCATCTTGGGCACTAACGGTGTCT GGTTCTACCGATATCATAGTCTTCGGCGCGGGACTTTACAGCTTCTTCTCGAACTACAATCAAGATTGCATTACC CCTGCTACGTGCCAAAGTCAAATCTTGAACGTCGATTCGTCATCATCGCTCACGGTGTACAGTTTGTCCACTGTG GCGACTACGTTCCAGCTTAGCGTCAACCAAGCCGGGATTGTCAACCAAGCAGGAAATGTGAATGGTTTCCAATCT ACTATGACTGCTTGGAGTCGATGA |
Gene | >Agabi119p4|058560 ATGGAACTCAGAGACGAAAAAATGACGCGATACAAAGCCCCTGAAGGAGACAGAGTGATCCTCGACAGGTACTTA TAGTTGGAGTCAGTGTAGCGCACCTAAGCAAGCGCTCCTCGTTACTCGCTTCAGCTCTACGTTAGCAACTTGTCC GGGTTCCATATGCTACCAAAATTTCTGTCCACTTTCGTCGCTTTTTTCCTCTCCTTGGTCATCTCTGTTCATGCT TTGGGAACATCTTGTAGTGCACCTTTAGGACCCGGAACTGCCGCTCCGGGGGATCCATTTTGGCTTGAACGAATC AGGCACCAGGGAATTTCGGCTTTCAATCCTAACCCTTCCGGTTACCAAGTTTTCAGGAATGTCAAGGTTCGTACT CGCAAGGATACCAGTCCTAGTCAGTCATTGATGAGCGTGTCAGGATTTCGGTGCGAGAGGCGACGGTGTTACTGA CGATACAGCAGCGATCAAGTAAATTTCTCGCTATTTGCCATATGCTTCGTGGCTGAAATTTTCACCAGTGCAGCG ATTTCAGCAGGGAACCGCTGTGGCGGTGGCGGTTGTGGATCTTCGACGTATGTACATCTCATGAACTTGAAGTCG TTCAGCACTTACAATTTGAGGTTTAGGATCACGCCTGCTGTCGTCTATTTCCCCAAAGGGTAAGCATACCTCTTA TGAGCAATTTATGGAAGCAATCGTTGAAATCGTTGAATCGATCATAGAACCTACCTAGTTTCAGCCCCGATCATC GCCTATTATTACTCGCAGCTGATCGGTGATGCTAAATCCCCGCCAACTTTGCTTGCCGCTGCTTCATTCGACGGG ATGGCTGTCATTGGTAGGCTTGTTGATGGTTGTTGTTTTTGCATCCGGTATGAACTGATTTGTCAGATGCGGATC CATACATCCCGGGTGGCGGTGGTGCCCAGTGGTATATTAATCAGAACAACTTGTACTTATTCTCTCATTTTATCT TTGAAGATTTCTGGCTGACTTCGTATTTAGCTTCCGGTCCGTACGGAATTTCGTGATCGATGTTCGAAGGTACGA CAGCCACCCTACTCATCCCACCTTTCTTTTGAAAGTAACGTTCAATCCTTAGAGTTCCTGCGGAGAAGTCACAAG GAACTGGTCTGCATTGGCAAGTTTCGCAGGCTACTTCTTTGTTCAATATTGTTGTCCATATGTCCACTGCTCCCA ACACGGCACACCAAGGTTTGTTTTTATGTCCAAGTTGTAATATAACAGTACTCAACCACTTACTTTCAGGTATCT TTATGGAAAATGGAAGGTGCGTATCTTTACTATCAACACCAACAGCGTGTTCATTCGCCTTAGTGGTGGGTTCAT GAGTGACTTGGTGTTTAATGGAGGTTCGTCCAAGATCATACGAAGCAGACAAACACTTGTTAACTTAGCACAGGA AAGTTCGGTATCTGGGTTGGAAATCAACAGTATGTGACGCATTCATTTATTTAAGATGACGAAGTAAGATAAATG CAGATTTACTGTCCGCAATATCACCGTCAACAATGCTCAAACGGGTATTTTTGCCATCTGGAATTGGGGTAAGGA GGTTTAGCACAGTCTTAATTTTGCCATTAGCATTCATATGTTCCCAGGTTGGACTTTCCAGGGCGTCACCATCAA TAACTGTGGTGTCGGTTTCGACCTTACGACAGGCGCAACGTCGCCCTCTTCGCAAACAACTGGAGCTGAAGCTAT CATTGACGCTACCATCAACGATACTCCTATTTTCATCAGAAACTCAGAGCCCAGTAACGGTCGACTAGCTGGATC ACTCGTGATCAATAATGCTAGACTCAATAATGTTCCGGTTGCCGTTGGGGTTGCTGGCGGCGGCGTTGTGTTGGC TGGTGGTTCGAAAACGATAGCCAGCTGGGGCCAGGGTAACGTCTTCTCTGGCACCAACCCTAATGGAAGATTCGT ACAAGACAACATTGTGAACGCCCACAAGCCTTCTGTCCTTTTGGACGGGAATGGAAAGATCTTTGGAAAGCCACA TCCTCAATATGCCAATTATGCTGTCAGTCAATTCGTGAGTGTCAAAGACCATGGCGCTCGAGGTGATGGTCGAAC GGACGATACCGCTGCACTCAAGTCGATATTTGACCAGGTTAGTGAATCGTTACCAATAGCTTCGAGTCCCGCCCG GCTCACCCGCGCAATCCATTTAGTTTGCTGGCTGCAAGATTATCTTTTTCGATGCCGGAACCTATATCGTCTCTT CCACCCTGACCATTCCTGCTGGAACTCAGATTGTTGGTGAAGGCTGGTCGACTATTGCTGGGAAGGGATCTGCCT TCCGGGATATGAACAATCCTCAAGTGGTCGTCAGAGTTGGCGCATCCGGGTCGCAGGGAGTGGTCGAGATTACTG ACATGCTATTTACAACAATTGGCCCTGGTGCGTAGCGAATCTCAACTGTTGTGGACTTTGGCCATATCTGACCTC TTATGAAATGCAACAGCCGCTGGTGCGATCGTTGTTGAATGGAATGTCAGACAACCTGATGGACAAAATGGTGGT GCTGGCATGTGGGACACTCATATCAGGTTCGTGTGTTTGTCCAGTATTTGTGGTCGCATTCCTCACTTTCGGACG GTTTGATAGGCTAGGCGGAGTGGCTGGATCCAACTTGCAAACCAGTCAATGTCCCAGTTCCGGAAGCGGTGGAAC GACTAATTGCTTTGCTGCTTTCCTTGCACTACACCTTACATCTCGGTCCACTGCTTACTTGGAGGTCAGTGCGCG GTCACAGTCCTATTTTAAAGTCCAGCATATTCAGAACAATGGCTCCTTCAGGGTACCTGGGTCTGGTTGGCTGAC CATGATCTTGATGGCCCTTCTCAACTCAATCTGTATTCCGGAAGAGGCATCCTTTCCGAATCCGCTGGTCCTGTC TGGTTGATTGCTACAGGTGAGTAACTTTCAACCCAATGATCTATACTGAGCTTGACATATCGACAAGGCTGTGAG TGTATTAAACAAAACGAAGTTCATTAACATTAGTGACGCTTTGAAAAAGCTGAACACCATGTCTTATACCAATAC TCTTTGGTCGGCGCGAAGAATCACTACATGGGTCTCATTCAGACTGAAAGCGTGAGCGATTCTAATTCTTGTAGA CTTGTGACGTTTGTCCTGAATCGCATTGTTTCAAGCCGTATTTCCAACCTAACCCCAGTCCTCCTGCTCCATTCT CCATTGTACCCTCGTTCAGTGATCCGAGCTTCAATGGTGTCCGATCATCTTGGGCACTAACGGTGTCTGGTTCTA CCGATATCATAGTCTTCGGTAAGCCTTGGGTTATTGTTTGTTGATTACAGACATAAACCTATGATCTTGCAGGCG CGGGACTTTACAGCTTCTTCTCGGTCAGATTTTCTTTGTATTGTTGTGGTCCGATCAGTAAGCTAACGATTGCGC AGAACTACAATCAAGATTGCATTACCCCTGCTACGTGCCAAAGTCAAATCTTGAACGTCGATTCGTCATCATCGC TCACGGTGTACAGTTTGTCCACTGTGGCGACTACGTTCCAGCTTAGCGTCAACCAAGCCGGGATTGTCAACCAAG CAGGAAATGTGAATGGTTTCCAATCTACTATGACTGCTTGGAGTCGATGA |