Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|058440
Gene name
Locationscaffold_03a:1436331..1437812
Strand-
Gene length (bp)1481
Transcript length (bp)1254
Coding sequence length (bp)1254
Protein length (aa) 418

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13621 Cupin_8 Cupin-like domain 6.1E-29 181 417
PF08007 JmjC_2 JmjC domain 6.1E-09 308 415
PF02373 JmjC JmjC domain, hydroxylase 2.7E-05 313 417

Swissprot hits

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Swissprot ID Swissprot Description Start End E-value
sp|B5XF11|KDM8_SALSA Lysine-specific demethylase 8 OS=Salmo salar GN=kdm8 PE=2 SV=1 62 417 5.0E-41
sp|A8E534|KDM8_DANRE Lysine-specific demethylase 8 OS=Danio rerio GN=kdm8 PE=2 SV=1 62 417 8.0E-41
sp|Q9CXT6|KDM8_MOUSE Lysine-specific demethylase 8 OS=Mus musculus GN=Kdm8 PE=2 SV=1 31 417 4.0E-40
sp|Q497B8|KDM8_RAT Lysine-specific demethylase 8 OS=Rattus norvegicus GN=Kdm8 PE=2 SV=1 31 417 1.0E-38
sp|Q8N371|KDM8_HUMAN Lysine-specific demethylase 8 OS=Homo sapiens GN=KDM8 PE=1 SV=1 79 417 2.0E-38
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Swissprot ID Swissprot Description Start End E-value
sp|B5XF11|KDM8_SALSA Lysine-specific demethylase 8 OS=Salmo salar GN=kdm8 PE=2 SV=1 62 417 5.0E-41
sp|A8E534|KDM8_DANRE Lysine-specific demethylase 8 OS=Danio rerio GN=kdm8 PE=2 SV=1 62 417 8.0E-41
sp|Q9CXT6|KDM8_MOUSE Lysine-specific demethylase 8 OS=Mus musculus GN=Kdm8 PE=2 SV=1 31 417 4.0E-40
sp|Q497B8|KDM8_RAT Lysine-specific demethylase 8 OS=Rattus norvegicus GN=Kdm8 PE=2 SV=1 31 417 1.0E-38
sp|Q8N371|KDM8_HUMAN Lysine-specific demethylase 8 OS=Homo sapiens GN=KDM8 PE=1 SV=1 79 417 2.0E-38
sp|Q1JP61|KDM8_BOVIN Lysine-specific demethylase 8 OS=Bos taurus GN=KDM8 PE=2 SV=1 31 417 1.0E-37
sp|Q8RWR1|JMJ30_ARATH Putative lysine-specific demethylase JMJD5 OS=Arabidopsis thaliana GN=JMJD5 PE=2 SV=1 62 417 2.0E-36
sp|Q55DF5|JMJCD_DICDI JmjC domain-containing protein D OS=Dictyostelium discoideum GN=jcdD PE=3 SV=1 165 413 1.0E-33
sp|B2GUS6|KDM8_XENTR Lysine-specific demethylase 8 OS=Xenopus tropicalis GN=kdm8 PE=2 SV=1 165 417 5.0E-32
sp|Q54FG7|JMJCF_DICDI JmjC domain-containing protein F OS=Dictyostelium discoideum GN=jcdF PE=3 SV=1 170 417 9.0E-26
sp|P0C872|JMJD7_MOUSE JmjC domain-containing protein 7 OS=Mus musculus GN=Jmjd7 PE=1 SV=1 165 417 1.0E-09
sp|P59723|HIF1N_DANRE Hypoxia-inducible factor 1-alpha inhibitor OS=Danio rerio GN=hif1an PE=2 SV=2 313 417 1.0E-07
sp|Q9NWT6|HIF1N_HUMAN Hypoxia-inducible factor 1-alpha inhibitor OS=Homo sapiens GN=HIF1AN PE=1 SV=2 313 417 4.0E-07
sp|Q8BLR9|HIF1N_MOUSE Hypoxia-inducible factor 1-alpha inhibitor OS=Mus musculus GN=Hif1an PE=1 SV=2 313 417 4.0E-07
sp|Q96EW2|HBAP1_HUMAN HSPB1-associated protein 1 OS=Homo sapiens GN=HSPBAP1 PE=1 SV=1 302 416 5.0E-07
sp|Q6C3P4|TYW4_YARLI tRNA wybutosine-synthesizing protein 4 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=PPM2 PE=3 SV=1 203 416 2.0E-06
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GO

(None)

SignalP

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SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|058440
MEYVCNLLHPHLLRIRSTSPSDDLIIVSEGLYEQLVASVGALLTDALHSRNYMANEFLTLSDIAYEKMRLAPSTT
LTVWQILYADACILHALCILNKPNATRSIGTLDKAIIIAGGGDENRLDLILSCINKIQQIFFPTLVLSRKLLHQG
HHPSPNLLSTAHHEVPTIDTEPSFLSFQEIHSKGPFVIRDYARDWPALKDHKWNSIDYLLSVSGSSRTIPIEVGH
DYRDEDWSQTLMGWEDFLDVIREKVAGDSSFKVAKILYLAQYNLLRQFPSLRNDIAIPDYVYCALSSQDFPEYTA
LRHGDNAILNAWLGPEGATSPAHFDPYYNLYVQIVGYKTVWLSPPNTKPYMEALTLLKRSEDIQTRETTCNFSDF
REKVVPEAMSVVLGPGDLLFFPPGWWHGMRSESTCFSVSMWF*
Coding >Agabi119p4|058440
ATGGAGTACGTCTGCAACCTACTGCACCCTCACCTGCTACGAATCCGCTCTACCTCACCTTCCGACGACCTCATA
ATAGTATCTGAGGGCCTCTATGAACAACTTGTGGCGTCTGTAGGCGCTCTATTAACCGATGCACTTCATTCTAGA
AATTACATGGCGAATGAATTCCTGACATTATCGGACATTGCATATGAAAAGATGCGACTTGCGCCATCGACTACT
CTGACCGTGTGGCAGATTTTGTACGCTGACGCGTGCATCCTGCATGCCCTCTGCATACTGAACAAACCTAATGCA
ACACGATCAATTGGTACTCTTGACAAAGCGATCATTATTGCTGGAGGTGGCGACGAGAATCGCCTTGACCTGATT
TTGTCGTGTATCAATAAGATACAACAAATCTTCTTCCCGACCCTCGTCCTGTCACGAAAACTACTGCATCAGGGA
CATCATCCTTCTCCCAATCTATTATCAACCGCTCATCACGAGGTTCCCACCATTGATACAGAGCCATCTTTTCTT
TCGTTTCAGGAGATTCATTCCAAAGGACCTTTTGTGATCAGGGACTATGCTCGTGATTGGCCCGCATTGAAAGAT
CATAAATGGAACTCCATCGATTATTTGCTATCAGTATCTGGTTCCTCCAGAACCATTCCGATAGAAGTTGGGCAT
GACTACCGGGATGAAGACTGGAGCCAAACGCTAATGGGCTGGGAAGATTTCCTCGATGTAATCAGGGAGAAAGTG
GCTGGCGACAGCTCGTTCAAAGTCGCAAAAATCTTGTATCTTGCTCAGTACAATCTGTTACGGCAATTTCCTTCT
CTACGAAACGACATTGCGATCCCTGATTACGTCTATTGTGCTCTGTCATCCCAAGACTTTCCTGAGTATACAGCA
TTGCGCCACGGTGACAATGCTATTCTAAACGCATGGCTGGGCCCCGAGGGCGCAACATCACCCGCACATTTTGAC
CCCTATTACAACCTCTACGTACAAATTGTCGGCTACAAGACCGTTTGGTTAAGTCCTCCAAACACCAAGCCATAT
ATGGAAGCTTTGACTCTGTTAAAGCGGTCTGAAGATATTCAGACTAGGGAAACCACCTGTAATTTTTCCGATTTC
CGCGAGAAGGTCGTGCCAGAGGCAATGAGTGTAGTATTGGGCCCAGGTGACTTATTGTTCTTCCCGCCCGGTTGG
TGGCATGGGATGCGCAGTGAATCCACTTGTTTCTCAGTATCGATGTGGTTTTGA
Transcript >Agabi119p4|058440
ATGGAGTACGTCTGCAACCTACTGCACCCTCACCTGCTACGAATCCGCTCTACCTCACCTTCCGACGACCTCATA
ATAGTATCTGAGGGCCTCTATGAACAACTTGTGGCGTCTGTAGGCGCTCTATTAACCGATGCACTTCATTCTAGA
AATTACATGGCGAATGAATTCCTGACATTATCGGACATTGCATATGAAAAGATGCGACTTGCGCCATCGACTACT
CTGACCGTGTGGCAGATTTTGTACGCTGACGCGTGCATCCTGCATGCCCTCTGCATACTGAACAAACCTAATGCA
ACACGATCAATTGGTACTCTTGACAAAGCGATCATTATTGCTGGAGGTGGCGACGAGAATCGCCTTGACCTGATT
TTGTCGTGTATCAATAAGATACAACAAATCTTCTTCCCGACCCTCGTCCTGTCACGAAAACTACTGCATCAGGGA
CATCATCCTTCTCCCAATCTATTATCAACCGCTCATCACGAGGTTCCCACCATTGATACAGAGCCATCTTTTCTT
TCGTTTCAGGAGATTCATTCCAAAGGACCTTTTGTGATCAGGGACTATGCTCGTGATTGGCCCGCATTGAAAGAT
CATAAATGGAACTCCATCGATTATTTGCTATCAGTATCTGGTTCCTCCAGAACCATTCCGATAGAAGTTGGGCAT
GACTACCGGGATGAAGACTGGAGCCAAACGCTAATGGGCTGGGAAGATTTCCTCGATGTAATCAGGGAGAAAGTG
GCTGGCGACAGCTCGTTCAAAGTCGCAAAAATCTTGTATCTTGCTCAGTACAATCTGTTACGGCAATTTCCTTCT
CTACGAAACGACATTGCGATCCCTGATTACGTCTATTGTGCTCTGTCATCCCAAGACTTTCCTGAGTATACAGCA
TTGCGCCACGGTGACAATGCTATTCTAAACGCATGGCTGGGCCCCGAGGGCGCAACATCACCCGCACATTTTGAC
CCCTATTACAACCTCTACGTACAAATTGTCGGCTACAAGACCGTTTGGTTAAGTCCTCCAAACACCAAGCCATAT
ATGGAAGCTTTGACTCTGTTAAAGCGGTCTGAAGATATTCAGACTAGGGAAACCACCTGTAATTTTTCCGATTTC
CGCGAGAAGGTCGTGCCAGAGGCAATGAGTGTAGTATTGGGCCCAGGTGACTTATTGTTCTTCCCGCCCGGTTGG
TGGCATGGGATGCGCAGTGAATCCACTTGTTTCTCAGTATCGATGTGGTTTTGA
Gene >Agabi119p4|058440
ATGGAGTACGTCTGCAACCTACTGCACCCTCACCTGCTACGAATCCGCTCTACCTCACCTTCCGACGGTGAGCTT
TAAATGCCTTGATTCAAATGTCTTTGGTACTGAACGCCTGTTGCCAAAAGACCTCATAATAGTATCTGAGGGCCT
CTATGAACAACTTGTGGCGTCTGTAGGCGCTCTATTAACCGATGCACTTCATTCTAGAAATTACATGGCGAATGA
ATTCCTGACATTATCGGACATTGCATATGAAAAGATGCGACTTGCGCCATCGACTACTCTGACCGTGTGGCAGAT
TTTGTACGCTGACGCGTGCATCCTGCATGCCCTCTGCATACTGAACAAACCTAATGCAACACGATCAATTGGTAC
TCTTGACAAAGCGATCATTATTGCTGGAGGTGGCGACGAGAATCGCCTTGACCTGATTTTGTCGTGTATCAATAA
GATACAACAAATCTTCTTCCCGACCCTCGTCCTGTCACGAAAACTACTGCATCAGGGACATCATCCTTCTCCCAA
TCTATTATCAACCGCTCATCACGAGGTTCCCACCATTGATACAGAGCCATCTTTTCTTTCGTTTCAGGAGATTCA
TTCCAAAGGACCTTTTGTGATCAGGGACTATGCTCGTGATTGGCCCGCATTGAAAGATCATAAATGGAACTCCAT
CGATTATTTGCTATCAGTATCTGGTTCCTCCAGAACCATTCCGATAGAAGTTGGGCATGACTACCGGGATGAAGA
CTGGAGCCAAACGCTAATGGGCTGGGAAGATTTCCTCGATGTAATCAGGGAGAAAGTGGCTGGCGACAGCTCGTT
CAAAGTCGCAAAAATCTTGTATCTTGCTCAGTACAATCTGTTACGGCAATTTCCTTCTCTACGAAACGACATTGC
GATCCCTGATTACGTCTATTGTGCTCTGTCATCCCAAGACTTTCCTGAGTATACAGCATTGCGCCACGGTGACAA
TGCTATTCTAAACGCATGGCTGGGCCCCGAGGGCGCAACATCACCCGCACATTTTGTAAGTCGCTCCCGTTTTTT
TACATCTCAGCAACCTATTCTTTCTTAGGACCCCTATTACAACCTCTACGGTGAAGTGATTACATGACTGTCTGA
CCATACGCTGTCCTAATCATTACGTCGCAAACCTAGTACAAATTGTCGGCTACAAGACCGTTTGGTTAAGTCCTC
CAAACACCAAGCCATATATGGAAGCTTTGACTCTGTTAAAGCGGTCTGAAGATATTCAGACTAGTTTGTCAGAGA
GAAACAGTGACTCTCTAAACACGTCTCGCATCGATGTTTTCAATTCAGGGGAAACCACCTGTAATTTTTCCGATT
TCCGCGAGAAGGTCGTGCCAGAGGCAATGAGTGTAGTATTGGGCCCAGGTGACTTATTGTTCTTCCCGCCCGGTT
GGTGGCATGGGATGCGCAGTGAATCCACTTGTTTCTCAGTATCGATGTGGTTTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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