Fungal Genomics

at Utrecht University

General Properties

Protein IDAgabi119p4|057980
Gene name
Locationscaffold_03a:1331687..1334422
Strand-
Gene length (bp)2735
Transcript length (bp)2043
Coding sequence length (bp)2043
Protein length (aa) 681

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04082 Fungal_trans Fungal specific transcription factor domain 1.2E-14 181 417

Swissprot hits

Swissprot ID Swissprot Description Start End E-value
sp|P49412|PRIB_LENED Protein priB OS=Lentinula edodes GN=priB PE=2 SV=1 124 410 8.0E-15

GO

GO Term Description Terminal node
GO:0008270 zinc ion binding Yes
GO:0003677 DNA binding Yes
GO:0006351 transcription, DNA-templated Yes
GO:0006807 nitrogen compound metabolic process No
GO:0046872 metal ion binding No
GO:1901360 organic cyclic compound metabolic process No
GO:0044271 cellular nitrogen compound biosynthetic process No
GO:0044238 primary metabolic process No
GO:0005488 binding No
GO:1901576 organic substance biosynthetic process No
GO:0009059 macromolecule biosynthetic process No
GO:0006725 cellular aromatic compound metabolic process No
GO:0090304 nucleic acid metabolic process No
GO:0046483 heterocycle metabolic process No
GO:0003676 nucleic acid binding No
GO:0097659 nucleic acid-templated transcription No
GO:0044249 cellular biosynthetic process No
GO:0008152 metabolic process No
GO:0032774 RNA biosynthetic process No
GO:0003674 molecular_function No
GO:0019438 aromatic compound biosynthetic process No
GO:0034641 cellular nitrogen compound metabolic process No
GO:0046914 transition metal ion binding No
GO:0006139 nucleobase-containing compound metabolic process No
GO:0043170 macromolecule metabolic process No
GO:1901363 heterocyclic compound binding No
GO:0043167 ion binding No
GO:0044237 cellular metabolic process No
GO:0018130 heterocycle biosynthetic process No
GO:0008150 biological_process No
GO:1901362 organic cyclic compound biosynthetic process No
GO:0071704 organic substance metabolic process No
GO:0016070 RNA metabolic process No
GO:0009987 cellular process No
GO:0009058 biosynthetic process No
GO:0097159 organic cyclic compound binding No
GO:0034654 nucleobase-containing compound biosynthetic process No
GO:0043169 cation binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 40 0.45

Transmembrane Domains

(None)

Transcription Factor Class

Transcription Factor Class
(based on PFAM domains)
Fungal Specific TF

Expression data

No expression data available for this genome

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Agabi119p4|057980
MSTDQRLFRFGGDDSDGIPFDDYIQESDVKDIRSVNRPSGACVDCKSVKVRCEFVPGERKCRRCQAKDLPCTPRE
RKKRKPADTHEQLQEKAHEKDIQIQNLLRQFDQLRTEQKIRLWVEKAHNPEQGQQVGTQTLKWDYKGKSPESAVM
SFFRAPRNASPPLIIKYCSLYPEEIQDLFSLYFERINPFFSLLDSELHTAENLIWSCPFLFTVMCAVASRYYVAR
RDIYPLAMDFARDIAGQMLVDGSQSIDVCQAYLIMAVYPTPRKRWAEDRSWLLMGVAIRMAMELGLNQPPLGMSD
KRQEKQSLNRVRTWLNCYCVDGSHAIQFGKMPMVRLDDYLARTSQIWYRSSSMNSAFDVHLCAYVQILTIMAQWR
NLLNSFDKGNSPETFDIIATSLQTEQRLTQELDTWVAAYKEEYTHNPLPICNYRSNTTQMITAYLRLVVLAAAFQ
HGLKRGLSRQSDVFIKAFDAAKMVISIMVERLYPTGYLRYAMEANFLYVAYAAAFLTNLLRRTLLPLLDEKQQRE
ILFIVPRLIEILSSREVALDGRHTPALYSKFLSSLLERHIARRSPSSSKASDPKFPSSYQHSLDNTATRPPVTFW
PDTGSVDATSLSFIPDYSNGLIFQQSGEAEMDFSLNHFVRTVSQNFPSPFSSTGSMDADIQSLIAPQLPWMPDTQ
DLQSL*
Coding >Agabi119p4|057980
ATGTCAACAGACCAGAGGCTTTTTCGTTTTGGCGGAGACGATAGCGATGGCATTCCATTTGATGATTATATCCAG
GAATCAGACGTGAAGGATATACGTTCCGTGAATAGGCCGTCTGGTGCTTGTGTTGACTGTAAGTCAGTCAAAGTA
CGGTGCGAATTTGTTCCTGGAGAACGGAAATGTAGGCGGTGTCAAGCCAAGGACCTACCATGTACGCCGCGGGAG
CGCAAGAAACGCAAACCAGCAGATACACACGAACAGCTACAGGAAAAGGCACATGAAAAGGATATTCAGATTCAA
AACCTGCTGCGACAGTTCGACCAGCTAAGAACAGAACAAAAAATTCGTCTCTGGGTAGAGAAGGCACACAATCCT
GAACAAGGTCAACAGGTTGGGACTCAGACACTCAAATGGGACTATAAAGGCAAAAGCCCTGAATCTGCGGTCATG
TCGTTTTTCAGGGCGCCACGCAATGCGTCGCCTCCGCTCATTATTAAGTATTGCTCGTTATATCCCGAGGAGATC
CAAGACCTTTTCTCATTGTACTTTGAACGAATAAACCCATTCTTTTCTCTTCTGGATTCCGAATTGCATACCGCA
GAGAACCTCATTTGGTCCTGTCCTTTCCTTTTTACCGTTATGTGTGCTGTTGCGTCACGATATTATGTTGCACGG
CGCGATATTTACCCACTGGCCATGGATTTTGCCAGGGATATTGCTGGACAGATGCTTGTGGATGGAAGTCAAAGT
ATAGACGTTTGTCAGGCATATCTGATAATGGCTGTATATCCAACTCCCCGAAAGAGATGGGCTGAAGATAGAAGT
TGGTTGTTGATGGGTGTTGCTATACGAATGGCCATGGAGCTCGGTCTGAATCAACCTCCGCTCGGAATGTCCGAC
AAGAGACAAGAAAAGCAAAGCCTGAATAGAGTCAGGACGTGGCTCAATTGCTATTGCGTGGATGGTTCACACGCC
ATTCAATTTGGCAAAATGCCTATGGTCAGACTTGACGACTATCTGGCTCGGACTTCGCAAATCTGGTACCGCTCT
TCATCGATGAACAGCGCATTCGATGTGCATCTGTGTGCATATGTCCAAATTCTGACGATAATGGCTCAATGGCGG
AATCTTTTGAATTCATTCGACAAGGGAAATTCGCCTGAGACTTTTGACATCATCGCTACTAGCCTACAAACGGAA
CAAAGACTGACGCAGGAGCTTGATACCTGGGTTGCTGCTTACAAAGAGGAATACACACATAACCCCCTGCCCATC
TGTAATTATCGGTCAAATACTACACAGATGATCACTGCATACCTCCGTCTGGTGGTACTAGCTGCTGCATTCCAA
CACGGGCTCAAGCGCGGTTTATCGCGTCAATCCGACGTATTCATAAAGGCTTTTGATGCCGCGAAGATGGTTATT
TCTATCATGGTAGAACGCTTATACCCAACTGGTTATCTACGTTATGCCATGGAGGCGAATTTCCTTTATGTAGCC
TATGCCGCAGCCTTTTTGACAAATCTATTGCGTCGTACACTCCTCCCGCTTCTAGATGAAAAACAACAGCGAGAG
ATCCTTTTTATTGTGCCTCGGCTGATTGAAATTCTGAGCTCACGAGAAGTCGCCTTGGATGGGAGACACACACCA
GCTCTGTATTCAAAATTCCTCTCGTCCCTTTTGGAGAGACATATTGCCAGGAGATCCCCATCAAGTTCCAAAGCC
TCTGACCCCAAATTTCCATCTTCGTATCAACACAGTTTGGACAATACTGCTACCCGACCGCCCGTCACATTTTGG
CCAGATACCGGTTCCGTCGATGCTACGAGCCTATCTTTCATTCCAGATTATTCAAATGGATTAATTTTCCAGCAA
AGTGGTGAAGCTGAGATGGACTTCAGTCTCAATCACTTCGTGCGGACTGTGTCCCAGAATTTTCCCTCTCCCTTT
TCGTCCACCGGGTCTATGGACGCAGACATACAGTCTTTGATAGCTCCCCAATTACCATGGATGCCTGATACACAG
GATCTGCAGTCTTTGTAA
Transcript >Agabi119p4|057980
ATGTCAACAGACCAGAGGCTTTTTCGTTTTGGCGGAGACGATAGCGATGGCATTCCATTTGATGATTATATCCAG
GAATCAGACGTGAAGGATATACGTTCCGTGAATAGGCCGTCTGGTGCTTGTGTTGACTGTAAGTCAGTCAAAGTA
CGGTGCGAATTTGTTCCTGGAGAACGGAAATGTAGGCGGTGTCAAGCCAAGGACCTACCATGTACGCCGCGGGAG
CGCAAGAAACGCAAACCAGCAGATACACACGAACAGCTACAGGAAAAGGCACATGAAAAGGATATTCAGATTCAA
AACCTGCTGCGACAGTTCGACCAGCTAAGAACAGAACAAAAAATTCGTCTCTGGGTAGAGAAGGCACACAATCCT
GAACAAGGTCAACAGGTTGGGACTCAGACACTCAAATGGGACTATAAAGGCAAAAGCCCTGAATCTGCGGTCATG
TCGTTTTTCAGGGCGCCACGCAATGCGTCGCCTCCGCTCATTATTAAGTATTGCTCGTTATATCCCGAGGAGATC
CAAGACCTTTTCTCATTGTACTTTGAACGAATAAACCCATTCTTTTCTCTTCTGGATTCCGAATTGCATACCGCA
GAGAACCTCATTTGGTCCTGTCCTTTCCTTTTTACCGTTATGTGTGCTGTTGCGTCACGATATTATGTTGCACGG
CGCGATATTTACCCACTGGCCATGGATTTTGCCAGGGATATTGCTGGACAGATGCTTGTGGATGGAAGTCAAAGT
ATAGACGTTTGTCAGGCATATCTGATAATGGCTGTATATCCAACTCCCCGAAAGAGATGGGCTGAAGATAGAAGT
TGGTTGTTGATGGGTGTTGCTATACGAATGGCCATGGAGCTCGGTCTGAATCAACCTCCGCTCGGAATGTCCGAC
AAGAGACAAGAAAAGCAAAGCCTGAATAGAGTCAGGACGTGGCTCAATTGCTATTGCGTGGATGGTTCACACGCC
ATTCAATTTGGCAAAATGCCTATGGTCAGACTTGACGACTATCTGGCTCGGACTTCGCAAATCTGGTACCGCTCT
TCATCGATGAACAGCGCATTCGATGTGCATCTGTGTGCATATGTCCAAATTCTGACGATAATGGCTCAATGGCGG
AATCTTTTGAATTCATTCGACAAGGGAAATTCGCCTGAGACTTTTGACATCATCGCTACTAGCCTACAAACGGAA
CAAAGACTGACGCAGGAGCTTGATACCTGGGTTGCTGCTTACAAAGAGGAATACACACATAACCCCCTGCCCATC
TGTAATTATCGGTCAAATACTACACAGATGATCACTGCATACCTCCGTCTGGTGGTACTAGCTGCTGCATTCCAA
CACGGGCTCAAGCGCGGTTTATCGCGTCAATCCGACGTATTCATAAAGGCTTTTGATGCCGCGAAGATGGTTATT
TCTATCATGGTAGAACGCTTATACCCAACTGGTTATCTACGTTATGCCATGGAGGCGAATTTCCTTTATGTAGCC
TATGCCGCAGCCTTTTTGACAAATCTATTGCGTCGTACACTCCTCCCGCTTCTAGATGAAAAACAACAGCGAGAG
ATCCTTTTTATTGTGCCTCGGCTGATTGAAATTCTGAGCTCACGAGAAGTCGCCTTGGATGGGAGACACACACCA
GCTCTGTATTCAAAATTCCTCTCGTCCCTTTTGGAGAGACATATTGCCAGGAGATCCCCATCAAGTTCCAAAGCC
TCTGACCCCAAATTTCCATCTTCGTATCAACACAGTTTGGACAATACTGCTACCCGACCGCCCGTCACATTTTGG
CCAGATACCGGTTCCGTCGATGCTACGAGCCTATCTTTCATTCCAGATTATTCAAATGGATTAATTTTCCAGCAA
AGTGGTGAAGCTGAGATGGACTTCAGTCTCAATCACTTCGTGCGGACTGTGTCCCAGAATTTTCCCTCTCCCTTT
TCGTCCACCGGGTCTATGGACGCAGACATACAGTCTTTGATAGCTCCCCAATTACCATGGATGCCTGATACACAG
GATCTGCAGTCTTTGTAA
Gene >Agabi119p4|057980
ATGTCAACAGACCAGAGGCTTTTTCGTTTTGGCGGAGACGATAGCGATGGCATTCCATTTGATGATTATATCCAG
GAATCAGACGTGAAGGATATACGTTCCGTGAATAGGCCGTAAGTGTTGTACCGTGTCCTCTTCGTTAATCACTGA
ACCTGGGATCAAGGTCTGGTGCTTGTGTTGACTGTAAGTCAGTCAAAGTGAGCTTTCGCGCCTCCAAGTGGGCCG
GTGTGTTGATCATCTACTAGGTACGGTGCGAATTTGTTCCTGGAGAACGGAAATGTAGGCGGTGTCAAGCCAAGG
ACCTACCATGTACGCCGCGGGAGCGCAAGAAACGCAAACCAGCAGAGTAAGTACACTCGAGTTCTCATTTAACTA
TATGATTGATCATCATCGGTATTGCAGTACACACGAACAGCTACAGGAAAAGGCACATGAAAAGGATATTCAGAT
TCAAAACCTGCTGCGACAGTTCGACCAGCTAAGAACAGAACAAAAAATTCGTCTCTGGGTAGAGAAGGCACACAA
TCCTGGTATGTTTGGTGCGCTCAAAGCTTTCTGCAACTTATTTTCAATAGAACAAGGTCAACAGGTTGGGACTCA
GACACTCAAATGGGACTATAAAGGCAAAAGCCCTGAATCTGCGGTCATGTCGTTTTTCAGGGGTATTTCCCGTCC
AGCACTCGAGCTAGCTCATTCTAACTGCACGTCAGCGCCACGCAATGCGTCGCCTCCGCTCATTATTAAGTATTG
CTCGTTATATCCCGAGGAGATCCAAGACCTTTTCTCATTGTACGTTTATTCTATCATGTATGTCTATCCTATCTG
ATCTTCCTTGCCTTAGGTACTTTGAACGAATAAACGTACGTTGTTTACGGACAATCCAAATCGCCGCCTTGACGT
TTTCTATAGCCATTCTTTTCTCTTCTGGATTCCGAATTGCATACCGCAGAGAACCTCATTTGGTCCTGTCCTTTC
CTTTTTACCGTTAGTATGTGCACTGGTTCCCTATCCGATCATCAACCGAACTCATTTTCGCGAAGTGTGTGCTGT
TGCGTCACGATATTATGTTGCACGGCGCGATATTTACCCACTGGCCATGGATTTTGCCAGGGATATTGCTGGACA
GATGCTTGTGGATGGAAGTCAAAGTATAGACGTTTGTCAGGCATATCTGATAATGGCTGTATATCCAACTCCCCG
AAAGAGATGGGCTGAAGATAGAAGTTGGTTGTTGATGGGTGTTGCTATACGGTAAAATCTAGAGCATCAGATTGG
TGTGCATCACTGACATTTGACCCACAAGAATGGCCATGGAGCTCGGTCTGAATCAACCTCCGCTCGGAATGTCCG
ACAAGAGACAAGAAAAGCAAAGCCTGAATAGAGTCAGGACGTGGCTCAATTGCTATTGCGTGGATGGTTCACACG
CCATTCAATTTGGCAAAATGCCTATGGTCAGACTTGACGACTATCTGGCTCGGACTTCGCAAATCTGGTACCGCT
CTTCATCGATGAACAGCGCATTCGATGTGCATCTGTGTGCATATGTCCAAATTCTGACGATAATGGCTCAATGGC
GGAATCTTTTGAATTCATTCGACAAGGGAAATTCGCCTGAGGTAAGATGCCATCTTGCAACCTCGTAACATGACT
ATTTTTCATTAAACCTTCATCGGGCGGTCTAGACTTTTGACATCATCGCTACTAGCCTACAAACGGAACAAAGAC
TGACGCAGGAGCTTGATACCTGGGTTGCTGCTTACAAAGAGGAATACACACATAACCGTATGCGTTTTCTTGATA
CGCTTTATATTGATGGTCACTGCTTTCCACAGCCCTGCCCATCTGTAATTATCGGTCAAATACTACACAGATGTA
TGTGACTAGATAGGCCCTCCTTTTTTTTGTACGTCGGCTCACTCTCATTTAGGATCACTGCATACCTCCGTCTGG
TGGTACTAGCTGCTGCATTCCAACACGGGCTCAAGCGCGGTTTATCGCGTCAATCCGACGTATTCATAAAGGCTT
TTGATGCCGCGAAGATGGTTATTTCTATCATGGTAGAACGCTTATACCCAACTGGTTATCTACGTTATGCCATGG
AGGCGAATTTCCTTTATGTAGCCTATGCCGCAGCCTTTTTGACAAATGTAGGTGACATGTTTCGTGTCGCTTCTG
GTGCTATCGTCTTAGCCCTTACTGACTTATTTCTTCTCCAGCTATTGCGTCGTACACTCCTCCCGCTTCTAGATG
AAAAACAACAGCGAGAGATCCTTTTTATTGTGCCTCGGCTGATTGAAATTCTGAGCTCACGAGAAGTCGCCTTGG
ATGGGAGACACACACCAGCTCTGTATTCAAAATTCCTCTCGTCCCTTTTGGAGAGACATATTGCCAGGAGATCCC
CATCAAGTTCCAAAGCCTCTGACCCCAAATTTCCATCTTCGTATCAACACAGTTTGGACAATACTGCTACCCGAC
CGCCCGTCACATTTTGGCCAGATACCGGTTCCGTCGATGCTACGAGCCTATCTTTCATTCCAGATTATTCAAATG
GATTAATTTTCCAGCAAAGTGGTGAAGCTGAGATGGACTTCAGTCTCAATCACTTCGTGCGGACTGTGTCCCAGA
ATTTTCCCTCTCCCTTTTCGTCCACCGGGTCTATGGACGCAGACATACAGTCTTTGATAGCTCCCCAATTACCAT
GGATGCCTGATACACAGGATCTGCAGTCTTTGTAA

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