Fungal Genomics

General Properties

Protein ID	Agabi119p4|056350
Gene name
Location	scaffold_03a:934455..935450
Strand	-
Gene length (bp)	995
Transcript length (bp)	882
Coding sequence length (bp)	882
Protein length (aa)	294

Overview

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PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF12937	F-box-like	F-box-like	1.2E-06	62	118

Swissprot hits

(None)

GO

GO Term	Description	Terminal node
GO:0005515	protein binding	Yes
GO:0003674	molecular_function	No
GO:0005488	binding	No

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	3970
Change Orthofinder run	5: Agaricus - all strains

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39|056350
Agaricus bisporus var bisporus H97	AgabiH97|056350
Agaricus bisporus var burnettii H119p4	Agabi119p4|056350 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4|056350 MSSTVQHDELVLAHVDARITLLHHQLAALRDQHISLTLTRERLSAMIVAKRVSNAPMRSLIPELCAHIFSFCVLA EEHHPEPQNIWHICAPVVLSNVCRRWQAMVVHNPLLWTQLCIRLDDNINHLVRAKLWISRSASLPFHLTLRPSTL PPPTGIPESLLQPFMQAIRFLSAHIHRVKSLTIQPGIPVIPLLLSGGALPPMPHLTDLILDTDDKDDPSIVQSPL DAPLLHHLRLRDLTSMRRVLQPSLGHIRTLAITAHKEWSSHKLFSDILSQDRLLAPIKKLTFTLAWDL*
Coding	>Agabi119p4|056350 ATGTCTTCCACCGTCCAGCACGACGAGCTCGTCCTCGCTCACGTCGACGCCCGCATCACTCTCCTCCACCACCAG CTCGCTGCGCTCCGTGATCAGCACATCTCCCTCACTCTCACACGAGAGAGGCTTTCTGCTATGATTGTGGCCAAA CGCGTGTCAAACGCCCCCATGCGCAGCCTCATCCCTGAGTTGTGTGCCCATATCTTCTCCTTTTGCGTCTTGGCA GAGGAACATCACCCTGAACCACAAAATATCTGGCATATTTGTGCCCCAGTTGTCTTGTCGAATGTCTGCCGACGC TGGCAAGCCATGGTTGTACACAACCCGCTCCTATGGACTCAGTTATGTATCCGTCTTGACGACAATATCAACCAC CTTGTCCGCGCAAAACTTTGGATCAGCCGTTCCGCCTCCCTTCCTTTTCATCTCACTCTTCGTCCCTCCACCCTG CCTCCACCGACGGGTATTCCTGAGTCGCTCTTGCAGCCGTTCATGCAGGCCATCCGTTTCCTCAGTGCACACATC CATCGCGTTAAATCCCTTACTATTCAACCTGGGATCCCCGTTATTCCTCTCCTCCTCTCCGGTGGCGCTCTTCCT CCCATGCCTCACCTCACTGACCTCATACTCGACACGGACGACAAAGATGATCCCAGCATTGTGCAATCTCCGTTA GATGCTCCTCTGCTTCATCATCTCAGGCTTCGTGACTTGACCTCCATGCGACGCGTTTTGCAGCCCTCACTGGGC CATATCAGGACTCTAGCCATAACTGCCCATAAAGAATGGTCGAGCCACAAGTTGTTCTCTGATATCCTTTCCCAA GACCGTTTGCTTGCCCCGATTAAAAAACTTACATTTACTTTGGCGTGGGACCTCTGA
Transcript	>Agabi119p4|056350 ATGTCTTCCACCGTCCAGCACGACGAGCTCGTCCTCGCTCACGTCGACGCCCGCATCACTCTCCTCCACCACCAG CTCGCTGCGCTCCGTGATCAGCACATCTCCCTCACTCTCACACGAGAGAGGCTTTCTGCTATGATTGTGGCCAAA CGCGTGTCAAACGCCCCCATGCGCAGCCTCATCCCTGAGTTGTGTGCCCATATCTTCTCCTTTTGCGTCTTGGCA GAGGAACATCACCCTGAACCACAAAATATCTGGCATATTTGTGCCCCAGTTGTCTTGTCGAATGTCTGCCGACGC TGGCAAGCCATGGTTGTACACAACCCGCTCCTATGGACTCAGTTATGTATCCGTCTTGACGACAATATCAACCAC CTTGTCCGCGCAAAACTTTGGATCAGCCGTTCCGCCTCCCTTCCTTTTCATCTCACTCTTCGTCCCTCCACCCTG CCTCCACCGACGGGTATTCCTGAGTCGCTCTTGCAGCCGTTCATGCAGGCCATCCGTTTCCTCAGTGCACACATC CATCGCGTTAAATCCCTTACTATTCAACCTGGGATCCCCGTTATTCCTCTCCTCCTCTCCGGTGGCGCTCTTCCT CCCATGCCTCACCTCACTGACCTCATACTCGACACGGACGACAAAGATGATCCCAGCATTGTGCAATCTCCGTTA GATGCTCCTCTGCTTCATCATCTCAGGCTTCGTGACTTGACCTCCATGCGACGCGTTTTGCAGCCCTCACTGGGC CATATCAGGACTCTAGCCATAACTGCCCATAAAGAATGGTCGAGCCACAAGTTGTTCTCTGATATCCTTTCCCAA GACCGTTTGCTTGCCCCGATTAAAAAACTTACATTTACTTTGGCGTGGGACCTCTGA
Gene	>Agabi119p4|056350 ATGTCTTCCACCGTCCAGCACGACGAGCTCGTCCTCGCTCACGTCGACGCCCGCATCACTCTCCTCCACCACCAG CTCGCTGCGCTCCGTGTTCGTCCAACTCTTTCTTTCTTTCTCTACTCGAGCTAATATCGTATGCAGGATCAGCAC ATCTCCCTCACTCTCACACGAGAGAGGCTTTCTGCTATGATTGTGGCCAAACGCGTGTCAAACGCCCCCATGCGC AGCCTCATCCCTGAGTTGTGTGCCCATATCTTCTCCTTTTGCGTCTTGGCAGAGGAACATCACCCTGAACCACAA AATATCTGGCATATTTGTGCCCCAGTTGTCTTGTCGAATGTCTGCCGACGCTGGCAAGCCATGGTTGTACACAAC CCGCTCCTATGGACTCAGTTATGTATCCGTCTTGACGACAATATCAACCACCTTGTCCGCGCAAAACTTTGGATC AGCCGTTCCGCCTCCCTTCCTTTTCATCTCACTCTTCGTCCCTCCACCCTGCCTCCACCGACGGGTATTCCTGAG TCGCTCTTGCAGCCGTTCATGCAGGCCATCCGTTTCCTCAGTGCACACATCCATCGCGTTAAATCCCTTACTATT CAACCTGGGATCCCCGTTATTCCTCTCCTCCTCTCCGGTGGCGCTCTTCCTCCCATGCCTCACCTCACTGACCTC ATACTCGACACGGACGACAAAGATGATCCCAGCATTGTGCAATCTCCGTTAGATGCTCCTCTGCTTCATCATCTC AGGCTTCGTGACTTGACCTCCATGCGACGCGTTTTGCAGCCCTCACTGGGCCATATCAGGACTCTAGCCATAACT GCCCATAAAGAATGGTCGAGCCACAAGTTGTTCTCTGATATCCTTTCCCAGTGTGTTCAGCTAATTGATTGCACC GTCATGTTCCCTCTCTGTTATACTGCCCCGCCCACAGAGACCGTTTGCTTGCCCCGATTAAAAAACTTACATTTA CTTTGGCGTGGGACCTCTGA