Fungal Genomics

at Utrecht University

General Properties

Protein ID	Agabi119p4\|055910
Gene name
Location	scaffold_03a:833286..834986
Strand	+
Gene length (bp)	1700
Transcript length (bp)	1254
Coding sequence length (bp)	1254
Protein length (aa)	418

Overview

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF18884	TSP3_bac	Bacterial TSP3 repeat	2.5E-05	375	394

Swissprot hits

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|B0XMA2\|PLYC_ASPFC	Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=plyC PE=3 SV=1	1	417	0.0E+00
sp\|Q4WL88\|PLYC_ASPFU	Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=plyC PE=3 SV=1	1	417	0.0E+00
sp\|Q0CLG7\|PLYC_ASPTN	Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=plyC PE=3 SV=1	1	417	0.0E+00
sp\|A1DPF0\|PLYC_NEOFI	Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=plyC PE=3 SV=1	1	417	0.0E+00
sp\|B8NQQ7\|PLYC_ASPFN	Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=plyC PE=3 SV=1	1	417	1.0E-178

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Swissprot ID	Swissprot Description	Start	End	E-value
sp\|B0XMA2\|PLYC_ASPFC	Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) GN=plyC PE=3 SV=1	1	417	0.0E+00
sp\|Q4WL88\|PLYC_ASPFU	Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=plyC PE=3 SV=1	1	417	0.0E+00
sp\|Q0CLG7\|PLYC_ASPTN	Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) GN=plyC PE=3 SV=1	1	417	0.0E+00
sp\|A1DPF0\|PLYC_NEOFI	Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=plyC PE=3 SV=1	1	417	0.0E+00
sp\|B8NQQ7\|PLYC_ASPFN	Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722 / SRRC 167) GN=plyC PE=3 SV=1	1	417	1.0E-178
sp\|Q2UB83\|PLYC_ASPOR	Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) GN=plyC PE=3 SV=1	1	417	3.0E-177
sp\|Q5B297\|PLYC_EMENI	Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=plyC PE=3 SV=1	16	417	5.0E-177
sp\|O65388\|PLY2_ARATH	Putative pectate lyase 2 OS=Arabidopsis thaliana GN=At1g11920 PE=3 SV=2	26	237	3.0E-07
sp\|O65457\|PLY17_ARATH	Putative pectate lyase 17 OS=Arabidopsis thaliana GN=At4g22090 PE=3 SV=1	26	174	7.0E-07

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GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

SignalP signal predicted	Location	Score
Yes	1 - 16	0.997786

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

CAZyme category	E-value	Start	End
PL1_2	4.7E-51	71	246

Secondary Metabolism

(None)

Expression data

No expression data available for this genome

Orthologs

Orthofinder run ID	5
Orthogroup	3933
Change Orthofinder run

Species	Protein ID
Agaricus bisporus var bisporus H39	AgabiH39\|055910
Agaricus bisporus var bisporus H97	AgabiH97\|055910
Agaricus bisporus var burnettii H119p4	Agabi119p4\|055910 (this protein)

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus Download genbank file of locus (reverse complement) The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Agabi119p4\|055910 MKLSICFASLLYLAGSCSGLLAFPGAEGFGAQATGGRGGSVYVVTNLNDSGSGSFRDAVSESNRIVVFAVGGVIN ISSRIVVSSHVTIAGQTAPGQGITVYGNGVSYSGADNTITRYIRYRMGRSGDSGKDTITIADGANMIFDHVSVSW GRDESFSINGDVSNVTISDSIIAQGLETHSCGGLIQTDGGVSIIRTLYIDNKTRNPKVKGVNEFVNNVVYNWGGG GGYIAGDSAGPSHANIMNNVFISGPSTSVTAFTRGNENFHAYVSSNYYDPDRNGVLSGFILSPTTDNYSPIDFQS TRYPYPTVKSLLNPLDALHKVASSAGASKSRDSVDNYLINNELLTYGKVGALISDEKASPINGPGNVEGGTPPRD SDNDGIPDDYETAHGTDPHSNDSARIASNGYANIENYINSLV*
Coding	>Agabi119p4\|055910 ATGAAATTATCGATTTGTTTTGCCTCCCTCTTGTATCTCGCTGGCTCGTGTTCGGGCCTCCTCGCATTTCCAGGA GCTGAAGGCTTCGGGGCCCAAGCCACCGGAGGGCGTGGTGGTTCTGTTTATGTGGTGACCAATCTTAACGATTCT GGGTCTGGCAGCTTTCGCGACGCGGTTTCGGAATCAAATAGGATCGTGGTATTTGCCGTCGGGGGCGTAATCAAT ATCAGTAGTCGCATCGTCGTCAGCAGCCATGTTACTATTGCTGGTCAAACGGCCCCTGGTCAAGGTATTACTGTA TATGGCAATGGTGTCTCCTATTCTGGCGCAGACAACACCATCACTCGCTATATCCGTTACCGAATGGGAAGGTCA GGTGATTCTGGGAAAGATACAATCACAATTGCAGATGGTGCAAACATGATTTTCGATCATGTTAGCGTCTCCTGG GGTCGTGACGAGAGTTTTTCCATCAATGGAGACGTTTCAAATGTTACCATTTCGGACTCCATCATTGCACAGGGC CTCGAGACTCATTCCTGCGGAGGTCTTATACAGACCGACGGGGGTGTGAGTATAATTCGCACTCTGTACATTGAT AACAAAACTCGGAATCCTAAAGTGAAAGGTGTTAATGAGTTTGTCAACAACGTGGTTTATAACTGGGGAGGCGGA GGCGGTTACATTGCCGGGGACTCTGCCGGTCCTTCACACGCCAATATCATGAATAATGTATTCATTAGTGGTCCC TCGACCTCAGTCACTGCTTTCACGCGTGGAAATGAAAACTTCCACGCCTACGTCTCCAGCAATTACTACGATCCT GACAGAAATGGCGTTCTCAGTGGATTTATCCTGTCACCTACGACTGACAACTACTCGCCAATCGATTTCCAATCT ACTCGATACCCTTATCCCACCGTGAAGTCTTTATTAAACCCACTCGATGCGCTCCATAAGGTCGCATCATCCGCT GGTGCTAGCAAATCCCGGGACAGCGTCGATAATTACCTCATCAACAACGAACTCTTAACCTATGGCAAAGTCGGA GCTTTGATCTCAGATGAAAAAGCATCTCCTATAAATGGGCCTGGAAATGTCGAAGGTGGAACGCCACCTCGGGAT AGTGATAATGATGGAATTCCAGATGATTACGAGACCGCCCATGGGACGGATCCCCACTCCAATGACTCTGCAAGG ATCGCTTCCAACGGATATGCGAATATTGAGAACTATATCAACTCTTTGGTGTAG
Transcript	>Agabi119p4\|055910 ATGAAATTATCGATTTGTTTTGCCTCCCTCTTGTATCTCGCTGGCTCGTGTTCGGGCCTCCTCGCATTTCCAGGA GCTGAAGGCTTCGGGGCCCAAGCCACCGGAGGGCGTGGTGGTTCTGTTTATGTGGTGACCAATCTTAACGATTCT GGGTCTGGCAGCTTTCGCGACGCGGTTTCGGAATCAAATAGGATCGTGGTATTTGCCGTCGGGGGCGTAATCAAT ATCAGTAGTCGCATCGTCGTCAGCAGCCATGTTACTATTGCTGGTCAAACGGCCCCTGGTCAAGGTATTACTGTA TATGGCAATGGTGTCTCCTATTCTGGCGCAGACAACACCATCACTCGCTATATCCGTTACCGAATGGGAAGGTCA GGTGATTCTGGGAAAGATACAATCACAATTGCAGATGGTGCAAACATGATTTTCGATCATGTTAGCGTCTCCTGG GGTCGTGACGAGAGTTTTTCCATCAATGGAGACGTTTCAAATGTTACCATTTCGGACTCCATCATTGCACAGGGC CTCGAGACTCATTCCTGCGGAGGTCTTATACAGACCGACGGGGGTGTGAGTATAATTCGCACTCTGTACATTGAT AACAAAACTCGGAATCCTAAAGTGAAAGGTGTTAATGAGTTTGTCAACAACGTGGTTTATAACTGGGGAGGCGGA GGCGGTTACATTGCCGGGGACTCTGCCGGTCCTTCACACGCCAATATCATGAATAATGTATTCATTAGTGGTCCC TCGACCTCAGTCACTGCTTTCACGCGTGGAAATGAAAACTTCCACGCCTACGTCTCCAGCAATTACTACGATCCT GACAGAAATGGCGTTCTCAGTGGATTTATCCTGTCACCTACGACTGACAACTACTCGCCAATCGATTTCCAATCT ACTCGATACCCTTATCCCACCGTGAAGTCTTTATTAAACCCACTCGATGCGCTCCATAAGGTCGCATCATCCGCT GGTGCTAGCAAATCCCGGGACAGCGTCGATAATTACCTCATCAACAACGAACTCTTAACCTATGGCAAAGTCGGA GCTTTGATCTCAGATGAAAAAGCATCTCCTATAAATGGGCCTGGAAATGTCGAAGGTGGAACGCCACCTCGGGAT AGTGATAATGATGGAATTCCAGATGATTACGAGACCGCCCATGGGACGGATCCCCACTCCAATGACTCTGCAAGG ATCGCTTCCAACGGATATGCGAATATTGAGAACTATATCAACTCTTTGGTGTAG
Gene	>Agabi119p4\|055910 ATGAAATTATCGATTTGTTTTGCCTCCCTCTTGTATCTCGCTGGCTCGTGTTCGGGCCTCCTCGCATTTCCAGGA GCTGAAGGCATGTTACATGAGTCTTTCCCCAACTATCCTCAGCTCCAATTTTGAAATAGGCTTCGGGGCCCAAGC CACCGGAGGGCGTGGTGGTTCTGTTTATGTGGTGACCAATCTTAACGATTCTGGGTCTGGCAGCTTTCGCGACGC GGTTTCGGAATCAAATAGGGTATGTTCAAGGAACTATAGGGATTCGTCTCTCAACCCTAATTCTGTCGGAGATCG TGGTATTTGCCGTCGGGGGCGTAATCAATATCAGTAGTCGCATCGTCGTCAGCAGCCATGTTACTATTGCTGGTC AAACGGCCCCTGGTCAAGGTATTACTGTATATGGCAATGGTGTCTCCTATTCTGGCGCAGACAACACCATCACTC GCTATATCCGTTACCGAATGGGAAGGTCAGGTGTGTACATTGTTACGATTCCAGTACACTCCAGTTTTAGTTTAG ATATAACCTACTAGGTGATTCTGGGAAAGATACAATCACAATTGCAGATGGTGCAAACATGATTTTCGATCATGT TAGCGTCTCCTGGGGTCGTGACGAGAGTTTTTCCATCAATGGAGACGTTTCAAATGTTACCATTTCGGACTCCAT CATTGCACAGGGCCTCGAGACTCATTCCTGCGGAGGTCTTATACAGACCGACGGGGGTGTGAGTATAATTCGCAC TCTGTACATTGATAACAAAACTCGGAATCCTAAAGTGAAAGGTGTTAATGAGTTTGTCAACAACGTGGTATGTTT TTCATTGGCGAGATGTCGTTACTTTGACGATATGCATATTCTACAGGTTTATAACTGGGGAGGCGGAGGCGGTTA CATTGCCGGGGACTCTGCCGGTCCTTCACACGCCAATATCATGAATAATGTATTCATTAGTGGTCCCTCGACCTC AGTCACTGCTTGTAAATGGCGTCTAATCCTTCATTGCACTGCTGCTCACCCGAACCTTTCTTTTTTTTATAAAGT CACGCGTGGAAATGAAAACTTCCACGCCTACGTCTCCAGCAATTACTACGATCCTGACAGAGTATGAGGCAATCA TGAATTGACCAACCAACAAAAGCTGAATGAACTCATAGAATGGCGTTCTCAGTGGATTTATCCTGTCACCTACGA CTGACAACTACTCGCCAATCGATTTCCAATCTACTCGATACCCTTATCCCACCGTGAAGTCTTTATTAAACCCAC TCGATGCGCTCCATAAGGTCGCATCATCCGCTGGTGCTAGCAAATCCCGGGACAGCGTCGATAATTACCTCATCA ACAACGAACTCTTAACCTATGGCAAAGTCGGAGCTTTGATCTCAGATGAAAAAGCATCTCCTATAAATGGGCCTG GAAATGTCGAAGGTGGAACGGTGAGCCGCTTCTTCTCCTCAAAAAACGTATATAAGTAAATGCTGAATATTTTCC CCAGCCACCTCGGGATAGTGATAATGATGGAATTCCAGATGATTACGAGACCGCCCATGGGACGGATCCCCACTC CAATGACTCTGCAAGGATCGCTTCCAACGGATATGCGAGTACGGTTTTTGACACATAATGCATTTGTCTACATTT ACTGACTACTAGCTATAGATATTGAGAACTATATCAACTCTTTGGTGTAG

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